RNA–Protein interactions for RNA: ENST00000425141.5

SLC4A3-207, Transcript of solute carrier family 4 member 3, humanhuman

TSL 1 (best)

Gene SLC4A3, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A3-207ENST00000425141 SYNJ1O43426 1573 aa15.83■□□□□ 0.12
SLC4A3-207ENST00000425141 CC2D2AQ9P2K1 1620 aa15.82■□□□□ 0.12
SLC4A3-207ENST00000425141 CHMP7Q8WUX9 453 aaPredicted RBP15.82■□□□□ 0.12
SLC4A3-207ENST00000425141 ERCC6Q03468 1493 aa15.81■□□□□ 0.12
SLC4A3-207ENST00000425141 CFTRP13569 1480 aa15.8■□□□□ 0.12
SLC4A3-207ENST00000425141 HMGXB3Q12766 1538 aa15.79■□□□□ 0.12
SLC4A3-207ENST00000425141 HNRNPUQ00839 825 aaKnown RBP eCLIP15.79■□□□□ 0.12
SLC4A3-207ENST00000425141 FAM9BQ8IZU0 186 aa15.79■□□□□ 0.12
SLC4A3-207ENST00000425141 NESP48681 1621 aa15.78■□□□□ 0.12
SLC4A3-207ENST00000425141 PEG3Q9GZU2 1588 aa15.78■□□□□ 0.12
SLC4A3-207ENST00000425141 ZNF777Q9ULD5 760 aaPredicted RBP15.75■□□□□ 0.11
SLC4A3-207ENST00000425141 VPS8Q8N3P4 1428 aa15.75■□□□□ 0.11
SLC4A3-207ENST00000425141 KANK4Q5T7N3 995 aaPredicted RBP15.74■□□□□ 0.11
SLC4A3-207ENST00000425141 ANP32EQ9BTT0 268 aa15.74■□□□□ 0.11
SLC4A3-207ENST00000425141 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
SLC4A3-207ENST00000425141 NPM2Q86SE8 214 aaKnown RBP15.73■□□□□ 0.11
SLC4A3-207ENST00000425141 SIN3AQ96ST3 1273 aa15.72■□□□□ 0.11
SLC4A3-207ENST00000425141 RAD54L2Q9Y4B4 1467 aa15.71■□□□□ 0.11
SLC4A3-207ENST00000425141 MTUS2Q5JR59 1369 aa15.71■□□□□ 0.11
SLC4A3-207ENST00000425141 CDK11AQ9UQ88 783 aaPredicted RBP15.69■□□□□ 0.1
SLC4A3-207ENST00000425141 IGF1RP08069 1367 aa15.69■□□□□ 0.1
SLC4A3-207ENST00000425141 DAXXQ9UER7 740 aaPredicted RBP15.69■□□□□ 0.1
SLC4A3-207ENST00000425141 CUX1P39880 1505 aa15.67■□□□□ 0.1
SLC4A3-207ENST00000425141 CLSPNQ9HAW4 1339 aa15.66■□□□□ 0.1
SLC4A3-207ENST00000425141 NBR1Q14596 966 aa15.62■□□□□ 0.09
SLC4A3-207ENST00000425141 SENP3Q9H4L4 574 aaPredicted RBP15.62■□□□□ 0.09
SLC4A3-207ENST00000425141 RTL5Q5HYW3 569 aaPredicted RBP15.62■□□□□ 0.09
SLC4A3-207ENST00000425141 RRP7BPQ9NSQ0 103 aa15.61■□□□□ 0.09
SLC4A3-207ENST00000425141 TOP2BQ02880 1626 aa15.61■□□□□ 0.09
SLC4A3-207ENST00000425141 KCNH8Q96L42 1107 aa15.6■□□□□ 0.09
SLC4A3-207ENST00000425141 TONSLQ96HA7 1378 aa15.59■□□□□ 0.09
SLC4A3-207ENST00000425141 FHOD3Q2V2M9 1422 aa15.58■□□□□ 0.08
SLC4A3-207ENST00000425141 FHAD1B1AJZ9 1412 aa15.56■□□□□ 0.08
SLC4A3-207ENST00000425141 KDM2AQ9Y2K7 1162 aa15.54■□□□□ 0.08
SLC4A3-207ENST00000425141 SUPT16HQ9Y5B9 1047 aaKnown RBP15.54■□□□□ 0.08
SLC4A3-207ENST00000425141 CCNB3Q8WWL7 1395 aa15.53■□□□□ 0.08
SLC4A3-207ENST00000425141 PRXQ9BXM0 1461 aa15.52■□□□□ 0.07
SLC4A3-207ENST00000425141 TOPBP1Q92547 1522 aa15.51■□□□□ 0.07
SLC4A3-207ENST00000425141 POLA1P09884 1462 aaPredicted RBP15.51■□□□□ 0.07
SLC4A3-207ENST00000425141 GAPVD1Q14C86 1478 aa15.5■□□□□ 0.07
SLC4A3-207ENST00000425141 AQRO60306 1485 aaKnown RBP eCLIP15.5■□□□□ 0.07
SLC4A3-207ENST00000425141 MRS2Q9HD23 443 aa15.5■□□□□ 0.07
SLC4A3-207ENST00000425141 KIF21BO75037 1637 aa15.49■□□□□ 0.07
SLC4A3-207ENST00000425141 TSHZ2Q9NRE2 1034 aa15.48■□□□□ 0.07
SLC4A3-207ENST00000425141 ARAP1Q96P48 1450 aa15.45■□□□□ 0.06
SLC4A3-207ENST00000425141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.44■□□□□ 0.06
SLC4A3-207ENST00000425141 PLEKHD1A6NEE1 506 aa15.43■□□□□ 0.06
SLC4A3-207ENST00000425141 FMN1Q68DA7 1419 aa15.42■□□□□ 0.06
SLC4A3-207ENST00000425141 ARXQ96QS3 562 aa15.41■□□□□ 0.06
SLC4A3-207ENST00000425141 ERICH3Q5RHP9 1530 aa15.41■□□□□ 0.06
SLC4A3-207ENST00000425141 FOXD1Q16676 465 aa15.4■□□□□ 0.06
SLC4A3-207ENST00000425141 ARHGAP35Q9NRY4 1499 aa15.4■□□□□ 0.06
SLC4A3-207ENST00000425141 CFDP1Q9UEE9 299 aaPredicted RBP15.39■□□□□ 0.05
SLC4A3-207ENST00000425141 DNMBPQ6XZF7 1577 aa15.38■□□□□ 0.05
SLC4A3-207ENST00000425141 CCDC136Q96JN2 1154 aa15.38■□□□□ 0.05
SLC4A3-207ENST00000425141 B4GALNT3Q6L9W6 998 aa15.37■□□□□ 0.05
SLC4A3-207ENST00000425141 JPH4Q96JJ6 628 aa15.36■□□□□ 0.05
SLC4A3-207ENST00000425141 TMC1Q8TDI8 760 aa15.35■□□□□ 0.05
SLC4A3-207ENST00000425141 RGL3Q3MIN7 710 aa15.35■□□□□ 0.05
SLC4A3-207ENST00000425141 URB2Q14146 1524 aaKnown RBP15.34■□□□□ 0.05
SLC4A3-207ENST00000425141 LAMC3Q9Y6N6 1575 aa15.34■□□□□ 0.05
SLC4A3-207ENST00000425141 TSPY4P0CV99 314 aa15.34■□□□□ 0.05
SLC4A3-207ENST00000425141 TSPY10P0CW01 314 aa15.34■□□□□ 0.05
SLC4A3-207ENST00000425141 ANP32AP39687 249 aaKnown RBP15.33■□□□□ 0.05
SLC4A3-207ENST00000425141 BIVM-ERCC5R4GMW8 1640 aa15.33■□□□□ 0.04
SLC4A3-207ENST00000425141 MRC2Q9UBG0 1479 aa15.33■□□□□ 0.04
SLC4A3-207ENST00000425141 ABCA10Q8WWZ4 1543 aa15.31■□□□□ 0.04
SLC4A3-207ENST00000425141 CHGAP10645 457 aaKnown RBP15.3■□□□□ 0.04
SLC4A3-207ENST00000425141 RAB3GAP2Q9H2M9 1393 aa15.3■□□□□ 0.04
SLC4A3-207ENST00000425141 CANXP27824 592 aaKnown RBP15.29■□□□□ 0.04
SLC4A3-207ENST00000425141 NPM1P06748 294 aaKnown RBP eCLIP15.28■□□□□ 0.04
SLC4A3-207ENST00000425141 EIF5BO60841 1220 aaKnown RBP15.28■□□□□ 0.04
SLC4A3-207ENST00000425141 CARMIL2Q6F5E8 1435 aa15.27■□□□□ 0.04
SLC4A3-207ENST00000425141 EIF4G2P78344 907 aaKnown RBP eCLIP15.27■□□□□ 0.04
SLC4A3-207ENST00000425141 RTN4Q9NQC3 1192 aaKnown RBP15.27■□□□□ 0.04
SLC4A3-207ENST00000425141 GRIN2BQ13224 1484 aa15.27■□□□□ 0.03
SLC4A3-207ENST00000425141 SETD5Q9C0A6 1442 aa15.26■□□□□ 0.03
SLC4A3-207ENST00000425141 PHLDB1Q86UU1 1377 aa15.25■□□□□ 0.03
SLC4A3-207ENST00000425141 RBM19Q9Y4C8 960 aaKnown RBP15.24■□□□□ 0.03
SLC4A3-207ENST00000425141 SLC24A1O60721 1099 aa15.21■□□□□ 0.03
SLC4A3-207ENST00000425141 PLPPR3Q6T4P5 718 aa15.2■□□□□ 0.02
SLC4A3-207ENST00000425141 LRRC9Q6ZRR7 1453 aa15.2■□□□□ 0.02
SLC4A3-207ENST00000425141 IFT140Q96RY7 1462 aa15.2■□□□□ 0.02
SLC4A3-207ENST00000425141 ZNF608Q9ULD9 1512 aaPredicted RBP15.19■□□□□ 0.02
SLC4A3-207ENST00000425141 PRKCSHP14314 528 aaPredicted RBP15.19■□□□□ 0.02
SLC4A3-207ENST00000425141 ZBTB47Q9UFB7 747 aaPredicted RBP15.19■□□□□ 0.02
SLC4A3-207ENST00000425141 LAS1LQ9Y4W2 734 aaKnown RBP15.18■□□□□ 0.02
SLC4A3-207ENST00000425141 DHX57Q6P158 1386 aaKnown RBP15.18■□□□□ 0.02
SLC4A3-207ENST00000425141 SNAPC4Q5SXM2 1469 aa15.17■□□□□ 0.02
SLC4A3-207ENST00000425141 CASKIN1Q8WXD9 1431 aa15.17■□□□□ 0.02
SLC4A3-207ENST00000425141 ZNF644Q9H582 1327 aaPredicted RBP15.13■□□□□ 0.01
SLC4A3-207ENST00000425141 PTPRGP23470 1445 aa15.12■□□□□ 0.01
SLC4A3-207ENST00000425141 NEUROD2Q15784 382 aa15.11■□□□□ 0.01
SLC4A3-207ENST00000425141 HSPA5P11021 654 aaKnown RBP15.11■□□□□ 0.01
SLC4A3-207ENST00000425141 PRDM2Q13029 1718 aa15.1■□□□□ 0.01
SLC4A3-207ENST00000425141 CCDC18Q5T9S5 1454 aa15.1■□□□□ 0.01
SLC4A3-207ENST00000425141 FGD6Q6ZV73 1430 aa15.1■□□□□ 0.01
SLC4A3-207ENST00000425141 FYCO1Q9BQS8 1478 aa15.09■□□□□ 0.01
SLC4A3-207ENST00000425141 HNRNPMP52272 730 aaKnown RBP eCLIP15.09■□□□□ 0.01
SLC4A3-207ENST00000425141 CC2D1BQ5T0F9 858 aaKnown RBP15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms