RNA–Protein interactions for RNA: ENST00000427623.5

FREM1-205, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 5

Gene FREM1, Length 1,421 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-205ENST00000427623 PBRM1Q86U86 1689 aa13.26□□□□□ -0.29
FREM1-205ENST00000427623 UBTFP17480 764 aaKnown RBP13.26□□□□□ -0.29
FREM1-205ENST00000427623 ACIN1Q9UKV3 1341 aaKnown RBP13.26□□□□□ -0.29
FREM1-205ENST00000427623 EIF4G3O43432 1585 aaKnown RBP13.25□□□□□ -0.29
FREM1-205ENST00000427623 DIEXFQ68CQ4 756 aaKnown RBP13.24□□□□□ -0.29
FREM1-205ENST00000427623 RAD54L2Q9Y4B4 1467 aa13.24□□□□□ -0.29
FREM1-205ENST00000427623 KIF21BO75037 1637 aa13.23□□□□□ -0.29
FREM1-205ENST00000427623 ABCA5Q8WWZ7 1642 aa13.22□□□□□ -0.29
FREM1-205ENST00000427623 ABCA10Q8WWZ4 1543 aa13.21□□□□□ -0.29
FREM1-205ENST00000427623 ZNF608Q9ULD9 1512 aaPredicted RBP13.2□□□□□ -0.3
FREM1-205ENST00000427623 NCBP3Q53F19 620 aaKnown RBP13.19□□□□□ -0.3
FREM1-205ENST00000427623 DNAJC5Q9H3Z4 198 aa13.19□□□□□ -0.3
FREM1-205ENST00000427623 ZNF316A6NFI3 1004 aaPredicted RBP13.17□□□□□ -0.3
FREM1-205ENST00000427623 RNF216Q9NWF9 866 aaPredicted RBP13.16□□□□□ -0.3
FREM1-205ENST00000427623 RUSC2Q8N2Y8 1516 aa13.14□□□□□ -0.31
FREM1-205ENST00000427623 APLP2Q06481 763 aa13.13□□□□□ -0.31
FREM1-205ENST00000427623 CLIP1P30622 1438 aa13.13□□□□□ -0.31
FREM1-205ENST00000427623 VPS8Q8N3P4 1428 aa13.12□□□□□ -0.31
FREM1-205ENST00000427623 CHD1O14646 1710 aa13.12□□□□□ -0.31
FREM1-205ENST00000427623 AQRO60306 1485 aaKnown RBP eCLIP13.12□□□□□ -0.315e-8■■■□□ 17.4
FREM1-205ENST00000427623 GAPVD1Q14C86 1478 aa13.12□□□□□ -0.31
FREM1-205ENST00000427623 TDRD9Q8NDG6 1382 aaKnown RBP13.11□□□□□ -0.31
FREM1-205ENST00000427623 NEUROD1Q13562 356 aa13.09□□□□□ -0.31
FREM1-205ENST00000427623 GRIN2BQ13224 1484 aa13.09□□□□□ -0.31
FREM1-205ENST00000427623 ERICH3Q5RHP9 1530 aa13.08□□□□□ -0.31
FREM1-205ENST00000427623 CUL7Q14999 1698 aa13.08□□□□□ -0.32
FREM1-205ENST00000427623 KIF27Q86VH2 1401 aa13.07□□□□□ -0.32
FREM1-205ENST00000427623 MYT1Q01538 1121 aa13.07□□□□□ -0.32
FREM1-205ENST00000427623 CLSPNQ9HAW4 1339 aa13.07□□□□□ -0.32
FREM1-205ENST00000427623 ADAMTS12P58397 1594 aa13.07□□□□□ -0.32
FREM1-205ENST00000427623 SNAPC4Q5SXM2 1469 aa13.06□□□□□ -0.32
FREM1-205ENST00000427623 KCNA4P22459 653 aa13.05□□□□□ -0.32
FREM1-205ENST00000427623 TTBK1Q5TCY1 1321 aaPredicted RBP13.05□□□□□ -0.32
FREM1-205ENST00000427623 MAGI1Q96QZ7 1491 aaPredicted RBP13.05□□□□□ -0.32
FREM1-205ENST00000427623 POTEHQ6S545 545 aa13.03□□□□□ -0.32
FREM1-205ENST00000427623 NPM3O75607 178 aaKnown RBP13.02□□□□□ -0.33
FREM1-205ENST00000427623 GTF3C3Q9Y5Q9 886 aa13.02□□□□□ -0.33
FREM1-205ENST00000427623 SYNJ2O15056 1496 aa12.98□□□□□ -0.33
FREM1-205ENST00000427623 RAPGEF2Q9Y4G8 1499 aa12.98□□□□□ -0.33
FREM1-205ENST00000427623 HNRNPUL2Q1KMD3 747 aaKnown RBP12.96□□□□□ -0.33
FREM1-205ENST00000427623 FHAD1B1AJZ9 1412 aa12.96□□□□□ -0.33
FREM1-205ENST00000427623 CTTNBP2Q8WZ74 1663 aa12.95□□□□□ -0.34
FREM1-205ENST00000427623 IGF1RP08069 1367 aa12.93□□□□□ -0.34
FREM1-205ENST00000427623 GRIN2AQ12879 1464 aa12.93□□□□□ -0.34
FREM1-205ENST00000427623 PRXQ9BXM0 1461 aa12.93□□□□□ -0.34
FREM1-205ENST00000427623 CEP170Q5SW79 1584 aa12.9□□□□□ -0.34
FREM1-205ENST00000427623 FBLN2P98095 1184 aa12.89□□□□□ -0.35
FREM1-205ENST00000427623 CARMIL1Q5VZK9 1371 aa12.89□□□□□ -0.35
FREM1-205ENST00000427623 CHMP7Q8WUX9 453 aaPredicted RBP12.88□□□□□ -0.35
FREM1-205ENST00000427623 CLASP1Q7Z460 1538 aa12.87□□□□□ -0.35
FREM1-205ENST00000427623 MIER1Q8N108 512 aa12.86□□□□□ -0.35
FREM1-205ENST00000427623 RRBP1Q9P2E9 1410 aaKnown RBP12.85□□□□□ -0.35
FREM1-205ENST00000427623 ARAP1Q96P48 1450 aa12.85□□□□□ -0.35
FREM1-205ENST00000427623 NUP160Q12769 1436 aa12.84□□□□□ -0.35
FREM1-205ENST00000427623 DHX57Q6P158 1386 aaKnown RBP12.83□□□□□ -0.36
FREM1-205ENST00000427623 IQGAP2Q13576 1575 aa12.81□□□□□ -0.36
FREM1-205ENST00000427623 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
FREM1-205ENST00000427623 SHROOM2Q13796 1616 aa12.81□□□□□ -0.36
FREM1-205ENST00000427623 MAP3K1Q13233 1512 aa12.8□□□□□ -0.36
FREM1-205ENST00000427623 YTHDC1Q96MU7 727 aaKnown RBP12.79□□□□□ -0.36
FREM1-205ENST00000427623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.79□□□□□ -0.364e-10■■■■□ 23
FREM1-205ENST00000427623 KIAA0586Q9BVV6 1533 aa12.77□□□□□ -0.37
FREM1-205ENST00000427623 CCNB3Q8WWL7 1395 aa12.77□□□□□ -0.37
FREM1-205ENST00000427623 RANGAP1P46060 587 aaPredicted RBP12.75□□□□□ -0.37
FREM1-205ENST00000427623 RIMBP3CA6NJZ7 1639 aa12.74□□□□□ -0.37
FREM1-205ENST00000427623 RIMBP3BA6NNM3 1639 aa12.74□□□□□ -0.37
FREM1-205ENST00000427623 RIMBP3Q9UFD9 1639 aa12.74□□□□□ -0.37
FREM1-205ENST00000427623 ARHGAP35Q9NRY4 1499 aa12.72□□□□□ -0.37
FREM1-205ENST00000427623 KANK4Q5T7N3 995 aaPredicted RBP12.71□□□□□ -0.37
FREM1-205ENST00000427623 ARHGEF11O15085 1522 aa12.71□□□□□ -0.37
FREM1-205ENST00000427623 UGGT2Q9NYU1 1516 aa12.7□□□□□ -0.38
FREM1-205ENST00000427623 KIAA0556O60303 1618 aa12.69□□□□□ -0.38
FREM1-205ENST00000427623 ERCC6L2Q5T890 1561 aa12.69□□□□□ -0.38
FREM1-205ENST00000427623 TIMELESSQ9UNS1 1208 aa12.69□□□□□ -0.38
FREM1-205ENST00000427623 SAMD9Q5K651 1589 aa12.68□□□□□ -0.38
FREM1-205ENST00000427623 TIAM1Q13009 1591 aa12.66□□□□□ -0.38
FREM1-205ENST00000427623 PRG4Q92954 1404 aaPredicted RBP12.66□□□□□ -0.38
FREM1-205ENST00000427623 JPH4Q96JJ6 628 aa12.64□□□□□ -0.39
FREM1-205ENST00000427623 EFCAB5A4FU69 1503 aa12.64□□□□□ -0.39
FREM1-205ENST00000427623 DISP1Q96F81 1524 aa12.63□□□□□ -0.39
FREM1-205ENST00000427623 SETD5Q9C0A6 1442 aa12.63□□□□□ -0.39
FREM1-205ENST00000427623 CARMIL2Q6F5E8 1435 aa12.62□□□□□ -0.39
FREM1-205ENST00000427623 LRRC9Q6ZRR7 1453 aa12.61□□□□□ -0.39
FREM1-205ENST00000427623 RAB3GAP2Q9H2M9 1393 aa12.61□□□□□ -0.39
FREM1-205ENST00000427623 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.61□□□□□ -0.39
FREM1-205ENST00000427623 CFAP43Q8NDM7 1665 aa12.57□□□□□ -0.4
FREM1-205ENST00000427623 MAPKBP1O60336 1514 aa12.54□□□□□ -0.4
FREM1-205ENST00000427623 SUPT16HQ9Y5B9 1047 aaKnown RBP12.54□□□□□ -0.4
FREM1-205ENST00000427623 FYCO1Q9BQS8 1478 aa12.54□□□□□ -0.4
FREM1-205ENST00000427623 FHOD3Q2V2M9 1422 aa12.54□□□□□ -0.4
FREM1-205ENST00000427623 RAPGEF6Q8TEU7 1601 aa12.53□□□□□ -0.4
FREM1-205ENST00000427623 ADCY10Q96PN6 1610 aa12.53□□□□□ -0.4
FREM1-205ENST00000427623 ITGAEP38570 1179 aa12.53□□□□□ -0.4
FREM1-205ENST00000427623 PTPRGP23470 1445 aa12.51□□□□□ -0.41
FREM1-205ENST00000427623 CASKIN1Q8WXD9 1431 aa12.51□□□□□ -0.41
FREM1-205ENST00000427623 LRRIQ1Q96JM4 1722 aa12.51□□□□□ -0.41
FREM1-205ENST00000427623 ABCA8O94911 1581 aa12.51□□□□□ -0.41
FREM1-205ENST00000427623 DSG3P32926 999 aa12.51□□□□□ -0.41
FREM1-205ENST00000427623 P3H3Q8IVL6 736 aa12.51□□□□□ -0.41
FREM1-205ENST00000427623 PHLDB1Q86UU1 1377 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms