RNA–Protein interactions for RNA: ENST00000430644.5

PCGF3-205, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 2,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-205ENST00000430644 WDR97A6NE52 1622 aa24.65■■□□□ 1.54
PCGF3-205ENST00000430644 TOP2BQ02880 1626 aa24.63■■□□□ 1.53
PCGF3-205ENST00000430644 SIN3AQ96ST3 1273 aa24.63■■□□□ 1.53
PCGF3-205ENST00000430644 HIRIP3Q9BW71 556 aaPredicted RBP24.6■■□□□ 1.53
PCGF3-205ENST00000430644 CCER2I3L3R5 266 aa24.58■■□□□ 1.53
PCGF3-205ENST00000430644 CFTRP13569 1480 aa24.54■■□□□ 1.52
PCGF3-205ENST00000430644 ANP32CO43423 234 aa24.54■■□□□ 1.52
PCGF3-205ENST00000430644 SETD5Q9C0A6 1442 aa24.52■■□□□ 1.52
PCGF3-205ENST00000430644 CADPSQ9ULU8 1353 aa24.52■■□□□ 1.52
PCGF3-205ENST00000430644 ARHGAP35Q9NRY4 1499 aa24.51■■□□□ 1.51
PCGF3-205ENST00000430644 NESP48681 1621 aa24.5■■□□□ 1.51
PCGF3-205ENST00000430644 FANCIQ9NVI1 1328 aa24.49■■□□□ 1.51
PCGF3-205ENST00000430644 BIVM-ERCC5R4GMW8 1640 aa24.48■■□□□ 1.51
PCGF3-205ENST00000430644 IRX6P78412 446 aaPredicted RBP24.4■■□□□ 1.5
PCGF3-205ENST00000430644 ERICH6Q7L0X2 663 aa24.4■■□□□ 1.5
PCGF3-205ENST00000430644 TIMELESSQ9UNS1 1208 aa24.4■■□□□ 1.5
PCGF3-205ENST00000430644 CDK11AQ9UQ88 783 aaPredicted RBP24.4■■□□□ 1.5
PCGF3-205ENST00000430644 FAM50AQ14320 339 aaKnown RBP24.36■■□□□ 1.49
PCGF3-205ENST00000430644 KIF27Q86VH2 1401 aa24.36■■□□□ 1.49
PCGF3-205ENST00000430644 PHLDB1Q86UU1 1377 aa24.35■■□□□ 1.49
PCGF3-205ENST00000430644 TIAM1Q13009 1591 aa24.34■■□□□ 1.49
PCGF3-205ENST00000430644 HNRNPUQ00839 825 aaKnown RBP eCLIP24.31■■□□□ 1.48
PCGF3-205ENST00000430644 LRRC9Q6ZRR7 1453 aa24.28■■□□□ 1.48
PCGF3-205ENST00000430644 CUX1P39880 1505 aa24.28■■□□□ 1.48
PCGF3-205ENST00000430644 MAP3K1Q13233 1512 aa24.27■■□□□ 1.48
PCGF3-205ENST00000430644 FANCD2Q9BXW9 1451 aa24.27■■□□□ 1.48
PCGF3-205ENST00000430644 PRDM2Q13029 1718 aa24.26■■□□□ 1.47
PCGF3-205ENST00000430644 LAMC3Q9Y6N6 1575 aa24.2■■□□□ 1.46
PCGF3-205ENST00000430644 DEKP35659 375 aaKnown RBP24.18■■□□□ 1.46
PCGF3-205ENST00000430644 TONSLQ96HA7 1378 aa24.18■■□□□ 1.46
PCGF3-205ENST00000430644 MYT1LQ9UL68 1186 aa24.16■■□□□ 1.46
PCGF3-205ENST00000430644 PPP4R2Q9NY27 417 aa24.15■■□□□ 1.46
PCGF3-205ENST00000430644 ERICH6BQ5W0A0 696 aa24.13■■□□□ 1.45
PCGF3-205ENST00000430644 PDS5BQ9NTI5 1447 aa24.09■■□□□ 1.45
PCGF3-205ENST00000430644 IGF1RP08069 1367 aa24.09■■□□□ 1.45
PCGF3-205ENST00000430644 ATP1B4Q9UN42 357 aaPredicted RBP24.08■■□□□ 1.45
PCGF3-205ENST00000430644 B4GALNT3Q6L9W6 998 aa24.07■■□□□ 1.44
PCGF3-205ENST00000430644 KIF21AQ7Z4S6 1674 aa24.07■■□□□ 1.44
PCGF3-205ENST00000430644 P3H3Q8IVL6 736 aa24.05■■□□□ 1.44
PCGF3-205ENST00000430644 CCDC184Q52MB2 194 aa24.03■■□□□ 1.44
PCGF3-205ENST00000430644 FHAD1B1AJZ9 1412 aa24.03■■□□□ 1.44
PCGF3-205ENST00000430644 CFAP43Q8NDM7 1665 aa24.02■■□□□ 1.44
PCGF3-205ENST00000430644 WASHC2AQ641Q2 1341 aa24.01■■□□□ 1.43
PCGF3-205ENST00000430644 PCF11O94913 1555 aaKnown RBP24.01■■□□□ 1.43
PCGF3-205ENST00000430644 FGD5Q6ZNL6 1462 aa24.01■■□□□ 1.43
PCGF3-205ENST00000430644 PRKCSHP14314 528 aaPredicted RBP23.99■■□□□ 1.43
PCGF3-205ENST00000430644 NOP58Q9Y2X3 529 aaKnown RBP23.99■■□□□ 1.43
PCGF3-205ENST00000430644 CARMIL1Q5VZK9 1371 aa23.99■■□□□ 1.43
PCGF3-205ENST00000430644 URB2Q14146 1524 aaKnown RBP23.99■■□□□ 1.43
PCGF3-205ENST00000430644 CCDC18Q5T9S5 1454 aa23.99■■□□□ 1.43
PCGF3-205ENST00000430644 NBR1Q14596 966 aa23.98■■□□□ 1.43
PCGF3-205ENST00000430644 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.98■■□□□ 1.436e-7■■■■■ 74.7
PCGF3-205ENST00000430644 TOPBP1Q92547 1522 aa23.98■■□□□ 1.43
PCGF3-205ENST00000430644 PAK3O75914 559 aaPredicted RBP23.97■■□□□ 1.43
PCGF3-205ENST00000430644 UACAQ9BZF9 1416 aa23.95■■□□□ 1.43
PCGF3-205ENST00000430644 KDM5BQ9UGL1 1544 aa23.95■■□□□ 1.42
PCGF3-205ENST00000430644 HSPA5P11021 654 aaKnown RBP23.95■■□□□ 1.42
PCGF3-205ENST00000430644 DNMBPQ6XZF7 1577 aa23.94■■□□□ 1.42
PCGF3-205ENST00000430644 RAD54L2Q9Y4B4 1467 aa23.94■■□□□ 1.42
PCGF3-205ENST00000430644 FAM9BQ8IZU0 186 aa23.92■■□□□ 1.42
PCGF3-205ENST00000430644 PTPRKQ15262 1439 aa23.91■■□□□ 1.42
PCGF3-205ENST00000430644 FGD6Q6ZV73 1430 aa23.89■■□□□ 1.42
PCGF3-205ENST00000430644 HFM1A2PYH4 1435 aa23.89■■□□□ 1.41
PCGF3-205ENST00000430644 POLA1P09884 1462 aaPredicted RBP23.89■■□□□ 1.41
PCGF3-205ENST00000430644 FHOD3Q2V2M9 1422 aa23.88■■□□□ 1.41
PCGF3-205ENST00000430644 AQRO60306 1485 aaKnown RBP eCLIP23.87■■□□□ 1.413e-10■■■■■ 32.7
PCGF3-205ENST00000430644 ERCC6Q03468 1493 aa23.87■■□□□ 1.41
PCGF3-205ENST00000430644 ZBED9Q6R2W3 1325 aa23.86■■□□□ 1.41
PCGF3-205ENST00000430644 CNTLNQ9NXG0 1405 aa23.85■■□□□ 1.41
PCGF3-205ENST00000430644 PTPN23Q9H3S7 1636 aa23.85■■□□□ 1.41
PCGF3-205ENST00000430644 PRKRIP1Q9H875 184 aaPredicted RBP23.84■■□□□ 1.41
PCGF3-205ENST00000430644 NCOA2Q15596 1464 aa23.84■■□□□ 1.41
PCGF3-205ENST00000430644 MRS2Q9HD23 443 aa23.83■■□□□ 1.41
PCGF3-205ENST00000430644 FYCO1Q9BQS8 1478 aa23.83■■□□□ 1.41
PCGF3-205ENST00000430644 NAIPQ13075 1403 aa23.82■■□□□ 1.4
PCGF3-205ENST00000430644 EIF4G2P78344 907 aaKnown RBP eCLIP23.81■■□□□ 1.43e-6■■■■■ 28.1
PCGF3-205ENST00000430644 C11orf95C9JLR9 678 aaPredicted RBP23.8■■□□□ 1.4
PCGF3-205ENST00000430644 CASKIN1Q8WXD9 1431 aa23.8■■□□□ 1.4
PCGF3-205ENST00000430644 MRC2Q9UBG0 1479 aa23.78■■□□□ 1.4
PCGF3-205ENST00000430644 ANO8Q9HCE9 1232 aaPredicted RBP23.77■■□□□ 1.4
PCGF3-205ENST00000430644 TDRD9Q8NDG6 1382 aaKnown RBP23.74■■□□□ 1.39
PCGF3-205ENST00000430644 IPO9Q96P70 1041 aaKnown RBP23.74■■□□□ 1.39
PCGF3-205ENST00000430644 CCDC7Q96M83 1385 aa23.72■■□□□ 1.39
PCGF3-205ENST00000430644 ANP32AP39687 249 aaKnown RBP23.72■■□□□ 1.39
PCGF3-205ENST00000430644 FMN1Q68DA7 1419 aa23.72■■□□□ 1.39
PCGF3-205ENST00000430644 AKNAQ7Z591 1439 aa23.71■■□□□ 1.39
PCGF3-205ENST00000430644 MTUS2Q5JR59 1369 aa23.71■■□□□ 1.39
PCGF3-205ENST00000430644 NCOA1Q15788 1441 aa23.7■■□□□ 1.38
PCGF3-205ENST00000430644 RTL5Q5HYW3 569 aaPredicted RBP23.68■■□□□ 1.38
PCGF3-205ENST00000430644 ABCA10Q8WWZ4 1543 aa23.68■■□□□ 1.38
PCGF3-205ENST00000430644 CCDC136Q96JN2 1154 aa23.67■■□□□ 1.38
PCGF3-205ENST00000430644 ZBTB47Q9UFB7 747 aaPredicted RBP23.67■■□□□ 1.38
PCGF3-205ENST00000430644 DENND4BO75064 1496 aaPredicted RBP23.67■■□□□ 1.38
PCGF3-205ENST00000430644 RRP7BPQ9NSQ0 103 aa23.66■■□□□ 1.38
PCGF3-205ENST00000430644 EFCAB5A4FU69 1503 aa23.65■■□□□ 1.38
PCGF3-205ENST00000430644 L3MBTL2Q969R5 705 aa23.65■■□□□ 1.38
PCGF3-205ENST00000430644 SMG6Q86US8 1419 aaKnown RBP23.64■■□□□ 1.38
PCGF3-205ENST00000430644 SALL2Q9Y467 1007 aaPredicted RBP23.63■■□□□ 1.37
PCGF3-205ENST00000430644 MYOM3Q5VTT5 1437 aa23.62■■□□□ 1.37
PCGF3-205ENST00000430644 SNAPC4Q5SXM2 1469 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms