RNA–Protein interactions for RNA: ENST00000426820.6

HIPK1-208, Transcript of homeodomain interacting protein kinase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HIPK1, Length 4,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-208ENST00000426820 ARID4BQ4LE39 1312 aaPredicted RBP12.68□□□□□ -0.38
HIPK1-208ENST00000426820 MAGI1Q96QZ7 1491 aaPredicted RBP12.67□□□□□ -0.38
HIPK1-208ENST00000426820 RAPGEF2Q9Y4G8 1499 aa12.67□□□□□ -0.38
HIPK1-208ENST00000426820 SYNJ2O15056 1496 aa12.67□□□□□ -0.38
HIPK1-208ENST00000426820 PPARGC1BQ86YN6 1023 aaKnown RBP12.65□□□□□ -0.38
HIPK1-208ENST00000426820 PRG4Q92954 1404 aaPredicted RBP12.65□□□□□ -0.38
HIPK1-208ENST00000426820 ITGAEP38570 1179 aa12.65□□□□□ -0.38
HIPK1-208ENST00000426820 ABCA10Q8WWZ4 1543 aa12.64□□□□□ -0.39
HIPK1-208ENST00000426820 SYNJ1O43426 1573 aa12.61□□□□□ -0.39
HIPK1-208ENST00000426820 THOC2Q8NI27 1593 aaKnown RBP12.6□□□□□ -0.39
HIPK1-208ENST00000426820 GOLGA3Q08378 1498 aa12.59□□□□□ -0.39
HIPK1-208ENST00000426820 TOP2BQ02880 1626 aa12.59□□□□□ -0.39
HIPK1-208ENST00000426820 FAM50AQ14320 339 aaKnown RBP12.59□□□□□ -0.39
HIPK1-208ENST00000426820 TNIKQ9UKE5 1360 aa12.56□□□□□ -0.4
HIPK1-208ENST00000426820 GRIN2AQ12879 1464 aa12.56□□□□□ -0.4
HIPK1-208ENST00000426820 MTUS2Q5JR59 1369 aa12.56□□□□□ -0.4
HIPK1-208ENST00000426820 CLIP1P30622 1438 aa12.53□□□□□ -0.4
HIPK1-208ENST00000426820 EIF4G3O43432 1585 aaKnown RBP12.53□□□□□ -0.4
HIPK1-208ENST00000426820 RUSC2Q8N2Y8 1516 aa12.52□□□□□ -0.4
HIPK1-208ENST00000426820 TSPY4P0CV99 314 aa12.51□□□□□ -0.41
HIPK1-208ENST00000426820 TSPY10P0CW01 314 aa12.51□□□□□ -0.41
HIPK1-208ENST00000426820 ERICH3Q5RHP9 1530 aa12.49□□□□□ -0.41
HIPK1-208ENST00000426820 KIAA0586Q9BVV6 1533 aa12.49□□□□□ -0.41
HIPK1-208ENST00000426820 MLECQ14165 292 aa12.49□□□□□ -0.41
HIPK1-208ENST00000426820 CFDP1Q9UEE9 299 aaPredicted RBP12.48□□□□□ -0.41
HIPK1-208ENST00000426820 EFCAB2Q5VUJ9 269 aa12.46□□□□□ -0.41
HIPK1-208ENST00000426820 FHOD3Q2V2M9 1422 aa12.44□□□□□ -0.42
HIPK1-208ENST00000426820 BCANQ96GW7 911 aa12.43□□□□□ -0.42
HIPK1-208ENST00000426820 FMN1Q68DA7 1419 aa12.43□□□□□ -0.42
HIPK1-208ENST00000426820 PRDM2Q13029 1718 aa12.43□□□□□ -0.42
HIPK1-208ENST00000426820 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
HIPK1-208ENST00000426820 TRIM52Q96A61 297 aa12.39□□□□□ -0.43
HIPK1-208ENST00000426820 UACAQ9BZF9 1416 aa12.38□□□□□ -0.43
HIPK1-208ENST00000426820 BIVM-ERCC5R4GMW8 1640 aa12.38□□□□□ -0.43
HIPK1-208ENST00000426820 ARHGEF11O15085 1522 aa12.37□□□□□ -0.43
HIPK1-208ENST00000426820 CCNB3Q8WWL7 1395 aa12.37□□□□□ -0.43
HIPK1-208ENST00000426820 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.37□□□□□ -0.43
HIPK1-208ENST00000426820 TARBP1Q13395 1621 aaKnown RBP12.36□□□□□ -0.43
HIPK1-208ENST00000426820 CEP162Q5TB80 1403 aa12.35□□□□□ -0.43
HIPK1-208ENST00000426820 CUL7Q14999 1698 aa12.34□□□□□ -0.43
HIPK1-208ENST00000426820 CHIC2Q9UKJ5 165 aa12.34□□□□□ -0.43
HIPK1-208ENST00000426820 WDR97A6NE52 1622 aa12.34□□□□□ -0.43
HIPK1-208ENST00000426820 IQGAP2Q13576 1575 aa12.33□□□□□ -0.44
HIPK1-208ENST00000426820 NUP160Q12769 1436 aa12.32□□□□□ -0.44
HIPK1-208ENST00000426820 ADAMTS12P58397 1594 aa12.32□□□□□ -0.44
HIPK1-208ENST00000426820 CHGAP10645 457 aaKnown RBP12.31□□□□□ -0.44
HIPK1-208ENST00000426820 GGT6Q6P531 493 aa12.3□□□□□ -0.44
HIPK1-208ENST00000426820 PRXQ9BXM0 1461 aa12.29□□□□□ -0.44
HIPK1-208ENST00000426820 PLB1Q6P1J6 1458 aa12.26□□□□□ -0.45
HIPK1-208ENST00000426820 PBRM1Q86U86 1689 aa12.25□□□□□ -0.45
HIPK1-208ENST00000426820 SPAG9O60271 1321 aaKnown RBP12.25□□□□□ -0.45
HIPK1-208ENST00000426820 CHD1O14646 1710 aa12.25□□□□□ -0.45
HIPK1-208ENST00000426820 ABCA5Q8WWZ7 1642 aa12.25□□□□□ -0.45
HIPK1-208ENST00000426820 CD109Q6YHK3 1445 aa12.25□□□□□ -0.45
HIPK1-208ENST00000426820 HNRNPMP52272 730 aaKnown RBP eCLIP12.24□□□□□ -0.457e-13■■■■□ 23.4
HIPK1-208ENST00000426820 CEP170Q5SW79 1584 aa12.23□□□□□ -0.45
HIPK1-208ENST00000426820 RAPGEF3O95398 923 aa12.22□□□□□ -0.45
HIPK1-208ENST00000426820 CCDC18Q5T9S5 1454 aa12.22□□□□□ -0.45
HIPK1-208ENST00000426820 ASXL2Q76L83 1435 aa12.21□□□□□ -0.45
HIPK1-208ENST00000426820 PCGF6Q9BYE7 350 aa12.21□□□□□ -0.46
HIPK1-208ENST00000426820 ARAP1Q96P48 1450 aa12.2□□□□□ -0.46
HIPK1-208ENST00000426820 RSPH4AQ5TD94 716 aa12.18□□□□□ -0.46
HIPK1-208ENST00000426820 PPP1R15AO75807 674 aaPredicted RBP12.18□□□□□ -0.46
HIPK1-208ENST00000426820 RRP7BPQ9NSQ0 103 aa12.18□□□□□ -0.46
HIPK1-208ENST00000426820 KIF3BO15066 747 aa12.18□□□□□ -0.46
HIPK1-208ENST00000426820 AFAP1Q8N556 730 aa12.16□□□□□ -0.46
HIPK1-208ENST00000426820 RIMBP3CA6NJZ7 1639 aa12.15□□□□□ -0.46
HIPK1-208ENST00000426820 RIMBP3BA6NNM3 1639 aa12.15□□□□□ -0.46
HIPK1-208ENST00000426820 RIMBP3Q9UFD9 1639 aa12.15□□□□□ -0.46
HIPK1-208ENST00000426820 TEX14Q8IWB6 1497 aa12.15□□□□□ -0.46
HIPK1-208ENST00000426820 EFCAB5A4FU69 1503 aa12.13□□□□□ -0.47
HIPK1-208ENST00000426820 ABCC2Q92887 1545 aa12.13□□□□□ -0.47
HIPK1-208ENST00000426820 VPS8Q8N3P4 1428 aa12.13□□□□□ -0.47
HIPK1-208ENST00000426820 SENP3Q9H4L4 574 aaPredicted RBP12.13□□□□□ -0.47
HIPK1-208ENST00000426820 WASHC2CQ9Y4E1 1318 aa12.12□□□□□ -0.47
HIPK1-208ENST00000426820 KANK1Q14678 1352 aa12.12□□□□□ -0.47
HIPK1-208ENST00000426820 ZNF326Q5BKZ1 582 aaKnown RBP12.12□□□□□ -0.47
HIPK1-208ENST00000426820 C14orf37Q86TY3 774 aa12.11□□□□□ -0.47
HIPK1-208ENST00000426820 POGZQ7Z3K3 1410 aa12.11□□□□□ -0.47
HIPK1-208ENST00000426820 KIF21BO75037 1637 aa12.11□□□□□ -0.47
HIPK1-208ENST00000426820 KANK4Q5T7N3 995 aaPredicted RBP12.1□□□□□ -0.47
HIPK1-208ENST00000426820 SCAPERQ9BY12 1400 aa12.1□□□□□ -0.47
HIPK1-208ENST00000426820 SCAF1Q9H7N4 1312 aaKnown RBP12.09□□□□□ -0.47
HIPK1-208ENST00000426820 ARHGAP5Q13017 1502 aa12.09□□□□□ -0.47
HIPK1-208ENST00000426820 UGGT2Q9NYU1 1516 aa12.09□□□□□ -0.47
HIPK1-208ENST00000426820 ARHGAP35Q9NRY4 1499 aa12.08□□□□□ -0.47
HIPK1-208ENST00000426820 WDR7Q9Y4E6 1490 aa12.08□□□□□ -0.47
HIPK1-208ENST00000426820 CCER1Q8TC90 406 aaPredicted RBP12.08□□□□□ -0.48
HIPK1-208ENST00000426820 TROQ12816 1431 aaPredicted RBP12.07□□□□□ -0.48
HIPK1-208ENST00000426820 CASKIN1Q8WXD9 1431 aa12.07□□□□□ -0.48
HIPK1-208ENST00000426820 HDGFP51858 240 aaKnown RBP12.06□□□□□ -0.48
HIPK1-208ENST00000426820 ATP10BO94823 1461 aa12.04□□□□□ -0.48
HIPK1-208ENST00000426820 CLASP1Q7Z460 1538 aa12.04□□□□□ -0.48
HIPK1-208ENST00000426820 ERCC6L2Q5T890 1561 aa12.04□□□□□ -0.48
HIPK1-208ENST00000426820 KIAA0556O60303 1618 aa12.04□□□□□ -0.48
HIPK1-208ENST00000426820 DISP1Q96F81 1524 aa12.03□□□□□ -0.48
HIPK1-208ENST00000426820 SLC4A1APQ9BWU0 796 aaKnown RBP12.03□□□□□ -0.48
HIPK1-208ENST00000426820 PHLDB1Q86UU1 1377 aa12.03□□□□□ -0.48
HIPK1-208ENST00000426820 DENND4BO75064 1496 aaPredicted RBP12.03□□□□□ -0.48
HIPK1-208ENST00000426820 EPRSP07814 1512 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms