RNA–Protein interactions for RNA: ENST00000433272.6

LRIG3-203, Transcript of leucine rich repeats and immunoglobulin like domains 3, humanhuman

TSL 1 (best)

Gene LRIG3, Length 3,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG3-203ENST00000433272 NISCHQ9Y2I1 1504 aa30.89■■■□□ 2.54
LRIG3-203ENST00000433272 SHROOM4Q9ULL8 1493 aa27.67■■■□□ 2.02
LRIG3-203ENST00000433272 DCAF8L2P0C7V8 631 aa27.49■■□□□ 1.99
LRIG3-203ENST00000433272 SUPT5HO00267 1087 aaKnown RBP27.28■■□□□ 1.96
LRIG3-203ENST00000433272 PCGF6Q9BYE7 350 aa26.22■■□□□ 1.79
LRIG3-203ENST00000433272 ZCCHC6Q5VYS8 1495 aaKnown RBP25.97■■□□□ 1.75
LRIG3-203ENST00000433272 HRCP23327 699 aa25.94■■□□□ 1.74
LRIG3-203ENST00000433272 PPARGC1BQ86YN6 1023 aaKnown RBP25.92■■□□□ 1.74
LRIG3-203ENST00000433272 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
LRIG3-203ENST00000433272 CCDC180Q9P1Z9 1646 aa25.71■■□□□ 1.71
LRIG3-203ENST00000433272 EHMT2Q96KQ7 1210 aa25.65■■□□□ 1.7
LRIG3-203ENST00000433272 LOC105371045A0A1W2PR82 267 aa25.5■■□□□ 1.67
LRIG3-203ENST00000433272 FAM9AQ8IZU1 332 aaPredicted RBP25.43■■□□□ 1.66
LRIG3-203ENST00000433272 MYO15BQ96JP2 1530 aa25.4■■□□□ 1.66
LRIG3-203ENST00000433272 TRIM41Q8WV44 630 aa25.13■■□□□ 1.61
LRIG3-203ENST00000433272 ABCC9O60706 1549 aa25.1■■□□□ 1.61
LRIG3-203ENST00000433272 SCRIBQ14160 1630 aa24.99■■□□□ 1.59
LRIG3-203ENST00000433272 TRIM26Q12899 539 aaPredicted RBP24.94■■□□□ 1.58
LRIG3-203ENST00000433272 DCAF1Q9Y4B6 1507 aa24.79■■□□□ 1.56
LRIG3-203ENST00000433272 TTBK1Q5TCY1 1321 aaPredicted RBP24.73■■□□□ 1.55
LRIG3-203ENST00000433272 PELP1Q8IZL8 1130 aaKnown RBP24.68■■□□□ 1.54
LRIG3-203ENST00000433272 RSF1Q96T23 1441 aaPredicted RBP24.67■■□□□ 1.54
LRIG3-203ENST00000433272 ZEB1P37275 1124 aaPredicted RBP24.63■■□□□ 1.53
LRIG3-203ENST00000433272 SCAF1Q9H7N4 1312 aaKnown RBP24.49■■□□□ 1.51
LRIG3-203ENST00000433272 CCER1Q8TC90 406 aaPredicted RBP24.46■■□□□ 1.51
LRIG3-203ENST00000433272 CECR2Q9BXF3 1484 aa24.45■■□□□ 1.5
LRIG3-203ENST00000433272 PABPN1Q86U42 306 aaKnown RBP eCLIP24.42■■□□□ 1.5
LRIG3-203ENST00000433272 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
LRIG3-203ENST00000433272 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.37■■□□□ 1.49
LRIG3-203ENST00000433272 YTHDC1Q96MU7 727 aaKnown RBP24.27■■□□□ 1.48
LRIG3-203ENST00000433272 RANGAP1P46060 587 aaPredicted RBP24.25■■□□□ 1.47
LRIG3-203ENST00000433272 MROH2BQ7Z745 1585 aa24.2■■□□□ 1.46
LRIG3-203ENST00000433272 UBTFP17480 764 aaKnown RBP24.19■■□□□ 1.46
LRIG3-203ENST00000433272 CENPBP07199 599 aaPredicted RBP24.18■■□□□ 1.46
LRIG3-203ENST00000433272 GTF3C3Q9Y5Q9 886 aa24.15■■□□□ 1.46
LRIG3-203ENST00000433272 NACADO15069 1562 aa24.12■■□□□ 1.45
LRIG3-203ENST00000433272 NEUROD1Q13562 356 aa24.08■■□□□ 1.45
LRIG3-203ENST00000433272 DIEXFQ68CQ4 756 aaKnown RBP24.04■■□□□ 1.44
LRIG3-203ENST00000433272 ACIN1Q9UKV3 1341 aaKnown RBP24.03■■□□□ 1.44
LRIG3-203ENST00000433272 WIZO95785 1651 aa24.03■■□□□ 1.44
LRIG3-203ENST00000433272 ABCC8Q09428 1581 aa23.77■■□□□ 1.4
LRIG3-203ENST00000433272 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
LRIG3-203ENST00000433272 CSRNP3Q8WYN3 585 aa23.73■■□□□ 1.39
LRIG3-203ENST00000433272 APLP2Q06481 763 aa23.72■■□□□ 1.39
LRIG3-203ENST00000433272 HNRNPUL2Q1KMD3 747 aaKnown RBP23.71■■□□□ 1.39
LRIG3-203ENST00000433272 CCDC88BA6NC98 1476 aa23.67■■□□□ 1.38
LRIG3-203ENST00000433272 SOGA1O94964 1423 aa23.65■■□□□ 1.38
LRIG3-203ENST00000433272 MYT1Q01538 1121 aa23.6■■□□□ 1.37
LRIG3-203ENST00000433272 CEP162Q5TB80 1403 aa23.5■■□□□ 1.35
LRIG3-203ENST00000433272 RUSC2Q8N2Y8 1516 aa23.47■■□□□ 1.35
LRIG3-203ENST00000433272 SMARCA4P51532 1647 aa23.45■■□□□ 1.34
LRIG3-203ENST00000433272 ZNF316A6NFI3 1004 aaPredicted RBP23.45■■□□□ 1.34
LRIG3-203ENST00000433272 TOP2AP11388 1531 aaKnown RBP23.44■■□□□ 1.34
LRIG3-203ENST00000433272 WRNQ14191 1432 aaPredicted RBP eCLIP23.37■■□□□ 1.33
LRIG3-203ENST00000433272 MIER1Q8N108 512 aa23.35■■□□□ 1.33
LRIG3-203ENST00000433272 SMARCA2P51531 1590 aa23.34■■□□□ 1.33
LRIG3-203ENST00000433272 ITGAEP38570 1179 aa23.34■■□□□ 1.33
LRIG3-203ENST00000433272 ATP1B4Q9UN42 357 aaPredicted RBP23.3■■□□□ 1.32
LRIG3-203ENST00000433272 TNIKQ9UKE5 1360 aa23.28■■□□□ 1.32
LRIG3-203ENST00000433272 BAZ1BQ9UIG0 1483 aaKnown RBP23.22■■□□□ 1.31
LRIG3-203ENST00000433272 GOLGA3Q08378 1498 aa23.19■■□□□ 1.3
LRIG3-203ENST00000433272 CLIP1P30622 1438 aa23.16■■□□□ 1.3
LRIG3-203ENST00000433272 UNC13AQ9UPW8 1703 aa23.14■■□□□ 1.29
LRIG3-203ENST00000433272 EEA1Q15075 1411 aa23.12■■□□□ 1.29
LRIG3-203ENST00000433272 BCANQ96GW7 911 aa23.12■■□□□ 1.29
LRIG3-203ENST00000433272 ATAD2BQ9ULI0 1458 aa23.07■■□□□ 1.28
LRIG3-203ENST00000433272 BICRAQ9NZM4 1560 aa23.03■■□□□ 1.28
LRIG3-203ENST00000433272 EIF4G1Q04637 1599 aaKnown RBP23.02■■□□□ 1.28
LRIG3-203ENST00000433272 CEP164Q9UPV0 1460 aa23.02■■□□□ 1.28
LRIG3-203ENST00000433272 P3H3Q8IVL6 736 aa23.01■■□□□ 1.27
LRIG3-203ENST00000433272 RAPGEF2Q9Y4G8 1499 aa22.97■■□□□ 1.27
LRIG3-203ENST00000433272 SYNJ1O43426 1573 aa22.93■■□□□ 1.26
LRIG3-203ENST00000433272 KANK4Q5T7N3 995 aaPredicted RBP22.86■■□□□ 1.25
LRIG3-203ENST00000433272 FAM50AQ14320 339 aaKnown RBP22.82■■□□□ 1.24
LRIG3-203ENST00000433272 VPS8Q8N3P4 1428 aa22.82■■□□□ 1.24
LRIG3-203ENST00000433272 SUPT16HQ9Y5B9 1047 aaKnown RBP22.74■■□□□ 1.23
LRIG3-203ENST00000433272 NEFLP07196 543 aa22.73■■□□□ 1.23
LRIG3-203ENST00000433272 KIF27Q86VH2 1401 aa22.69■■□□□ 1.22
LRIG3-203ENST00000433272 FKBP8Q14318 412 aa22.64■■□□□ 1.22
LRIG3-203ENST00000433272 ERICH6Q7L0X2 663 aa22.6■■□□□ 1.21
LRIG3-203ENST00000433272 CUX2O14529 1486 aa22.59■■□□□ 1.21
LRIG3-203ENST00000433272 KIF21BO75037 1637 aa22.58■■□□□ 1.2
LRIG3-203ENST00000433272 ARID3CA6NKF2 412 aa22.56■■□□□ 1.2
LRIG3-203ENST00000433272 PEG3Q9GZU2 1588 aa22.56■■□□□ 1.2
LRIG3-203ENST00000433272 HIRIP3Q9BW71 556 aaPredicted RBP22.56■■□□□ 1.2
LRIG3-203ENST00000433272 DDX10Q13206 875 aaKnown RBP22.53■■□□□ 1.2
LRIG3-203ENST00000433272 KCNH8Q96L42 1107 aa22.53■■□□□ 1.2
LRIG3-203ENST00000433272 TSHZ2Q9NRE2 1034 aa22.52■■□□□ 1.2
LRIG3-203ENST00000433272 TRIM52Q96A61 297 aa22.51■■□□□ 1.19
LRIG3-203ENST00000433272 ANP32EQ9BTT0 268 aa22.51■■□□□ 1.19
LRIG3-203ENST00000433272 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
LRIG3-203ENST00000433272 CARMIL1Q5VZK9 1371 aa22.46■■□□□ 1.19
LRIG3-203ENST00000433272 CUX1P39880 1505 aa22.46■■□□□ 1.19
LRIG3-203ENST00000433272 NCAPD3P42695 1498 aa22.46■■□□□ 1.19
LRIG3-203ENST00000433272 ARAP1Q96P48 1450 aa22.46■■□□□ 1.19
LRIG3-203ENST00000433272 CCNB3Q8WWL7 1395 aa22.42■■□□□ 1.18
LRIG3-203ENST00000433272 SIN3AQ96ST3 1273 aa22.42■■□□□ 1.18
LRIG3-203ENST00000433272 PRXQ9BXM0 1461 aa22.39■■□□□ 1.17
LRIG3-203ENST00000433272 CNGB1Q14028 1251 aaPredicted RBP22.38■■□□□ 1.17
LRIG3-203ENST00000433272 DHX57Q6P158 1386 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms