RNA–Protein interactions for RNA: ENST00000425297.2

SYN2-202, Transcript of synapsin II, humanhuman

TSL 5

Gene SYN2, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-202ENST00000425297 RIMBP3Q9UFD9 1639 aa10.16□□□□□ -0.78
SYN2-202ENST00000425297 C14orf37Q86TY3 774 aa10.15□□□□□ -0.79
SYN2-202ENST00000425297 EIF4G3O43432 1585 aaKnown RBP10.14□□□□□ -0.79
SYN2-202ENST00000425297 ARHGEF11O15085 1522 aa10.13□□□□□ -0.79
SYN2-202ENST00000425297 WDR97A6NE52 1622 aa10.12□□□□□ -0.79
SYN2-202ENST00000425297 TARBP1Q13395 1621 aaKnown RBP10.11□□□□□ -0.79
SYN2-202ENST00000425297 POLA1P09884 1462 aaPredicted RBP10.08□□□□□ -0.8
SYN2-202ENST00000425297 NPM2Q86SE8 214 aaKnown RBP10.07□□□□□ -0.8
SYN2-202ENST00000425297 AQRO60306 1485 aaKnown RBP eCLIP10.07□□□□□ -0.8
SYN2-202ENST00000425297 CHD1O14646 1710 aa10.05□□□□□ -0.8
SYN2-202ENST00000425297 SOGA1O94964 1423 aa10.04□□□□□ -0.8
SYN2-202ENST00000425297 ARAP1Q96P48 1450 aa10.02□□□□□ -0.8
SYN2-202ENST00000425297 MAGI1Q96QZ7 1491 aaPredicted RBP10.02□□□□□ -0.8
SYN2-202ENST00000425297 SUPT5HO00267 1087 aaKnown RBP10.01□□□□□ -0.81
SYN2-202ENST00000425297 MYT1Q01538 1121 aa10.01□□□□□ -0.81
SYN2-202ENST00000425297 RAD54L2Q9Y4B4 1467 aa10.01□□□□□ -0.81
SYN2-202ENST00000425297 CYB5RLQ6IPT4 315 aa10.01□□□□□ -0.81
SYN2-202ENST00000425297 FGD5Q6ZNL6 1462 aa10□□□□□ -0.81
SYN2-202ENST00000425297 SYNJ1O43426 1573 aa10□□□□□ -0.81
SYN2-202ENST00000425297 GRIN2BQ13224 1484 aa10□□□□□ -0.81
SYN2-202ENST00000425297 SNAPC4Q5SXM2 1469 aa10□□□□□ -0.81
SYN2-202ENST00000425297 CLASP1Q7Z460 1538 aa10□□□□□ -0.81
SYN2-202ENST00000425297 TDRD9Q8NDG6 1382 aaKnown RBP9.99□□□□□ -0.81
SYN2-202ENST00000425297 CUX1P39880 1505 aa9.97□□□□□ -0.81
SYN2-202ENST00000425297 SYNJ2O15056 1496 aa9.97□□□□□ -0.81
SYN2-202ENST00000425297 TRIM26Q12899 539 aaPredicted RBP9.97□□□□□ -0.81
SYN2-202ENST00000425297 CHMP7Q8WUX9 453 aaPredicted RBP9.96□□□□□ -0.81
SYN2-202ENST00000425297 PIAS4Q8N2W9 510 aaPredicted RBP9.94□□□□□ -0.82
SYN2-202ENST00000425297 TRHP20396 242 aaPredicted RBP9.94□□□□□ -0.82
SYN2-202ENST00000425297 ABCA10Q8WWZ4 1543 aa9.93□□□□□ -0.82
SYN2-202ENST00000425297 GAPVD1Q14C86 1478 aa9.93□□□□□ -0.82
SYN2-202ENST00000425297 PBRM1Q86U86 1689 aa9.91□□□□□ -0.82
SYN2-202ENST00000425297 ABCA5Q8WWZ7 1642 aa9.9□□□□□ -0.82
SYN2-202ENST00000425297 UBTFP17480 764 aaKnown RBP9.89□□□□□ -0.83
SYN2-202ENST00000425297 FBXO3Q9UK99 471 aa9.88□□□□□ -0.83
SYN2-202ENST00000425297 PAXIP1Q6ZW49 1069 aaPredicted RBP9.87□□□□□ -0.83
SYN2-202ENST00000425297 WRNQ14191 1432 aaPredicted RBP eCLIP9.87□□□□□ -0.83
SYN2-202ENST00000425297 HRCP23327 699 aa9.86□□□□□ -0.83
SYN2-202ENST00000425297 GRIN2AQ12879 1464 aa9.85□□□□□ -0.83
SYN2-202ENST00000425297 CFAP44Q96MT7 982 aa9.85□□□□□ -0.83
SYN2-202ENST00000425297 ADAMTS12P58397 1594 aa9.84□□□□□ -0.83
SYN2-202ENST00000425297 NUP160Q12769 1436 aa9.84□□□□□ -0.83
SYN2-202ENST00000425297 FHAD1B1AJZ9 1412 aa9.83□□□□□ -0.84
SYN2-202ENST00000425297 BIVM-ERCC5R4GMW8 1640 aa9.83□□□□□ -0.84
SYN2-202ENST00000425297 TOP2BQ02880 1626 aa9.82□□□□□ -0.84
SYN2-202ENST00000425297 TSHZ2Q9NRE2 1034 aa9.81□□□□□ -0.84
SYN2-202ENST00000425297 ERICH3Q5RHP9 1530 aa9.81□□□□□ -0.84
SYN2-202ENST00000425297 NBR1Q14596 966 aa9.8□□□□□ -0.84
SYN2-202ENST00000425297 SHROOM2Q13796 1616 aa9.79□□□□□ -0.84
SYN2-202ENST00000425297 EIF5BO60841 1220 aaKnown RBP9.79□□□□□ -0.84
SYN2-202ENST00000425297 CEP170Q5SW79 1584 aa9.79□□□□□ -0.84
SYN2-202ENST00000425297 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.77□□□□□ -0.85
SYN2-202ENST00000425297 NPM1P06748 294 aaKnown RBP eCLIP9.75□□□□□ -0.85
SYN2-202ENST00000425297 PKD2Q13563 968 aa9.75□□□□□ -0.85
SYN2-202ENST00000425297 ERCC6L2Q5T890 1561 aa9.75□□□□□ -0.85
SYN2-202ENST00000425297 BBXQ8WY36 941 aaPredicted RBP9.73□□□□□ -0.85
SYN2-202ENST00000425297 PRG4Q92954 1404 aaPredicted RBP9.72□□□□□ -0.85
SYN2-202ENST00000425297 LOC105371045A0A1W2PR82 267 aa9.7□□□□□ -0.86
SYN2-202ENST00000425297 RUSC2Q8N2Y8 1516 aa9.69□□□□□ -0.86
SYN2-202ENST00000425297 CNKSR2Q8WXI2 1034 aa9.69□□□□□ -0.86
SYN2-202ENST00000425297 JPH4Q96JJ6 628 aa9.69□□□□□ -0.86
SYN2-202ENST00000425297 MSH5O43196 834 aa9.68□□□□□ -0.86
SYN2-202ENST00000425297 MAPKBP1O60336 1514 aa9.67□□□□□ -0.86
SYN2-202ENST00000425297 CUL7Q14999 1698 aa9.66□□□□□ -0.86
SYN2-202ENST00000425297 KIAA0586Q9BVV6 1533 aa9.65□□□□□ -0.86
SYN2-202ENST00000425297 ABCC10Q5T3U5 1492 aa9.65□□□□□ -0.86
SYN2-202ENST00000425297 KIF27Q86VH2 1401 aa9.65□□□□□ -0.87
SYN2-202ENST00000425297 KIF13AQ9H1H9 1805 aa9.64□□□□□ -0.87
SYN2-202ENST00000425297 IGF1RP08069 1367 aa9.61□□□□□ -0.87
SYN2-202ENST00000425297 DIP2BQ9P265 1576 aa9.61□□□□□ -0.87
SYN2-202ENST00000425297 FAM69CQ0P6D2 419 aa9.6□□□□□ -0.87
SYN2-202ENST00000425297 ADCY10Q96PN6 1610 aa9.6□□□□□ -0.87
SYN2-202ENST00000425297 IFNLR1Q8IU57 520 aaPredicted RBP9.59□□□□□ -0.87
SYN2-202ENST00000425297 ATXN8OSP0DMR3 200 aa9.59□□□□□ -0.87
SYN2-202ENST00000425297 CARMIL2Q6F5E8 1435 aa9.59□□□□□ -0.87
SYN2-202ENST00000425297 SPRYD3Q8NCJ5 442 aa9.58□□□□□ -0.88
SYN2-202ENST00000425297 PTPRGP23470 1445 aa9.57□□□□□ -0.88
SYN2-202ENST00000425297 TNIKQ9UKE5 1360 aa9.56□□□□□ -0.88
SYN2-202ENST00000425297 CARMIL1Q5VZK9 1371 aa9.56□□□□□ -0.88
SYN2-202ENST00000425297 KDM6BO15054 1643 aa9.55□□□□□ -0.88
SYN2-202ENST00000425297 UHRF1BP1LA0JNW5 1464 aa9.55□□□□□ -0.88
SYN2-202ENST00000425297 PLB1Q6P1J6 1458 aa9.55□□□□□ -0.88
SYN2-202ENST00000425297 ABCC2Q92887 1545 aa9.54□□□□□ -0.88
SYN2-202ENST00000425297 GLI2P10070 1586 aa9.54□□□□□ -0.88
SYN2-202ENST00000425297 IQGAP2Q13576 1575 aa9.53□□□□□ -0.88
SYN2-202ENST00000425297 VASPP50552 380 aaPredicted RBP9.53□□□□□ -0.88
SYN2-202ENST00000425297 SLC4A2P04920 1241 aa9.51□□□□□ -0.89
SYN2-202ENST00000425297 UACAQ9BZF9 1416 aa9.5□□□□□ -0.89
SYN2-202ENST00000425297 UGGT2Q9NYU1 1516 aa9.49□□□□□ -0.89
SYN2-202ENST00000425297 ASXL2Q76L83 1435 aa9.49□□□□□ -0.89
SYN2-202ENST00000425297 PLEKHG5O94827 1062 aa9.49□□□□□ -0.89
SYN2-202ENST00000425297 RAPGEF2Q9Y4G8 1499 aa9.49□□□□□ -0.89
SYN2-202ENST00000425297 TEX14Q8IWB6 1497 aa9.48□□□□□ -0.89
SYN2-202ENST00000425297 DISP1Q96F81 1524 aa9.47□□□□□ -0.89
SYN2-202ENST00000425297 KDM5BQ9UGL1 1544 aa9.47□□□□□ -0.89
SYN2-202ENST00000425297 BRPF1P55201 1214 aaPredicted RBP9.45□□□□□ -0.9
SYN2-202ENST00000425297 EPRSP07814 1512 aaKnown RBP9.45□□□□□ -0.9
SYN2-202ENST00000425297 TSPOAP1O95153 1857 aa9.45□□□□□ -0.9
SYN2-202ENST00000425297 KIAA0556O60303 1618 aa9.44□□□□□ -0.9
SYN2-202ENST00000425297 KDM4FA0A1W2PPD8 638 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms