RNA–Protein interactions for RNA: ENST00000428383.6

SNX31-202, Transcript of sorting nexin 31, humanhuman

TSL 1 (best) BASIC

Gene SNX31, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31-202ENST00000428383 RAPGEF2Q9Y4G8 1499 aa16.99■□□□□ 0.31
SNX31-202ENST00000428383 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
SNX31-202ENST00000428383 IFT140Q96RY7 1462 aa16.95■□□□□ 0.3
SNX31-202ENST00000428383 CARMIL1Q5VZK9 1371 aa16.95■□□□□ 0.3
SNX31-202ENST00000428383 ABCA5Q8WWZ7 1642 aa16.95■□□□□ 0.3
SNX31-202ENST00000428383 CLIP1P30622 1438 aa16.93■□□□□ 0.3
SNX31-202ENST00000428383 TARBP1Q13395 1621 aaKnown RBP16.92■□□□□ 0.3
SNX31-202ENST00000428383 GAPVD1Q14C86 1478 aa16.91■□□□□ 0.3
SNX31-202ENST00000428383 RAD54L2Q9Y4B4 1467 aa16.91■□□□□ 0.3
SNX31-202ENST00000428383 KCNA4P22459 653 aa16.9■□□□□ 0.3
SNX31-202ENST00000428383 TRIM26Q12899 539 aaPredicted RBP16.85■□□□□ 0.29
SNX31-202ENST00000428383 VPS8Q8N3P4 1428 aa16.83■□□□□ 0.28
SNX31-202ENST00000428383 GRIN2BQ13224 1484 aa16.81■□□□□ 0.28
SNX31-202ENST00000428383 C1QBPQ07021 282 aaKnown RBP16.81■□□□□ 0.28
SNX31-202ENST00000428383 EHMT2Q96KQ7 1210 aa16.81■□□□□ 0.28
SNX31-202ENST00000428383 EFCAB5A4FU69 1503 aa16.79■□□□□ 0.28
SNX31-202ENST00000428383 FHAD1B1AJZ9 1412 aa16.79■□□□□ 0.28
SNX31-202ENST00000428383 PBRM1Q86U86 1689 aa16.77■□□□□ 0.28
SNX31-202ENST00000428383 TDRD9Q8NDG6 1382 aaKnown RBP16.77■□□□□ 0.27
SNX31-202ENST00000428383 CTTNBP2Q8WZ74 1663 aa16.75■□□□□ 0.27
SNX31-202ENST00000428383 APLP2Q06481 763 aa16.73■□□□□ 0.27
SNX31-202ENST00000428383 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
SNX31-202ENST00000428383 ADAMTS12P58397 1594 aa16.71■□□□□ 0.27
SNX31-202ENST00000428383 ARHGAP35Q9NRY4 1499 aa16.67■□□□□ 0.26
SNX31-202ENST00000428383 MAP3K1Q13233 1512 aa16.67■□□□□ 0.26
SNX31-202ENST00000428383 EIF4G3O43432 1585 aaKnown RBP16.67■□□□□ 0.26
SNX31-202ENST00000428383 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.66■□□□□ 0.26
SNX31-202ENST00000428383 ARAP1Q96P48 1450 aa16.66■□□□□ 0.26
SNX31-202ENST00000428383 AQRO60306 1485 aaKnown RBP eCLIP16.64■□□□□ 0.25
SNX31-202ENST00000428383 PCGF6Q9BYE7 350 aa16.63■□□□□ 0.25
SNX31-202ENST00000428383 RIMBP3CA6NJZ7 1639 aa16.63■□□□□ 0.25
SNX31-202ENST00000428383 RIMBP3BA6NNM3 1639 aa16.63■□□□□ 0.25
SNX31-202ENST00000428383 RIMBP3Q9UFD9 1639 aa16.63■□□□□ 0.25
SNX31-202ENST00000428383 FMN1Q68DA7 1419 aa16.62■□□□□ 0.25
SNX31-202ENST00000428383 ZNF608Q9ULD9 1512 aaPredicted RBP16.62■□□□□ 0.25
SNX31-202ENST00000428383 CYB5RLQ6IPT4 315 aa16.62■□□□□ 0.25
SNX31-202ENST00000428383 SYNJ2O15056 1496 aa16.6■□□□□ 0.25
SNX31-202ENST00000428383 SAMD9Q5K651 1589 aa16.59■□□□□ 0.25
SNX31-202ENST00000428383 IQGAP2Q13576 1575 aa16.58■□□□□ 0.24
SNX31-202ENST00000428383 KIAA0586Q9BVV6 1533 aa16.57■□□□□ 0.24
SNX31-202ENST00000428383 SNAPC4Q5SXM2 1469 aa16.57■□□□□ 0.24
SNX31-202ENST00000428383 GRIN2AQ12879 1464 aa16.56■□□□□ 0.24
SNX31-202ENST00000428383 FYCO1Q9BQS8 1478 aa16.56■□□□□ 0.24
SNX31-202ENST00000428383 ARHGEF11O15085 1522 aa16.54■□□□□ 0.24
SNX31-202ENST00000428383 UGGT2Q9NYU1 1516 aa16.53■□□□□ 0.24
SNX31-202ENST00000428383 CASKIN1Q8WXD9 1431 aa16.52■□□□□ 0.23
SNX31-202ENST00000428383 TRHP20396 242 aaPredicted RBP16.49■□□□□ 0.23
SNX31-202ENST00000428383 CHMP7Q8WUX9 453 aaPredicted RBP16.48■□□□□ 0.23
SNX31-202ENST00000428383 TIAM1Q13009 1591 aa16.47■□□□□ 0.23
SNX31-202ENST00000428383 NUP160Q12769 1436 aa16.46■□□□□ 0.23
SNX31-202ENST00000428383 RANGAP1P46060 587 aaPredicted RBP16.46■□□□□ 0.23
SNX31-202ENST00000428383 FBLN2P98095 1184 aa16.46■□□□□ 0.23
SNX31-202ENST00000428383 CFAP43Q8NDM7 1665 aa16.45■□□□□ 0.22
SNX31-202ENST00000428383 CCDC18Q5T9S5 1454 aa16.44■□□□□ 0.22
SNX31-202ENST00000428383 ZEB1P37275 1124 aaPredicted RBP16.42■□□□□ 0.22
SNX31-202ENST00000428383 FHOD3Q2V2M9 1422 aa16.42■□□□□ 0.22
SNX31-202ENST00000428383 CARMIL2Q6F5E8 1435 aa16.42■□□□□ 0.22
SNX31-202ENST00000428383 PCF11O94913 1555 aaKnown RBP16.42■□□□□ 0.22
SNX31-202ENST00000428383 U3KPZ7 1027 aaPredicted RBP16.4■□□□□ 0.22
SNX31-202ENST00000428383 HECW1Q76N89 1606 aa16.39■□□□□ 0.21
SNX31-202ENST00000428383 LRRC9Q6ZRR7 1453 aa16.38■□□□□ 0.21
SNX31-202ENST00000428383 KIAA0556O60303 1618 aa16.37■□□□□ 0.21
SNX31-202ENST00000428383 CEP170Q5SW79 1584 aa16.36■□□□□ 0.21
SNX31-202ENST00000428383 HRCP23327 699 aa16.35■□□□□ 0.21
SNX31-202ENST00000428383 CHD1O14646 1710 aa16.35■□□□□ 0.21
SNX31-202ENST00000428383 RRBP1Q9P2E9 1410 aaKnown RBP16.35■□□□□ 0.21
SNX31-202ENST00000428383 DISP1Q96F81 1524 aa16.32■□□□□ 0.2
SNX31-202ENST00000428383 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.31■□□□□ 0.2
SNX31-202ENST00000428383 EHBP1L1Q8N3D4 1523 aa16.3■□□□□ 0.2
SNX31-202ENST00000428383 SLC4A2P04920 1241 aa16.3■□□□□ 0.2
SNX31-202ENST00000428383 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
SNX31-202ENST00000428383 P3H3Q8IVL6 736 aa16.28■□□□□ 0.2
SNX31-202ENST00000428383 MTUS2Q5JR59 1369 aa16.27■□□□□ 0.2
SNX31-202ENST00000428383 JPH4Q96JJ6 628 aa16.27■□□□□ 0.2
SNX31-202ENST00000428383 CDK11AQ9UQ88 783 aaPredicted RBP16.27■□□□□ 0.2
SNX31-202ENST00000428383 CCNB3Q8WWL7 1395 aa16.26■□□□□ 0.19
SNX31-202ENST00000428383 KANK4Q5T7N3 995 aaPredicted RBP16.25■□□□□ 0.19
SNX31-202ENST00000428383 RAPGEF6Q8TEU7 1601 aa16.24■□□□□ 0.19
SNX31-202ENST00000428383 SUPT6HQ7KZ85 1726 aaKnown RBP16.24■□□□□ 0.19
SNX31-202ENST00000428383 EPRSP07814 1512 aaKnown RBP16.24■□□□□ 0.19
SNX31-202ENST00000428383 SHROOM2Q13796 1616 aa16.23■□□□□ 0.19
SNX31-202ENST00000428383 ATP1B4Q9UN42 357 aaPredicted RBP16.2■□□□□ 0.18
SNX31-202ENST00000428383 ACIN1Q9UKV3 1341 aaKnown RBP16.18■□□□□ 0.18
SNX31-202ENST00000428383 TTBK1Q5TCY1 1321 aaPredicted RBP16.17■□□□□ 0.18
SNX31-202ENST00000428383 CLSPNQ9HAW4 1339 aa16.17■□□□□ 0.18
SNX31-202ENST00000428383 CLASP1Q7Z460 1538 aa16.15■□□□□ 0.18
SNX31-202ENST00000428383 PRG4Q92954 1404 aaPredicted RBP16.15■□□□□ 0.18
SNX31-202ENST00000428383 MIA2Q96PC5 1412 aa16.15■□□□□ 0.18
SNX31-202ENST00000428383 NUP153P49790 1475 aaKnown RBP16.15■□□□□ 0.18
SNX31-202ENST00000428383 MYOM3Q5VTT5 1437 aa16.14■□□□□ 0.17
SNX31-202ENST00000428383 LRRIQ1Q96JM4 1722 aa16.14■□□□□ 0.17
SNX31-202ENST00000428383 ABCA8O94911 1581 aa16.13■□□□□ 0.17
SNX31-202ENST00000428383 FGD6Q6ZV73 1430 aa16.13■□□□□ 0.17
SNX31-202ENST00000428383 NCOA2Q15596 1464 aa16.13■□□□□ 0.17
SNX31-202ENST00000428383 PHLDB1Q86UU1 1377 aa16.13■□□□□ 0.17
SNX31-202ENST00000428383 PTPRGP23470 1445 aa16.12■□□□□ 0.17
SNX31-202ENST00000428383 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
SNX31-202ENST00000428383 SLC4A1APQ9BWU0 796 aaKnown RBP16.1■□□□□ 0.17
SNX31-202ENST00000428383 CCER1Q8TC90 406 aaPredicted RBP16.09■□□□□ 0.17
SNX31-202ENST00000428383 TROQ12816 1431 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms