RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 CARMIL1Q5VZK9 1371 aa7.17□□□□□ -1.26
UBE4A-202ENST00000431736 BCANQ96GW7 911 aa7.14□□□□□ -1.27
UBE4A-202ENST00000431736 TNIKQ9UKE5 1360 aa7.13□□□□□ -1.27
UBE4A-202ENST00000431736 MLECQ14165 292 aa7.13□□□□□ -1.27
UBE4A-202ENST00000431736 GOLGA3Q08378 1498 aa7.12□□□□□ -1.27
UBE4A-202ENST00000431736 SCAF1Q9H7N4 1312 aaKnown RBP7.12□□□□□ -1.27
UBE4A-202ENST00000431736 ZNF777Q9ULD5 760 aaPredicted RBP7.12□□□□□ -1.27
UBE4A-202ENST00000431736 EIF4G3O43432 1585 aaKnown RBP7.12□□□□□ -1.27
UBE4A-202ENST00000431736 CSRNP3Q8WYN3 585 aa7.11□□□□□ -1.27
UBE4A-202ENST00000431736 STAG3Q9UJ98 1225 aa7.11□□□□□ -1.27
UBE4A-202ENST00000431736 WDR97A6NE52 1622 aa7.09□□□□□ -1.27
UBE4A-202ENST00000431736 GRIN2AQ12879 1464 aa7.09□□□□□ -1.27
UBE4A-202ENST00000431736 POGZQ7Z3K3 1410 aa7.09□□□□□ -1.27
UBE4A-202ENST00000431736 TEX14Q8IWB6 1497 aa7.09□□□□□ -1.27
UBE4A-202ENST00000431736 RIMBP3CA6NJZ7 1639 aa7.08□□□□□ -1.28
UBE4A-202ENST00000431736 RIMBP3BA6NNM3 1639 aa7.08□□□□□ -1.28
UBE4A-202ENST00000431736 RIMBP3Q9UFD9 1639 aa7.08□□□□□ -1.28
UBE4A-202ENST00000431736 ABCA10Q8WWZ4 1543 aa7.07□□□□□ -1.28
UBE4A-202ENST00000431736 PLB1Q6P1J6 1458 aa7.06□□□□□ -1.28
UBE4A-202ENST00000431736 DMRT2Q9Y5R5 561 aa7.06□□□□□ -1.28
UBE4A-202ENST00000431736 EFCAB2Q5VUJ9 269 aa7.05□□□□□ -1.28
UBE4A-202ENST00000431736 CLIP1P30622 1438 aa7.05□□□□□ -1.28
UBE4A-202ENST00000431736 ARAP1Q96P48 1450 aa7.03□□□□□ -1.28
UBE4A-202ENST00000431736 RAPGEF2Q9Y4G8 1499 aa7.03□□□□□ -1.28
UBE4A-202ENST00000431736 CUX1P39880 1505 aa7.03□□□□□ -1.28
UBE4A-202ENST00000431736 KIAA0586Q9BVV6 1533 aa7.03□□□□□ -1.28
UBE4A-202ENST00000431736 PHF23Q9BUL5 403 aaPredicted RBP7.03□□□□□ -1.28
UBE4A-202ENST00000431736 PRDM2Q13029 1718 aa7.03□□□□□ -1.28
UBE4A-202ENST00000431736 ERICH3Q5RHP9 1530 aa7.02□□□□□ -1.29
UBE4A-202ENST00000431736 EEA1Q15075 1411 aa7.01□□□□□ -1.29
UBE4A-202ENST00000431736 UACAQ9BZF9 1416 aa7.01□□□□□ -1.29
UBE4A-202ENST00000431736 TSPY4P0CV99 314 aa7.01□□□□□ -1.29
UBE4A-202ENST00000431736 TSPY10P0CW01 314 aa7.01□□□□□ -1.29
UBE4A-202ENST00000431736 CHD1O14646 1710 aa7□□□□□ -1.29
UBE4A-202ENST00000431736 C14orf37Q86TY3 774 aa7□□□□□ -1.29
UBE4A-202ENST00000431736 CD109Q6YHK3 1445 aa6.98□□□□□ -1.29
UBE4A-202ENST00000431736 FOXD1Q16676 465 aa6.98□□□□□ -1.29
UBE4A-202ENST00000431736 PHLDB1Q86UU1 1377 aa6.97□□□□□ -1.29
UBE4A-202ENST00000431736 IGF1RP08069 1367 aa6.97□□□□□ -1.29
UBE4A-202ENST00000431736 PPP1R15AO75807 674 aaPredicted RBP6.96□□□□□ -1.29
UBE4A-202ENST00000431736 MTUS2Q5JR59 1369 aa6.96□□□□□ -1.3
UBE4A-202ENST00000431736 HDGFP51858 240 aaKnown RBP6.96□□□□□ -1.3
UBE4A-202ENST00000431736 CFDP1Q9UEE9 299 aaPredicted RBP6.95□□□□□ -1.3
UBE4A-202ENST00000431736 TOP2BQ02880 1626 aa6.95□□□□□ -1.3
UBE4A-202ENST00000431736 NUP160Q12769 1436 aa6.95□□□□□ -1.3
UBE4A-202ENST00000431736 ASXL2Q76L83 1435 aa6.95□□□□□ -1.3
UBE4A-202ENST00000431736 CEP170Q5SW79 1584 aa6.95□□□□□ -1.3
UBE4A-202ENST00000431736 KDM6BO15054 1643 aa6.94□□□□□ -1.3
UBE4A-202ENST00000431736 ADAMTS12P58397 1594 aa6.94□□□□□ -1.3
UBE4A-202ENST00000431736 CUL7Q14999 1698 aa6.94□□□□□ -1.3
UBE4A-202ENST00000431736 AKNAQ7Z591 1439 aa6.93□□□□□ -1.3
UBE4A-202ENST00000431736 CHGAP10645 457 aaKnown RBP6.93□□□□□ -1.3
UBE4A-202ENST00000431736 TARBP1Q13395 1621 aaKnown RBP6.93□□□□□ -1.3
UBE4A-202ENST00000431736 PBRM1Q86U86 1689 aa6.92□□□□□ -1.3
UBE4A-202ENST00000431736 GGT6Q6P531 493 aa6.92□□□□□ -1.3
UBE4A-202ENST00000431736 SENP3Q9H4L4 574 aaPredicted RBP6.92□□□□□ -1.3
UBE4A-202ENST00000431736 IQGAP2Q13576 1575 aa6.92□□□□□ -1.3
UBE4A-202ENST00000431736 FMN1Q68DA7 1419 aa6.92□□□□□ -1.3
UBE4A-202ENST00000431736 EID1Q9Y6B2 187 aa6.91□□□□□ -1.3
UBE4A-202ENST00000431736 ABCC10Q5T3U5 1492 aa6.91□□□□□ -1.3
UBE4A-202ENST00000431736 CCNB3Q8WWL7 1395 aa6.9□□□□□ -1.3
UBE4A-202ENST00000431736 SPAG9O60271 1321 aaKnown RBP6.9□□□□□ -1.3
UBE4A-202ENST00000431736 ABCC2Q92887 1545 aa6.9□□□□□ -1.3
UBE4A-202ENST00000431736 FAM50AQ14320 339 aaKnown RBP6.89□□□□□ -1.31
UBE4A-202ENST00000431736 KANK1Q14678 1352 aa6.89□□□□□ -1.31
UBE4A-202ENST00000431736 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.88□□□□□ -1.314e-7■■■□□ 17.9
UBE4A-202ENST00000431736 RAPGEF3O95398 923 aa6.88□□□□□ -1.31
UBE4A-202ENST00000431736 MEX3CQ5U5Q3 659 aaKnown RBP6.88□□□□□ -1.31
UBE4A-202ENST00000431736 WDR7Q9Y4E6 1490 aa6.88□□□□□ -1.31
UBE4A-202ENST00000431736 DENND4BO75064 1496 aaPredicted RBP6.87□□□□□ -1.31
UBE4A-202ENST00000431736 CLASP1Q7Z460 1538 aa6.87□□□□□ -1.31
UBE4A-202ENST00000431736 FANCAO15360 1455 aa6.87□□□□□ -1.31
UBE4A-202ENST00000431736 HAP1P54257 671 aaPredicted RBP6.87□□□□□ -1.31
UBE4A-202ENST00000431736 UBAP1LF5GYI3 381 aa6.85□□□□□ -1.31
UBE4A-202ENST00000431736 TOM1O60784 492 aa6.85□□□□□ -1.31
UBE4A-202ENST00000431736 RSPH4AQ5TD94 716 aa6.85□□□□□ -1.31
UBE4A-202ENST00000431736 FBXO41Q8TF61 875 aa6.85□□□□□ -1.31
UBE4A-202ENST00000431736 ITGAEP38570 1179 aa6.85□□□□□ -1.31
UBE4A-202ENST00000431736 ABCA5Q8WWZ7 1642 aa6.84□□□□□ -1.31
UBE4A-202ENST00000431736 WASHC2CQ9Y4E1 1318 aa6.84□□□□□ -1.31
UBE4A-202ENST00000431736 PIP4K2BP78356 416 aa6.84□□□□□ -1.31
UBE4A-202ENST00000431736 BIVM-ERCC5R4GMW8 1640 aa6.84□□□□□ -1.32
UBE4A-202ENST00000431736 CCDC18Q5T9S5 1454 aa6.83□□□□□ -1.32
UBE4A-202ENST00000431736 DISP3Q9P2K9 1392 aa6.83□□□□□ -1.32
UBE4A-202ENST00000431736 FHOD3Q2V2M9 1422 aa6.83□□□□□ -1.32
UBE4A-202ENST00000431736 TSPOAP1O95153 1857 aa6.82□□□□□ -1.32
UBE4A-202ENST00000431736 THEMISQ8N1K5 641 aaPredicted RBP6.82□□□□□ -1.32
UBE4A-202ENST00000431736 TRIM52Q96A61 297 aa6.82□□□□□ -1.32
UBE4A-202ENST00000431736 KIF3BO15066 747 aa6.82□□□□□ -1.32
UBE4A-202ENST00000431736 SCAPERQ9BY12 1400 aa6.82□□□□□ -1.32
UBE4A-202ENST00000431736 DCAF8L1A6NGE4 600 aa6.81□□□□□ -1.32
UBE4A-202ENST00000431736 ZNF326Q5BKZ1 582 aaKnown RBP6.81□□□□□ -1.32
UBE4A-202ENST00000431736 ANKLE2Q86XL3 938 aa6.81□□□□□ -1.32
UBE4A-202ENST00000431736 UHRF1BP1Q6BDS2 1440 aa6.81□□□□□ -1.32
UBE4A-202ENST00000431736 ARHGAP5Q13017 1502 aa6.81□□□□□ -1.32
UBE4A-202ENST00000431736 HSPA2P54652 639 aa6.81□□□□□ -1.32
UBE4A-202ENST00000431736 PPP6R1Q9UPN7 881 aa6.8□□□□□ -1.32
UBE4A-202ENST00000431736 ILDR1Q86SU0 546 aaPredicted RBP6.8□□□□□ -1.32
UBE4A-202ENST00000431736 ADGRL1O94910 1474 aa6.8□□□□□ -1.32
UBE4A-202ENST00000431736 MAPKBP1O60336 1514 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms