RNA–Protein interactions for RNA: ENST00000424043.3

GAPDHP46-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 46, humanhuman

BASIC

Gene GAPDHP46, Length 994 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP46-201ENST00000424043 KIF21AQ7Z4S6 1674 aa14.55□□□□□ -0.08
GAPDHP46-201ENST00000424043 FKBP8Q14318 412 aa14.55□□□□□ -0.08
GAPDHP46-201ENST00000424043 PROM2Q8N271 834 aa14.51□□□□□ -0.09
GAPDHP46-201ENST00000424043 FXR2P51116 673 aaKnown RBP eCLIP14.5□□□□□ -0.09
GAPDHP46-201ENST00000424043 PIP4P2Q8N4L2 257 aa14.5□□□□□ -0.09
GAPDHP46-201ENST00000424043 MRC2Q9UBG0 1479 aa14.5□□□□□ -0.09
GAPDHP46-201ENST00000424043 WIZO95785 1651 aa14.49□□□□□ -0.09
GAPDHP46-201ENST00000424043 CEP164Q9UPV0 1460 aa14.44□□□□□ -0.1
GAPDHP46-201ENST00000424043 TRIM41Q8WV44 630 aa14.42□□□□□ -0.1
GAPDHP46-201ENST00000424043 WDR62O43379 1518 aa14.41□□□□□ -0.1
GAPDHP46-201ENST00000424043 PRR29P0C7W0 189 aa14.41□□□□□ -0.1
GAPDHP46-201ENST00000424043 FANCD2Q9BXW9 1451 aa14.4□□□□□ -0.1
GAPDHP46-201ENST00000424043 RSF1Q96T23 1441 aaPredicted RBP14.36□□□□□ -0.11
GAPDHP46-201ENST00000424043 STAG3Q9UJ98 1225 aa14.36□□□□□ -0.11
GAPDHP46-201ENST00000424043 CFTRP13569 1480 aa14.36□□□□□ -0.11
GAPDHP46-201ENST00000424043 TOP2AP11388 1531 aaKnown RBP14.34□□□□□ -0.11
GAPDHP46-201ENST00000424043 PRKAR2AP13861 404 aaKnown RBP14.33□□□□□ -0.12
GAPDHP46-201ENST00000424043 CHADLQ6NUI6 762 aa14.32□□□□□ -0.12
GAPDHP46-201ENST00000424043 URB2Q14146 1524 aaKnown RBP14.23□□□□□ -0.13
GAPDHP46-201ENST00000424043 CREBZFQ9NS37 354 aa14.22□□□□□ -0.13
GAPDHP46-201ENST00000424043 PRDM2Q13029 1718 aa14.18□□□□□ -0.14
GAPDHP46-201ENST00000424043 CCDC88BA6NC98 1476 aa14.18□□□□□ -0.14
GAPDHP46-201ENST00000424043 IFT140Q96RY7 1462 aa14.16□□□□□ -0.14
GAPDHP46-201ENST00000424043 ABCC8Q09428 1581 aa14.15□□□□□ -0.14
GAPDHP46-201ENST00000424043 FARP1Q9Y4F1 1045 aaPredicted RBP14.12□□□□□ -0.15
GAPDHP46-201ENST00000424043 HAX1O00165 279 aa14.09□□□□□ -0.15
GAPDHP46-201ENST00000424043 TOPBP1Q92547 1522 aa14.09□□□□□ -0.15
GAPDHP46-201ENST00000424043 ZNF608Q9ULD9 1512 aaPredicted RBP14.06□□□□□ -0.16
GAPDHP46-201ENST00000424043 MNX1P50219 401 aaPredicted RBP14.06□□□□□ -0.16
GAPDHP46-201ENST00000424043 EVX2Q03828 476 aa14.06□□□□□ -0.16
GAPDHP46-201ENST00000424043 MIER1Q8N108 512 aa14.04□□□□□ -0.16
GAPDHP46-201ENST00000424043 DNMBPQ6XZF7 1577 aa14.04□□□□□ -0.16
GAPDHP46-201ENST00000424043 FBXO3Q9UK99 471 aa14.03□□□□□ -0.16
GAPDHP46-201ENST00000424043 C19orf67A6NJJ6 358 aa14□□□□□ -0.17
GAPDHP46-201ENST00000424043 RIMBP3CA6NJZ7 1639 aa14□□□□□ -0.17
GAPDHP46-201ENST00000424043 RIMBP3BA6NNM3 1639 aa14□□□□□ -0.17
GAPDHP46-201ENST00000424043 RIMBP3Q9UFD9 1639 aa14□□□□□ -0.17
GAPDHP46-201ENST00000424043 EIF4G3O43432 1585 aaKnown RBP13.99□□□□□ -0.17
GAPDHP46-201ENST00000424043 ARHGEF11O15085 1522 aa13.97□□□□□ -0.17
GAPDHP46-201ENST00000424043 AQRO60306 1485 aaKnown RBP eCLIP13.97□□□□□ -0.17
GAPDHP46-201ENST00000424043 CYB5RLQ6IPT4 315 aa13.96□□□□□ -0.17
GAPDHP46-201ENST00000424043 PLCD3Q8N3E9 789 aa13.95□□□□□ -0.18
GAPDHP46-201ENST00000424043 POLA1P09884 1462 aaPredicted RBP13.93□□□□□ -0.18
GAPDHP46-201ENST00000424043 SOGA1O94964 1423 aa13.93□□□□□ -0.18
GAPDHP46-201ENST00000424043 TARBP1Q13395 1621 aaKnown RBP13.93□□□□□ -0.18
GAPDHP46-201ENST00000424043 VASPP50552 380 aaPredicted RBP13.9□□□□□ -0.18
GAPDHP46-201ENST00000424043 CHD1O14646 1710 aa13.9□□□□□ -0.18
GAPDHP46-201ENST00000424043 TDRD9Q8NDG6 1382 aaKnown RBP13.89□□□□□ -0.19
GAPDHP46-201ENST00000424043 CD44P16070 742 aaKnown RBP13.89□□□□□ -0.19
GAPDHP46-201ENST00000424043 CHMP7Q8WUX9 453 aaPredicted RBP13.89□□□□□ -0.19
GAPDHP46-201ENST00000424043 RAD54L2Q9Y4B4 1467 aa13.88□□□□□ -0.19
GAPDHP46-201ENST00000424043 PLEKHG5O94827 1062 aa13.88□□□□□ -0.19
GAPDHP46-201ENST00000424043 NPM1P06748 294 aaKnown RBP eCLIP13.88□□□□□ -0.19
GAPDHP46-201ENST00000424043 SP7Q8TDD2 431 aaPredicted RBP13.87□□□□□ -0.19
GAPDHP46-201ENST00000424043 WDR97A6NE52 1622 aa13.86□□□□□ -0.19
GAPDHP46-201ENST00000424043 FGD5Q6ZNL6 1462 aa13.85□□□□□ -0.19
GAPDHP46-201ENST00000424043 ARAP1Q96P48 1450 aa13.82□□□□□ -0.2
GAPDHP46-201ENST00000424043 GRIN2BQ13224 1484 aa13.81□□□□□ -0.2
GAPDHP46-201ENST00000424043 SNAPC4Q5SXM2 1469 aa13.81□□□□□ -0.2
GAPDHP46-201ENST00000424043 MAGI1Q96QZ7 1491 aaPredicted RBP13.81□□□□□ -0.2
GAPDHP46-201ENST00000424043 SYNJ1O43426 1573 aa13.8□□□□□ -0.2
GAPDHP46-201ENST00000424043 CUX1P39880 1505 aa13.79□□□□□ -0.2
GAPDHP46-201ENST00000424043 SUPT5HO00267 1087 aaKnown RBP13.78□□□□□ -0.2
GAPDHP46-201ENST00000424043 ZRANB1Q9UGI0 708 aa13.78□□□□□ -0.2
GAPDHP46-201ENST00000424043 SYNJ2O15056 1496 aa13.77□□□□□ -0.21
GAPDHP46-201ENST00000424043 IFNLR1Q8IU57 520 aaPredicted RBP13.76□□□□□ -0.21
GAPDHP46-201ENST00000424043 RASEFQ8IZ41 740 aa13.75□□□□□ -0.21
GAPDHP46-201ENST00000424043 ZBTB47Q9UFB7 747 aaPredicted RBP13.75□□□□□ -0.21
GAPDHP46-201ENST00000424043 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
GAPDHP46-201ENST00000424043 NUBP1P53384 320 aa13.74□□□□□ -0.21
GAPDHP46-201ENST00000424043 CLASP1Q7Z460 1538 aa13.73□□□□□ -0.21
GAPDHP46-201ENST00000424043 TSPYL2Q9H2G4 693 aaPredicted RBP13.72□□□□□ -0.21
GAPDHP46-201ENST00000424043 KLHL34Q8N239 644 aa13.71□□□□□ -0.21
GAPDHP46-201ENST00000424043 GABBR2O75899 941 aa13.69□□□□□ -0.22
GAPDHP46-201ENST00000424043 ZNF579Q8NAF0 562 aaKnown RBP13.69□□□□□ -0.22
GAPDHP46-201ENST00000424043 WRNQ14191 1432 aaPredicted RBP eCLIP13.69□□□□□ -0.22
GAPDHP46-201ENST00000424043 ABCA10Q8WWZ4 1543 aa13.69□□□□□ -0.22
GAPDHP46-201ENST00000424043 PBRM1Q86U86 1689 aa13.69□□□□□ -0.22
GAPDHP46-201ENST00000424043 PAK3O75914 559 aaPredicted RBP13.68□□□□□ -0.22
GAPDHP46-201ENST00000424043 PHF12Q96QT6 1004 aa13.66□□□□□ -0.22
GAPDHP46-201ENST00000424043 CCDC61Q9Y6R9 512 aa13.64□□□□□ -0.23
GAPDHP46-201ENST00000424043 ABCA5Q8WWZ7 1642 aa13.64□□□□□ -0.23
GAPDHP46-201ENST00000424043 GRIN2AQ12879 1464 aa13.61□□□□□ -0.23
GAPDHP46-201ENST00000424043 FHAD1B1AJZ9 1412 aa13.58□□□□□ -0.24
GAPDHP46-201ENST00000424043 TOP2BQ02880 1626 aa13.57□□□□□ -0.24
GAPDHP46-201ENST00000424043 SPOCK2Q92563 424 aa13.56□□□□□ -0.24
GAPDHP46-201ENST00000424043 ADAMTS12P58397 1594 aa13.55□□□□□ -0.24
GAPDHP46-201ENST00000424043 BIVM-ERCC5R4GMW8 1640 aa13.55□□□□□ -0.24
GAPDHP46-201ENST00000424043 GALR2O43603 387 aaPredicted RBP13.55□□□□□ -0.24
GAPDHP46-201ENST00000424043 DCAF8Q5TAQ9 597 aa13.55□□□□□ -0.24
GAPDHP46-201ENST00000424043 FAM212AQ96EL1 285 aa13.55□□□□□ -0.24
GAPDHP46-201ENST00000424043 NUP160Q12769 1436 aa13.54□□□□□ -0.24
GAPDHP46-201ENST00000424043 ERICH3Q5RHP9 1530 aa13.54□□□□□ -0.24
GAPDHP46-201ENST00000424043 CLCN6P51797 869 aa13.53□□□□□ -0.24
GAPDHP46-201ENST00000424043 KIF12Q96FN5 646 aa13.52□□□□□ -0.25
GAPDHP46-201ENST00000424043 CEP170Q5SW79 1584 aa13.51□□□□□ -0.25
GAPDHP46-201ENST00000424043 ERCC6L2Q5T890 1561 aa13.49□□□□□ -0.25
GAPDHP46-201ENST00000424043 MAP3K13O43283 966 aa13.48□□□□□ -0.25
GAPDHP46-201ENST00000424043 MS4A3Q96HJ5 214 aa13.48□□□□□ -0.25
GAPDHP46-201ENST00000424043 JPH4Q96JJ6 628 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms