RNA–Protein interactions for RNA: ENST00000428888.1

AC009495.1-201, humanhuman

TSL 5 BASIC

Gene AC009495.1, Length 372 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009495.1-201ENST00000428888 STAG3Q9UJ98 1225 aa15.55■□□□□ 0.08
AC009495.1-201ENST00000428888 CC2D2AQ9P2K1 1620 aa15.53■□□□□ 0.08
AC009495.1-201ENST00000428888 PRR29P0C7W0 189 aa15.52■□□□□ 0.08
AC009495.1-201ENST00000428888 PRKAR2AP13861 404 aaKnown RBP15.39■□□□□ 0.05
AC009495.1-201ENST00000428888 TRIM41Q8WV44 630 aa15.37■□□□□ 0.05
AC009495.1-201ENST00000428888 CHADLQ6NUI6 762 aa15.3■□□□□ 0.04
AC009495.1-201ENST00000428888 CFTRP13569 1480 aa15.25■□□□□ 0.03
AC009495.1-201ENST00000428888 CADPSQ9ULU8 1353 aa15.24■□□□□ 0.03
AC009495.1-201ENST00000428888 ABCC8Q09428 1581 aa15.23■□□□□ 0.03
AC009495.1-201ENST00000428888 CREBZFQ9NS37 354 aa15.22■□□□□ 0.03
AC009495.1-201ENST00000428888 WRNQ14191 1432 aaPredicted RBP eCLIP15.19■□□□□ 0.02
AC009495.1-201ENST00000428888 FBXO3Q9UK99 471 aa15.19■□□□□ 0.02
AC009495.1-201ENST00000428888 FARP1Q9Y4F1 1045 aaPredicted RBP15.17■□□□□ 0.02
AC009495.1-201ENST00000428888 HAX1O00165 279 aa15.15■□□□□ 0.02
AC009495.1-201ENST00000428888 PLEKHG5O94827 1062 aa15.09■□□□□ 0.01
AC009495.1-201ENST00000428888 MIER1Q8N108 512 aa15.09■□□□□ 0.01
AC009495.1-201ENST00000428888 FAM9AQ8IZU1 332 aaPredicted RBP15.08■□□□□ 0
AC009495.1-201ENST00000428888 PRDM2Q13029 1718 aa15.08■□□□□ 0
AC009495.1-201ENST00000428888 SYNJ1O43426 1573 aa15.07■□□□□ 0
AC009495.1-201ENST00000428888 LAMC3Q9Y6N6 1575 aa15.07■□□□□ 0
AC009495.1-201ENST00000428888 FANCD2Q9BXW9 1451 aa15.07■□□□□ 0
AC009495.1-201ENST00000428888 NESP48681 1621 aa15.06■□□□□ 0
AC009495.1-201ENST00000428888 PLCD3Q8N3E9 789 aa15.05■□□□□ -0
AC009495.1-201ENST00000428888 C19orf67A6NJJ6 358 aa15.04■□□□□ -0
AC009495.1-201ENST00000428888 MNX1P50219 401 aaPredicted RBP15.03■□□□□ -0
AC009495.1-201ENST00000428888 TOP2BQ02880 1626 aa15.03■□□□□ -0
AC009495.1-201ENST00000428888 PDS5BQ9NTI5 1447 aa15.02■□□□□ -0
AC009495.1-201ENST00000428888 NPM1P06748 294 aaKnown RBP eCLIP15.02■□□□□ -0
AC009495.1-201ENST00000428888 CUX1P39880 1505 aa15.01□□□□□ -0.01
AC009495.1-201ENST00000428888 EEA1Q15075 1411 aa14.99□□□□□ -0.01
AC009495.1-201ENST00000428888 CEP164Q9UPV0 1460 aa14.98□□□□□ -0.01
AC009495.1-201ENST00000428888 BIVM-ERCC5R4GMW8 1640 aa14.98□□□□□ -0.01
AC009495.1-201ENST00000428888 LOC105371045A0A1W2PR82 267 aa14.97□□□□□ -0.01
AC009495.1-201ENST00000428888 SOGA1O94964 1423 aa14.97□□□□□ -0.01
AC009495.1-201ENST00000428888 CD44P16070 742 aaKnown RBP14.94□□□□□ -0.02
AC009495.1-201ENST00000428888 VASPP50552 380 aaPredicted RBP14.94□□□□□ -0.02
AC009495.1-201ENST00000428888 EVX2Q03828 476 aa14.94□□□□□ -0.02
AC009495.1-201ENST00000428888 ZBTB47Q9UFB7 747 aaPredicted RBP14.94□□□□□ -0.02
AC009495.1-201ENST00000428888 SP7Q8TDD2 431 aaPredicted RBP14.93□□□□□ -0.02
AC009495.1-201ENST00000428888 DNMBPQ6XZF7 1577 aa14.9□□□□□ -0.02
AC009495.1-201ENST00000428888 RUSC2Q8N2Y8 1516 aa14.88□□□□□ -0.03
AC009495.1-201ENST00000428888 TOPBP1Q92547 1522 aa14.88□□□□□ -0.03
AC009495.1-201ENST00000428888 FGD5Q6ZNL6 1462 aa14.87□□□□□ -0.03
AC009495.1-201ENST00000428888 PAK3O75914 559 aaPredicted RBP14.85□□□□□ -0.03
AC009495.1-201ENST00000428888 KIF27Q86VH2 1401 aa14.84□□□□□ -0.03
AC009495.1-201ENST00000428888 URB2Q14146 1524 aaKnown RBP14.84□□□□□ -0.03
AC009495.1-201ENST00000428888 KIF21AQ7Z4S6 1674 aa14.83□□□□□ -0.04
AC009495.1-201ENST00000428888 ERCC6Q03468 1493 aa14.82□□□□□ -0.04
AC009495.1-201ENST00000428888 ZRANB1Q9UGI0 708 aa14.81□□□□□ -0.04
AC009495.1-201ENST00000428888 MRC2Q9UBG0 1479 aa14.81□□□□□ -0.04
AC009495.1-201ENST00000428888 CUX2O14529 1486 aa14.8□□□□□ -0.04
AC009495.1-201ENST00000428888 POLA1P09884 1462 aaPredicted RBP14.8□□□□□ -0.04
AC009495.1-201ENST00000428888 KLHL34Q8N239 644 aa14.77□□□□□ -0.05
AC009495.1-201ENST00000428888 GOLGA3Q08378 1498 aa14.76□□□□□ -0.05
AC009495.1-201ENST00000428888 RAD54L2Q9Y4B4 1467 aa14.76□□□□□ -0.05
AC009495.1-201ENST00000428888 UBTFP17480 764 aaKnown RBP14.74□□□□□ -0.05
AC009495.1-201ENST00000428888 ZNF579Q8NAF0 562 aaKnown RBP14.74□□□□□ -0.05
AC009495.1-201ENST00000428888 ABCA10Q8WWZ4 1543 aa14.74□□□□□ -0.05
AC009495.1-201ENST00000428888 KIF21BO75037 1637 aa14.73□□□□□ -0.05
AC009495.1-201ENST00000428888 CLCN6P51797 869 aa14.72□□□□□ -0.05
AC009495.1-201ENST00000428888 NUBP1P53384 320 aa14.72□□□□□ -0.05
AC009495.1-201ENST00000428888 RASEFQ8IZ41 740 aa14.72□□□□□ -0.05
AC009495.1-201ENST00000428888 TSPYL2Q9H2G4 693 aaPredicted RBP14.72□□□□□ -0.05
AC009495.1-201ENST00000428888 TNIKQ9UKE5 1360 aa14.71□□□□□ -0.06
AC009495.1-201ENST00000428888 IFNLR1Q8IU57 520 aaPredicted RBP14.7□□□□□ -0.06
AC009495.1-201ENST00000428888 WDR62O43379 1518 aa14.7□□□□□ -0.06
AC009495.1-201ENST00000428888 GABBR2O75899 941 aa14.68□□□□□ -0.06
AC009495.1-201ENST00000428888 IGF1RP08069 1367 aa14.68□□□□□ -0.06
AC009495.1-201ENST00000428888 PRXQ9BXM0 1461 aa14.68□□□□□ -0.06
AC009495.1-201ENST00000428888 RAPGEF2Q9Y4G8 1499 aa14.67□□□□□ -0.06
AC009495.1-201ENST00000428888 ERICH3Q5RHP9 1530 aa14.65□□□□□ -0.06
AC009495.1-201ENST00000428888 TDRD9Q8NDG6 1382 aaKnown RBP14.64□□□□□ -0.07
AC009495.1-201ENST00000428888 FAM212AQ96EL1 285 aa14.64□□□□□ -0.07
AC009495.1-201ENST00000428888 IFT140Q96RY7 1462 aa14.63□□□□□ -0.07
AC009495.1-201ENST00000428888 CARMIL1Q5VZK9 1371 aa14.63□□□□□ -0.07
AC009495.1-201ENST00000428888 PHF12Q96QT6 1004 aa14.63□□□□□ -0.07
AC009495.1-201ENST00000428888 CCDC61Q9Y6R9 512 aa14.63□□□□□ -0.07
AC009495.1-201ENST00000428888 THOC2Q8NI27 1593 aaKnown RBP14.63□□□□□ -0.07
AC009495.1-201ENST00000428888 CEP162Q5TB80 1403 aa14.62□□□□□ -0.07
AC009495.1-201ENST00000428888 SPOCK2Q92563 424 aa14.61□□□□□ -0.07
AC009495.1-201ENST00000428888 WDR97A6NE52 1622 aa14.61□□□□□ -0.07
AC009495.1-201ENST00000428888 GAPVD1Q14C86 1478 aa14.61□□□□□ -0.07
AC009495.1-201ENST00000428888 TARBP1Q13395 1621 aaKnown RBP14.6□□□□□ -0.07
AC009495.1-201ENST00000428888 ABCA5Q8WWZ7 1642 aa14.58□□□□□ -0.08
AC009495.1-201ENST00000428888 DCAF8Q5TAQ9 597 aa14.56□□□□□ -0.08
AC009495.1-201ENST00000428888 CLIP1P30622 1438 aa14.54□□□□□ -0.08
AC009495.1-201ENST00000428888 AQRO60306 1485 aaKnown RBP eCLIP14.54□□□□□ -0.08
AC009495.1-201ENST00000428888 CUL7Q14999 1698 aa14.54□□□□□ -0.08
AC009495.1-201ENST00000428888 GSE1Q14687 1217 aa14.52□□□□□ -0.09
AC009495.1-201ENST00000428888 GRIN2BQ13224 1484 aa14.51□□□□□ -0.09
AC009495.1-201ENST00000428888 RANGAP1P46060 587 aaPredicted RBP14.51□□□□□ -0.09
AC009495.1-201ENST00000428888 ZNF608Q9ULD9 1512 aaPredicted RBP14.51□□□□□ -0.09
AC009495.1-201ENST00000428888 KIF12Q96FN5 646 aa14.5□□□□□ -0.09
AC009495.1-201ENST00000428888 GALR2O43603 387 aaPredicted RBP14.49□□□□□ -0.09
AC009495.1-201ENST00000428888 FHAD1B1AJZ9 1412 aa14.47□□□□□ -0.09
AC009495.1-201ENST00000428888 MS4A3Q96HJ5 214 aa14.45□□□□□ -0.1
AC009495.1-201ENST00000428888 PBRM1Q86U86 1689 aa14.45□□□□□ -0.1
AC009495.1-201ENST00000428888 MAP3K13O43283 966 aa14.44□□□□□ -0.1
AC009495.1-201ENST00000428888 EIF4G3O43432 1585 aaKnown RBP14.43□□□□□ -0.1
AC009495.1-201ENST00000428888 DCBLD2Q96PD2 775 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms