RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 FHOD3Q2V2M9 1422 aa16.41■□□□□ 0.22
CLDN4-202ENST00000431918 CHIC2Q9UKJ5 165 aa16.4■□□□□ 0.22
CLDN4-202ENST00000431918 ERICH3Q5RHP9 1530 aa16.38■□□□□ 0.21
CLDN4-202ENST00000431918 PDS5BQ9NTI5 1447 aa16.37■□□□□ 0.21
CLDN4-202ENST00000431918 ARHGAP35Q9NRY4 1499 aa16.36■□□□□ 0.21
CLDN4-202ENST00000431918 FHAD1B1AJZ9 1412 aa16.36■□□□□ 0.21
CLDN4-202ENST00000431918 BIVM-ERCC5R4GMW8 1640 aa16.35■□□□□ 0.21
CLDN4-202ENST00000431918 SIN3AQ96ST3 1273 aa16.34■□□□□ 0.21
CLDN4-202ENST00000431918 HIRIP3Q9BW71 556 aaPredicted RBP16.33■□□□□ 0.2
CLDN4-202ENST00000431918 RRP7BPQ9NSQ0 103 aa16.3■□□□□ 0.2
CLDN4-202ENST00000431918 ZNF777Q9ULD5 760 aaPredicted RBP16.3■□□□□ 0.2
CLDN4-202ENST00000431918 CHMP7Q8WUX9 453 aaPredicted RBP16.28■□□□□ 0.2
CLDN4-202ENST00000431918 POLA1P09884 1462 aaPredicted RBP16.28■□□□□ 0.2
CLDN4-202ENST00000431918 TOPBP1Q92547 1522 aa16.28■□□□□ 0.2
CLDN4-202ENST00000431918 RAB3GAP2Q9H2M9 1393 aa16.27■□□□□ 0.2
CLDN4-202ENST00000431918 DHX57Q6P158 1386 aaKnown RBP16.27■□□□□ 0.19
CLDN4-202ENST00000431918 CNGB1Q14028 1251 aaPredicted RBP16.26■□□□□ 0.19
CLDN4-202ENST00000431918 DDX10Q13206 875 aaKnown RBP16.25■□□□□ 0.19
CLDN4-202ENST00000431918 POLR3GLQ9BT43 218 aa16.23■□□□□ 0.19
CLDN4-202ENST00000431918 CLSPNQ9HAW4 1339 aa16.22■□□□□ 0.19
CLDN4-202ENST00000431918 ERCC6Q03468 1493 aa16.21■□□□□ 0.19
CLDN4-202ENST00000431918 GAPVD1Q14C86 1478 aa16.21■□□□□ 0.19
CLDN4-202ENST00000431918 TONSLQ96HA7 1378 aa16.21■□□□□ 0.19
CLDN4-202ENST00000431918 PHLDB1Q86UU1 1377 aa16.21■□□□□ 0.18
CLDN4-202ENST00000431918 SETD5Q9C0A6 1442 aa16.2■□□□□ 0.18
CLDN4-202ENST00000431918 CDK11AQ9UQ88 783 aaPredicted RBP16.19■□□□□ 0.18
CLDN4-202ENST00000431918 FMN1Q68DA7 1419 aa16.18■□□□□ 0.18
CLDN4-202ENST00000431918 DNMBPQ6XZF7 1577 aa16.17■□□□□ 0.18
CLDN4-202ENST00000431918 AQRO60306 1485 aaKnown RBP eCLIP16.16■□□□□ 0.18
CLDN4-202ENST00000431918 ZNF326Q5BKZ1 582 aaKnown RBP16.16■□□□□ 0.18
CLDN4-202ENST00000431918 LRRC9Q6ZRR7 1453 aa16.15■□□□□ 0.18
CLDN4-202ENST00000431918 RRBP1Q9P2E9 1410 aaKnown RBP16.13■□□□□ 0.17
CLDN4-202ENST00000431918 BCL11AQ9H165 835 aa16.12■□□□□ 0.17
CLDN4-202ENST00000431918 ABCA10Q8WWZ4 1543 aa16.12■□□□□ 0.17
CLDN4-202ENST00000431918 URB2Q14146 1524 aaKnown RBP16.11■□□□□ 0.17
CLDN4-202ENST00000431918 ANP32CO43423 234 aa16.09■□□□□ 0.17
CLDN4-202ENST00000431918 TIAM1Q13009 1591 aa16.07■□□□□ 0.16
CLDN4-202ENST00000431918 MYT1LQ9UL68 1186 aa16.06■□□□□ 0.16
CLDN4-202ENST00000431918 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
CLDN4-202ENST00000431918 FOXD1Q16676 465 aa16.04■□□□□ 0.16
CLDN4-202ENST00000431918 CASKIN1Q8WXD9 1431 aa16.04■□□□□ 0.16
CLDN4-202ENST00000431918 NEFLP07196 543 aa16.04■□□□□ 0.16
CLDN4-202ENST00000431918 CFDP1Q9UEE9 299 aaPredicted RBP16.03■□□□□ 0.16
CLDN4-202ENST00000431918 BCANQ96GW7 911 aa16.02■□□□□ 0.16
CLDN4-202ENST00000431918 PCF11O94913 1555 aaKnown RBP16.02■□□□□ 0.15
CLDN4-202ENST00000431918 SLC4A1APQ9BWU0 796 aaKnown RBP16.01■□□□□ 0.15
CLDN4-202ENST00000431918 FGD6Q6ZV73 1430 aa15.99■□□□□ 0.15
CLDN4-202ENST00000431918 PLEKHD1A6NEE1 506 aa15.99■□□□□ 0.15
CLDN4-202ENST00000431918 FYCO1Q9BQS8 1478 aa15.98■□□□□ 0.15
CLDN4-202ENST00000431918 EFCAB5A4FU69 1503 aa15.95■□□□□ 0.14
CLDN4-202ENST00000431918 PPP1R15AO75807 674 aaPredicted RBP15.95■□□□□ 0.14
CLDN4-202ENST00000431918 PRDM2Q13029 1718 aa15.95■□□□□ 0.14
CLDN4-202ENST00000431918 MRC2Q9UBG0 1479 aa15.94■□□□□ 0.14
CLDN4-202ENST00000431918 JPH4Q96JJ6 628 aa15.93■□□□□ 0.14
CLDN4-202ENST00000431918 NCOA2Q15596 1464 aa15.93■□□□□ 0.14
CLDN4-202ENST00000431918 KCNH8Q96L42 1107 aa15.93■□□□□ 0.14
CLDN4-202ENST00000431918 TSPY4P0CV99 314 aa15.92■□□□□ 0.14
CLDN4-202ENST00000431918 TSPY10P0CW01 314 aa15.92■□□□□ 0.14
CLDN4-202ENST00000431918 GRIN2BQ13224 1484 aa15.92■□□□□ 0.14
CLDN4-202ENST00000431918 ZNF644Q9H582 1327 aaPredicted RBP15.92■□□□□ 0.14
CLDN4-202ENST00000431918 CUL7Q14999 1698 aa15.91■□□□□ 0.14
CLDN4-202ENST00000431918 CCDC18Q5T9S5 1454 aa15.91■□□□□ 0.14
CLDN4-202ENST00000431918 MYOM3Q5VTT5 1437 aa15.91■□□□□ 0.14
CLDN4-202ENST00000431918 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.9■□□□□ 0.14
CLDN4-202ENST00000431918 MPHOSPH9Q99550 1183 aa15.89■□□□□ 0.13
CLDN4-202ENST00000431918 ZNF608Q9ULD9 1512 aaPredicted RBP15.89■□□□□ 0.13
CLDN4-202ENST00000431918 KDM2AQ9Y2K7 1162 aa15.88■□□□□ 0.13
CLDN4-202ENST00000431918 TIMELESSQ9UNS1 1208 aa15.88■□□□□ 0.13
CLDN4-202ENST00000431918 EIF4G2P78344 907 aaKnown RBP eCLIP15.87■□□□□ 0.13
CLDN4-202ENST00000431918 MAP3K1Q13233 1512 aa15.85■□□□□ 0.13
CLDN4-202ENST00000431918 KIF21AQ7Z4S6 1674 aa15.84■□□□□ 0.13
CLDN4-202ENST00000431918 CARMIL2Q6F5E8 1435 aa15.84■□□□□ 0.13
CLDN4-202ENST00000431918 SNAPC4Q5SXM2 1469 aa15.84■□□□□ 0.13
CLDN4-202ENST00000431918 HNRNPUQ00839 825 aaKnown RBP eCLIP15.83■□□□□ 0.12
CLDN4-202ENST00000431918 CDK13Q14004 1512 aaKnown RBP15.83■□□□□ 0.12
CLDN4-202ENST00000431918 PRKCSHP14314 528 aaPredicted RBP15.82■□□□□ 0.12
CLDN4-202ENST00000431918 IFT140Q96RY7 1462 aa15.82■□□□□ 0.12
CLDN4-202ENST00000431918 FKBP8Q14318 412 aa15.81■□□□□ 0.12
CLDN4-202ENST00000431918 L3MBTL2Q969R5 705 aa15.81■□□□□ 0.12
CLDN4-202ENST00000431918 HSPA5P11021 654 aaKnown RBP15.8■□□□□ 0.12
CLDN4-202ENST00000431918 FAM9BQ8IZU0 186 aa15.8■□□□□ 0.12
CLDN4-202ENST00000431918 IQGAP2Q13576 1575 aa15.78■□□□□ 0.12
CLDN4-202ENST00000431918 ERICH6Q7L0X2 663 aa15.78■□□□□ 0.12
CLDN4-202ENST00000431918 UACAQ9BZF9 1416 aa15.77■□□□□ 0.12
CLDN4-202ENST00000431918 PKD2Q13563 968 aa15.77■□□□□ 0.11
CLDN4-202ENST00000431918 RGL3Q3MIN7 710 aa15.77■□□□□ 0.11
CLDN4-202ENST00000431918 CTTNBP2Q8WZ74 1663 aa15.77■□□□□ 0.11
CLDN4-202ENST00000431918 HNRNPMP52272 730 aaKnown RBP eCLIP15.76■□□□□ 0.11
CLDN4-202ENST00000431918 EPRSP07814 1512 aaKnown RBP15.76■□□□□ 0.11
CLDN4-202ENST00000431918 WDR97A6NE52 1622 aa15.76■□□□□ 0.11
CLDN4-202ENST00000431918 PTPRKQ15262 1439 aa15.76■□□□□ 0.11
CLDN4-202ENST00000431918 SENP3-EIF4A1A0A087X0R7 540 aa15.75■□□□□ 0.11
CLDN4-202ENST00000431918 EHBP1L1Q8N3D4 1523 aa15.75■□□□□ 0.11
CLDN4-202ENST00000431918 HFM1A2PYH4 1435 aa15.74■□□□□ 0.11
CLDN4-202ENST00000431918 NAIPQ13075 1403 aa15.74■□□□□ 0.11
CLDN4-202ENST00000431918 PRG4Q92954 1404 aaPredicted RBP15.73■□□□□ 0.11
CLDN4-202ENST00000431918 MAPKBP1O60336 1514 aa15.73■□□□□ 0.11
CLDN4-202ENST00000431918 ANP32EQ9BTT0 268 aa15.72■□□□□ 0.11
CLDN4-202ENST00000431918 MRS2Q9HD23 443 aa15.72■□□□□ 0.11
CLDN4-202ENST00000431918 SUPT6HQ7KZ85 1726 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms