RNA–Protein interactions for RNA: ENST00000425297.2

SYN2-202, Transcript of synapsin II, humanhuman

TSL 5

Gene SYN2, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-202ENST00000425297 NISCHQ9Y2I1 1504 aa13.81□□□□□ -0.2
SYN2-202ENST00000425297 CHIC1Q5VXU3 224 aa13.52□□□□□ -0.25
SYN2-202ENST00000425297 AEBP2Q6ZN18 517 aaPredicted RBP13.46□□□□□ -0.25
SYN2-202ENST00000425297 SLC24A1O60721 1099 aa12.86□□□□□ -0.35
SYN2-202ENST00000425297 EHMT2Q96KQ7 1210 aa12.52□□□□□ -0.41
SYN2-202ENST00000425297 CCDC180Q9P1Z9 1646 aa12.48□□□□□ -0.41
SYN2-202ENST00000425297 ABCC9O60706 1549 aa12.46□□□□□ -0.42
SYN2-202ENST00000425297 PHF23Q9BUL5 403 aaPredicted RBP12.21□□□□□ -0.46
SYN2-202ENST00000425297 PLPPR3Q6T4P5 718 aa12.03□□□□□ -0.48
SYN2-202ENST00000425297 RB1CC1Q8TDY2 1594 aa11.91□□□□□ -0.5
SYN2-202ENST00000425297 RTN4Q9NQC3 1192 aaKnown RBP11.88□□□□□ -0.51
SYN2-202ENST00000425297 NACADO15069 1562 aa11.83□□□□□ -0.52
SYN2-202ENST00000425297 CSRNP3Q8WYN3 585 aa11.72□□□□□ -0.53
SYN2-202ENST00000425297 DNAJC5BQ9UF47 199 aa11.69□□□□□ -0.54
SYN2-202ENST00000425297 MYO15BQ96JP2 1530 aa11.68□□□□□ -0.54
SYN2-202ENST00000425297 KCNA4P22459 653 aa11.67□□□□□ -0.54
SYN2-202ENST00000425297 AMER1Q5JTC6 1135 aaPredicted RBP11.59□□□□□ -0.55
SYN2-202ENST00000425297 DCAF8L2P0C7V8 631 aa11.57□□□□□ -0.56
SYN2-202ENST00000425297 PABPN1Q86U42 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
SYN2-202ENST00000425297 UNC13AQ9UPW8 1703 aa11.52□□□□□ -0.56
SYN2-202ENST00000425297 SHROOM4Q9ULL8 1493 aa11.5□□□□□ -0.57
SYN2-202ENST00000425297 BICRAQ9NZM4 1560 aa11.49□□□□□ -0.57
SYN2-202ENST00000425297 NCBP3Q53F19 620 aaKnown RBP11.49□□□□□ -0.57
SYN2-202ENST00000425297 DCAF1Q9Y4B6 1507 aa11.48□□□□□ -0.57
SYN2-202ENST00000425297 ZCCHC6Q5VYS8 1495 aaKnown RBP11.44□□□□□ -0.58
SYN2-202ENST00000425297 DAXXQ9UER7 740 aaPredicted RBP11.36□□□□□ -0.59
SYN2-202ENST00000425297 SENP3Q9H4L4 574 aaPredicted RBP11.35□□□□□ -0.59
SYN2-202ENST00000425297 CECR2Q9BXF3 1484 aa11.27□□□□□ -0.61
SYN2-202ENST00000425297 SCRIBQ14160 1630 aa11.27□□□□□ -0.61
SYN2-202ENST00000425297 CC2D2AQ9P2K1 1620 aa11.27□□□□□ -0.61
SYN2-202ENST00000425297 PRKCSHP14314 528 aaPredicted RBP11.26□□□□□ -0.61
SYN2-202ENST00000425297 EIF4G1Q04637 1599 aaKnown RBP11.24□□□□□ -0.61
SYN2-202ENST00000425297 SLC4A1APQ9BWU0 796 aaKnown RBP11.21□□□□□ -0.62
SYN2-202ENST00000425297 ADRA2BP18089 450 aa10.99□□□□□ -0.65
SYN2-202ENST00000425297 TIMELESSQ9UNS1 1208 aa10.91□□□□□ -0.66
SYN2-202ENST00000425297 TAOK2Q9UL54 1235 aa10.9□□□□□ -0.66
SYN2-202ENST00000425297 NCAPD3P42695 1498 aa10.9□□□□□ -0.67
SYN2-202ENST00000425297 DNAJC5Q9H3Z4 198 aa10.89□□□□□ -0.67
SYN2-202ENST00000425297 CUX2O14529 1486 aa10.88□□□□□ -0.67
SYN2-202ENST00000425297 ARXQ96QS3 562 aa10.87□□□□□ -0.67
SYN2-202ENST00000425297 ZBTB22O15209 634 aa10.83□□□□□ -0.68
SYN2-202ENST00000425297 SMARCA2P51531 1590 aa10.83□□□□□ -0.68
SYN2-202ENST00000425297 HMGXB3Q12766 1538 aa10.83□□□□□ -0.68
SYN2-202ENST00000425297 ATAD2BQ9ULI0 1458 aa10.82□□□□□ -0.68
SYN2-202ENST00000425297 ERCC6Q03468 1493 aa10.81□□□□□ -0.68
SYN2-202ENST00000425297 SMARCA4P51532 1647 aa10.78□□□□□ -0.68
SYN2-202ENST00000425297 BCANQ96GW7 911 aa10.77□□□□□ -0.68
SYN2-202ENST00000425297 TULP1O00294 542 aaPredicted RBP10.77□□□□□ -0.69
SYN2-202ENST00000425297 BAZ1AQ9NRL2 1556 aaPredicted RBP10.76□□□□□ -0.69
SYN2-202ENST00000425297 TPRNQ4KMQ1 711 aa10.73□□□□□ -0.69
SYN2-202ENST00000425297 PEG3Q9GZU2 1588 aa10.72□□□□□ -0.69
SYN2-202ENST00000425297 BAZ1BQ9UIG0 1483 aaKnown RBP10.72□□□□□ -0.69
SYN2-202ENST00000425297 PLCB2Q00722 1185 aa10.7□□□□□ -0.7
SYN2-202ENST00000425297 LAMC3Q9Y6N6 1575 aa10.67□□□□□ -0.7
SYN2-202ENST00000425297 NESP48681 1621 aa10.65□□□□□ -0.7
SYN2-202ENST00000425297 THOC2Q8NI27 1593 aaKnown RBP10.63□□□□□ -0.71
SYN2-202ENST00000425297 PDS5BQ9NTI5 1447 aa10.62□□□□□ -0.71
SYN2-202ENST00000425297 HAP1P54257 671 aaPredicted RBP10.6□□□□□ -0.71
SYN2-202ENST00000425297 MROH2BQ7Z745 1585 aa10.6□□□□□ -0.71
SYN2-202ENST00000425297 FOXD1Q16676 465 aa10.57□□□□□ -0.72
SYN2-202ENST00000425297 HOMEZQ8IX15 550 aa10.55□□□□□ -0.72
SYN2-202ENST00000425297 CADPSQ9ULU8 1353 aa10.54□□□□□ -0.72
SYN2-202ENST00000425297 KIF21AQ7Z4S6 1674 aa10.53□□□□□ -0.72
SYN2-202ENST00000425297 MRC2Q9UBG0 1479 aa10.52□□□□□ -0.73
SYN2-202ENST00000425297 WDR62O43379 1518 aa10.49□□□□□ -0.73
SYN2-202ENST00000425297 FKBP8Q14318 412 aa10.48□□□□□ -0.73
SYN2-202ENST00000425297 NPM3O75607 178 aaKnown RBP10.47□□□□□ -0.73
SYN2-202ENST00000425297 GTF3C3Q9Y5Q9 886 aa10.47□□□□□ -0.73
SYN2-202ENST00000425297 CEP164Q9UPV0 1460 aa10.45□□□□□ -0.74
SYN2-202ENST00000425297 WIZO95785 1651 aa10.44□□□□□ -0.74
SYN2-202ENST00000425297 RANGAP1P46060 587 aaPredicted RBP10.43□□□□□ -0.74
SYN2-202ENST00000425297 PPP6R1Q9UPN7 881 aa10.43□□□□□ -0.74
SYN2-202ENST00000425297 FANCD2Q9BXW9 1451 aa10.41□□□□□ -0.74
SYN2-202ENST00000425297 CFTRP13569 1480 aa10.41□□□□□ -0.74
SYN2-202ENST00000425297 APLP2Q06481 763 aa10.4□□□□□ -0.74
SYN2-202ENST00000425297 TOP2AP11388 1531 aaKnown RBP10.39□□□□□ -0.75
SYN2-202ENST00000425297 RSF1Q96T23 1441 aaPredicted RBP10.36□□□□□ -0.75
SYN2-202ENST00000425297 PPP4R3CPQ6ZMV5 832 aa10.35□□□□□ -0.75
SYN2-202ENST00000425297 PODXL2Q9NZ53 605 aa10.34□□□□□ -0.75
SYN2-202ENST00000425297 VSIG10Q8N0Z9 540 aa10.33□□□□□ -0.76
SYN2-202ENST00000425297 TRIM41Q8WV44 630 aa10.32□□□□□ -0.76
SYN2-202ENST00000425297 URB2Q14146 1524 aaKnown RBP10.31□□□□□ -0.76
SYN2-202ENST00000425297 OSCARQ8IYS5 282 aa10.31□□□□□ -0.76
SYN2-202ENST00000425297 PRDM2Q13029 1718 aa10.29□□□□□ -0.76
SYN2-202ENST00000425297 KLHL34Q8N239 644 aa10.29□□□□□ -0.76
SYN2-202ENST00000425297 KDM2AQ9Y2K7 1162 aa10.29□□□□□ -0.76
SYN2-202ENST00000425297 IFT140Q96RY7 1462 aa10.27□□□□□ -0.77
SYN2-202ENST00000425297 ABCC8Q09428 1581 aa10.26□□□□□ -0.77
SYN2-202ENST00000425297 TMEM132AQ24JP5 1023 aa10.23□□□□□ -0.77
SYN2-202ENST00000425297 CCDC88BA6NC98 1476 aa10.23□□□□□ -0.77
SYN2-202ENST00000425297 PELP1Q8IZL8 1130 aaKnown RBP10.22□□□□□ -0.77
SYN2-202ENST00000425297 TOPBP1Q92547 1522 aa10.21□□□□□ -0.78
SYN2-202ENST00000425297 FBLN2P98095 1184 aa10.2□□□□□ -0.78
SYN2-202ENST00000425297 FOXD4L1Q9NU39 408 aa10.19□□□□□ -0.78
SYN2-202ENST00000425297 DNMBPQ6XZF7 1577 aa10.19□□□□□ -0.78
SYN2-202ENST00000425297 ERICH6Q7L0X2 663 aa10.18□□□□□ -0.78
SYN2-202ENST00000425297 TTBK1Q5TCY1 1321 aaPredicted RBP10.18□□□□□ -0.78
SYN2-202ENST00000425297 ZNF608Q9ULD9 1512 aaPredicted RBP10.17□□□□□ -0.78
SYN2-202ENST00000425297 RIMBP3CA6NJZ7 1639 aa10.16□□□□□ -0.78
SYN2-202ENST00000425297 RIMBP3BA6NNM3 1639 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms