RNA–Protein interactions for RNA: ENST00000425167.6

TRPV1-204, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPV1, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-204ENST00000425167 FANCD2Q9BXW9 1451 aa18.48■□□□□ 0.55
TRPV1-204ENST00000425167 PHLDB1Q86UU1 1377 aa18.46■□□□□ 0.55
TRPV1-204ENST00000425167 PCF11O94913 1555 aaKnown RBP18.45■□□□□ 0.54
TRPV1-204ENST00000425167 LAMC3Q9Y6N6 1575 aa18.45■□□□□ 0.54
TRPV1-204ENST00000425167 MAPKBP1O60336 1514 aa18.45■□□□□ 0.54
TRPV1-204ENST00000425167 P3H3Q8IVL6 736 aa18.44■□□□□ 0.54
TRPV1-204ENST00000425167 CFAP43Q8NDM7 1665 aa18.44■□□□□ 0.54
TRPV1-204ENST00000425167 SETD5Q9C0A6 1442 aa18.43■□□□□ 0.54
TRPV1-204ENST00000425167 NESP48681 1621 aa18.42■□□□□ 0.54
TRPV1-204ENST00000425167 FAM50AQ14320 339 aaKnown RBP18.41■□□□□ 0.54
TRPV1-204ENST00000425167 ATP1B4Q9UN42 357 aaPredicted RBP18.41■□□□□ 0.54
TRPV1-204ENST00000425167 DNMBPQ6XZF7 1577 aa18.41■□□□□ 0.54
TRPV1-204ENST00000425167 RAD54L2Q9Y4B4 1467 aa18.41■□□□□ 0.54
TRPV1-204ENST00000425167 FHOD3Q2V2M9 1422 aa18.39■□□□□ 0.53
TRPV1-204ENST00000425167 ABCA10Q8WWZ4 1543 aa18.38■□□□□ 0.53
TRPV1-204ENST00000425167 POLA1P09884 1462 aaPredicted RBP18.37■□□□□ 0.53
TRPV1-204ENST00000425167 TOPBP1Q92547 1522 aa18.36■□□□□ 0.53
TRPV1-204ENST00000425167 FYCO1Q9BQS8 1478 aa18.35■□□□□ 0.53
TRPV1-204ENST00000425167 EFCAB5A4FU69 1503 aa18.35■□□□□ 0.53
TRPV1-204ENST00000425167 CUL7Q14999 1698 aa18.33■□□□□ 0.52
TRPV1-204ENST00000425167 CASKIN1Q8WXD9 1431 aa18.31■□□□□ 0.52
TRPV1-204ENST00000425167 CTTNBP2Q8WZ74 1663 aa18.31■□□□□ 0.52
TRPV1-204ENST00000425167 SIN3AQ96ST3 1273 aa18.29■□□□□ 0.52
TRPV1-204ENST00000425167 AQRO60306 1485 aaKnown RBP eCLIP18.29■□□□□ 0.521e-6■■■□□ 17.3
TRPV1-204ENST00000425167 WDR97A6NE52 1622 aa18.28■□□□□ 0.52
TRPV1-204ENST00000425167 KIF21AQ7Z4S6 1674 aa18.26■□□□□ 0.51
TRPV1-204ENST00000425167 PDS5BQ9NTI5 1447 aa18.26■□□□□ 0.51
TRPV1-204ENST00000425167 FMN1Q68DA7 1419 aa18.24■□□□□ 0.51
TRPV1-204ENST00000425167 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.24■□□□□ 0.51
TRPV1-204ENST00000425167 SUPT16HQ9Y5B9 1047 aaKnown RBP18.22■□□□□ 0.51
TRPV1-204ENST00000425167 FGD6Q6ZV73 1430 aa18.21■□□□□ 0.51
TRPV1-204ENST00000425167 SNAPC4Q5SXM2 1469 aa18.21■□□□□ 0.51
TRPV1-204ENST00000425167 URB2Q14146 1524 aaKnown RBP18.2■□□□□ 0.5
TRPV1-204ENST00000425167 KCNH8Q96L42 1107 aa18.19■□□□□ 0.5
TRPV1-204ENST00000425167 TIMELESSQ9UNS1 1208 aa18.19■□□□□ 0.5
TRPV1-204ENST00000425167 MTUS2Q5JR59 1369 aa18.19■□□□□ 0.5
TRPV1-204ENST00000425167 DDX10Q13206 875 aaKnown RBP18.18■□□□□ 0.5
TRPV1-204ENST00000425167 TDRD9Q8NDG6 1382 aaKnown RBP18.16■□□□□ 0.5
TRPV1-204ENST00000425167 ABCA5Q8WWZ7 1642 aa18.16■□□□□ 0.5
TRPV1-204ENST00000425167 SAMD9Q5K651 1589 aa18.15■□□□□ 0.5
TRPV1-204ENST00000425167 CCDC18Q5T9S5 1454 aa18.14■□□□□ 0.49
TRPV1-204ENST00000425167 GAPVD1Q14C86 1478 aa18.13■□□□□ 0.49
TRPV1-204ENST00000425167 PPP1R15AO75807 674 aaPredicted RBP18.13■□□□□ 0.49
TRPV1-204ENST00000425167 LRRIQ1Q96JM4 1722 aa18.12■□□□□ 0.49
TRPV1-204ENST00000425167 HIRIP3Q9BW71 556 aaPredicted RBP18.11■□□□□ 0.49
TRPV1-204ENST00000425167 HFM1A2PYH4 1435 aa18.1■□□□□ 0.49
TRPV1-204ENST00000425167 PTPRKQ15262 1439 aa18.1■□□□□ 0.49
TRPV1-204ENST00000425167 NCOA2Q15596 1464 aa18.1■□□□□ 0.49
TRPV1-204ENST00000425167 TONSLQ96HA7 1378 aa18.09■□□□□ 0.49
TRPV1-204ENST00000425167 GRIN2BQ13224 1484 aa18.09■□□□□ 0.49
TRPV1-204ENST00000425167 PTPN23Q9H3S7 1636 aa18.09■□□□□ 0.49
TRPV1-204ENST00000425167 MYOM3Q5VTT5 1437 aa18.08■□□□□ 0.48
TRPV1-204ENST00000425167 UACAQ9BZF9 1416 aa18.08■□□□□ 0.48
TRPV1-204ENST00000425167 THOC2Q8NI27 1593 aaKnown RBP18.07■□□□□ 0.48
TRPV1-204ENST00000425167 SUPT6HQ7KZ85 1726 aaKnown RBP18.07■□□□□ 0.48
TRPV1-204ENST00000425167 MYT1Q01538 1121 aa18.06■□□□□ 0.48
TRPV1-204ENST00000425167 EHBP1L1Q8N3D4 1523 aa18.06■□□□□ 0.48
TRPV1-204ENST00000425167 MRC2Q9UBG0 1479 aa18.05■□□□□ 0.48
TRPV1-204ENST00000425167 NAIPQ13075 1403 aa18.04■□□□□ 0.48
TRPV1-204ENST00000425167 ERCC6Q03468 1493 aa18.01■□□□□ 0.47
TRPV1-204ENST00000425167 ANP32CO43423 234 aa18.01■□□□□ 0.47
TRPV1-204ENST00000425167 WDR62O43379 1518 aa18■□□□□ 0.47
TRPV1-204ENST00000425167 UGGT2Q9NYU1 1516 aa18■□□□□ 0.47
TRPV1-204ENST00000425167 MAGI3Q5TCQ9 1506 aa17.98■□□□□ 0.47
TRPV1-204ENST00000425167 CCER2I3L3R5 266 aa17.98■□□□□ 0.47
TRPV1-204ENST00000425167 TARBP1Q13395 1621 aaKnown RBP17.97■□□□□ 0.47
TRPV1-204ENST00000425167 ARHGEF11O15085 1522 aa17.97■□□□□ 0.47
TRPV1-204ENST00000425167 HECW1Q76N89 1606 aa17.95■□□□□ 0.46
TRPV1-204ENST00000425167 RRP7BPQ9NSQ0 103 aa17.93■□□□□ 0.46
TRPV1-204ENST00000425167 PBRM1Q86U86 1689 aa17.93■□□□□ 0.46
TRPV1-204ENST00000425167 CHIC2Q9UKJ5 165 aa17.93■□□□□ 0.46
TRPV1-204ENST00000425167 BCANQ96GW7 911 aa17.92■□□□□ 0.46
TRPV1-204ENST00000425167 TSHZ2Q9NRE2 1034 aa17.92■□□□□ 0.46
TRPV1-204ENST00000425167 TCOF1Q13428 1488 aaKnown RBP17.92■□□□□ 0.46
TRPV1-204ENST00000425167 IQGAP2Q13576 1575 aa17.91■□□□□ 0.46
TRPV1-204ENST00000425167 FKBP8Q14318 412 aa17.91■□□□□ 0.46
TRPV1-204ENST00000425167 TRIM52Q96A61 297 aa17.91■□□□□ 0.46
TRPV1-204ENST00000425167 KDM5BQ9UGL1 1544 aa17.9■□□□□ 0.46
TRPV1-204ENST00000425167 GCC2Q8IWJ2 1684 aa17.9■□□□□ 0.46
TRPV1-204ENST00000425167 EPRSP07814 1512 aaKnown RBP17.89■□□□□ 0.45
TRPV1-204ENST00000425167 CDK13Q14004 1512 aaKnown RBP17.87■□□□□ 0.45
TRPV1-204ENST00000425167 ADAMTS12P58397 1594 aa17.87■□□□□ 0.45
TRPV1-204ENST00000425167 NEFLP07196 543 aa17.85■□□□□ 0.45
TRPV1-204ENST00000425167 AKNAQ7Z591 1439 aa17.85■□□□□ 0.45
TRPV1-204ENST00000425167 ARID3CA6NKF2 412 aa17.85■□□□□ 0.45
TRPV1-204ENST00000425167 DENND4BO75064 1496 aaPredicted RBP17.84■□□□□ 0.45
TRPV1-204ENST00000425167 KDM6BO15054 1643 aa17.84■□□□□ 0.45
TRPV1-204ENST00000425167 MIA2Q96PC5 1412 aa17.83■□□□□ 0.45
TRPV1-204ENST00000425167 IFT140Q96RY7 1462 aa17.81■□□□□ 0.44
TRPV1-204ENST00000425167 HSPA5P11021 654 aaKnown RBP17.8■□□□□ 0.44
TRPV1-204ENST00000425167 MPHOSPH9Q99550 1183 aa17.79■□□□□ 0.44
TRPV1-204ENST00000425167 WASHC2AQ641Q2 1341 aa17.77■□□□□ 0.44
TRPV1-204ENST00000425167 EIF4G2P78344 907 aaKnown RBP eCLIP17.75■□□□□ 0.43
TRPV1-204ENST00000425167 FOXD1Q16676 465 aa17.75■□□□□ 0.43
TRPV1-204ENST00000425167 DAPK1P53355 1430 aa17.73■□□□□ 0.43
TRPV1-204ENST00000425167 L3MBTL2Q969R5 705 aa17.73■□□□□ 0.43
TRPV1-204ENST00000425167 HNRNPUQ00839 825 aaKnown RBP eCLIP17.72■□□□□ 0.43
TRPV1-204ENST00000425167 KIAA0556O60303 1618 aa17.72■□□□□ 0.43
TRPV1-204ENST00000425167 ZNF608Q9ULD9 1512 aaPredicted RBP17.71■□□□□ 0.43
TRPV1-204ENST00000425167 ROCK1Q13464 1354 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms