RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 TOPBP1Q92547 1522 aa15.49■□□□□ 0.07
CLCN3P1-201ENST00000423965 CSRNP3Q8WYN3 585 aa15.46■□□□□ 0.07
CLCN3P1-201ENST00000423965 CLASP1Q7Z460 1538 aa15.44■□□□□ 0.06
CLCN3P1-201ENST00000423965 CHMP7Q8WUX9 453 aaPredicted RBP15.41■□□□□ 0.06
CLCN3P1-201ENST00000423965 TARBP1Q13395 1621 aaKnown RBP15.39■□□□□ 0.05
CLCN3P1-201ENST00000423965 GAPVD1Q14C86 1478 aa15.39■□□□□ 0.05
CLCN3P1-201ENST00000423965 PRDM2Q13029 1718 aa15.38■□□□□ 0.05
CLCN3P1-201ENST00000423965 SYNJ1O43426 1573 aa15.38■□□□□ 0.05
CLCN3P1-201ENST00000423965 KDM4FA0A1W2PPD8 638 aa15.38■□□□□ 0.05
CLCN3P1-201ENST00000423965 ZNF219Q9P2Y4 722 aaPredicted RBP15.38■□□□□ 0.05
CLCN3P1-201ENST00000423965 DNMBPQ6XZF7 1577 aa15.35■□□□□ 0.05
CLCN3P1-201ENST00000423965 TOP2AP11388 1531 aaKnown RBP15.32■□□□□ 0.04
CLCN3P1-201ENST00000423965 TDRD9Q8NDG6 1382 aaKnown RBP15.31■□□□□ 0.04
CLCN3P1-201ENST00000423965 SNAPC4Q5SXM2 1469 aa15.3■□□□□ 0.04
CLCN3P1-201ENST00000423965 POLA1P09884 1462 aaPredicted RBP15.28■□□□□ 0.04
CLCN3P1-201ENST00000423965 MAGI1Q96QZ7 1491 aaPredicted RBP15.28■□□□□ 0.04
CLCN3P1-201ENST00000423965 DSG3P32926 999 aa15.28■□□□□ 0.04
CLCN3P1-201ENST00000423965 ATF5Q9Y2D1 282 aaPredicted RBP15.28■□□□□ 0.04
CLCN3P1-201ENST00000423965 SOGA1O94964 1423 aa15.26■□□□□ 0.03
CLCN3P1-201ENST00000423965 ABCB7O75027 752 aa15.24■□□□□ 0.03
CLCN3P1-201ENST00000423965 ATXN8OSP0DMR3 200 aa15.24■□□□□ 0.03
CLCN3P1-201ENST00000423965 SYNJ2O15056 1496 aa15.24■□□□□ 0.03
CLCN3P1-201ENST00000423965 WDR97A6NE52 1622 aa15.24■□□□□ 0.03
CLCN3P1-201ENST00000423965 RAD54L2Q9Y4B4 1467 aa15.22■□□□□ 0.03
CLCN3P1-201ENST00000423965 CCDC88BA6NC98 1476 aa15.2■□□□□ 0.02
CLCN3P1-201ENST00000423965 GRIN2BQ13224 1484 aa15.2■□□□□ 0.02
CLCN3P1-201ENST00000423965 KIF13AQ9H1H9 1805 aa15.18■□□□□ 0.02
CLCN3P1-201ENST00000423965 FAM69CQ0P6D2 419 aa15.16■□□□□ 0.02
CLCN3P1-201ENST00000423965 FBXO41Q8TF61 875 aa15.13■□□□□ 0.01
CLCN3P1-201ENST00000423965 ABCC10Q5T3U5 1492 aa15.1■□□□□ 0.01
CLCN3P1-201ENST00000423965 POLA2Q14181 598 aa15.1■□□□□ 0.01
CLCN3P1-201ENST00000423965 ERCC6L2Q5T890 1561 aa15.1■□□□□ 0.01
CLCN3P1-201ENST00000423965 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
CLCN3P1-201ENST00000423965 FGD5Q6ZNL6 1462 aa15.05■□□□□ -0
CLCN3P1-201ENST00000423965 KDM6BO15054 1643 aa15.05■□□□□ -0
CLCN3P1-201ENST00000423965 CEP170Q5SW79 1584 aa15.03■□□□□ -0
CLCN3P1-201ENST00000423965 HECW2Q9P2P5 1572 aa15.01□□□□□ -0.01
CLCN3P1-201ENST00000423965 NUP160Q12769 1436 aa14.99□□□□□ -0.01
CLCN3P1-201ENST00000423965 MAPKBP1O60336 1514 aa14.97□□□□□ -0.01
CLCN3P1-201ENST00000423965 ADGRL1O94910 1474 aa14.97□□□□□ -0.01
CLCN3P1-201ENST00000423965 GRIN2AQ12879 1464 aa14.97□□□□□ -0.01
CLCN3P1-201ENST00000423965 DIP2BQ9P265 1576 aa14.95□□□□□ -0.02
CLCN3P1-201ENST00000423965 SHROOM2Q13796 1616 aa14.95□□□□□ -0.02
CLCN3P1-201ENST00000423965 PBRM1Q86U86 1689 aa14.94□□□□□ -0.02
CLCN3P1-201ENST00000423965 LMTK3Q96Q04 1460 aa14.92□□□□□ -0.02
CLCN3P1-201ENST00000423965 PRG4Q92954 1404 aaPredicted RBP14.91□□□□□ -0.02
CLCN3P1-201ENST00000423965 JPH4Q96JJ6 628 aa14.9□□□□□ -0.02
CLCN3P1-201ENST00000423965 CUX1P39880 1505 aa14.9□□□□□ -0.02
CLCN3P1-201ENST00000423965 SOCS7O14512 581 aa14.88□□□□□ -0.03
CLCN3P1-201ENST00000423965 ABCA10Q8WWZ4 1543 aa14.87□□□□□ -0.03
CLCN3P1-201ENST00000423965 ABCA5Q8WWZ7 1642 aa14.85□□□□□ -0.03
CLCN3P1-201ENST00000423965 TSPOAP1O95153 1857 aa14.85□□□□□ -0.03
CLCN3P1-201ENST00000423965 FHAD1B1AJZ9 1412 aa14.83□□□□□ -0.04
CLCN3P1-201ENST00000423965 ZBTB12Q9Y330 459 aaPredicted RBP14.82□□□□□ -0.04
CLCN3P1-201ENST00000423965 ADAMTS12P58397 1594 aa14.8□□□□□ -0.04
CLCN3P1-201ENST00000423965 ADCY10Q96PN6 1610 aa14.77□□□□□ -0.04
CLCN3P1-201ENST00000423965 ILDR2Q71H61 639 aa14.74□□□□□ -0.05
CLCN3P1-201ENST00000423965 COL17A1Q9UMD9 1497 aaPredicted RBP14.71□□□□□ -0.05
CLCN3P1-201ENST00000423965 TOP2BQ02880 1626 aa14.71□□□□□ -0.05
CLCN3P1-201ENST00000423965 GLI2P10070 1586 aa14.69□□□□□ -0.06
CLCN3P1-201ENST00000423965 WRNQ14191 1432 aaPredicted RBP eCLIP14.69□□□□□ -0.06
CLCN3P1-201ENST00000423965 DISP3Q9P2K9 1392 aa14.68□□□□□ -0.06
CLCN3P1-201ENST00000423965 ERICH3Q5RHP9 1530 aa14.67□□□□□ -0.06
CLCN3P1-201ENST00000423965 PLB1Q6P1J6 1458 aa14.67□□□□□ -0.06
CLCN3P1-201ENST00000423965 PPRC1Q5VV67 1664 aaKnown RBP14.66□□□□□ -0.06
CLCN3P1-201ENST00000423965 ASXL2Q76L83 1435 aa14.63□□□□□ -0.07
CLCN3P1-201ENST00000423965 TEX14Q8IWB6 1497 aa14.63□□□□□ -0.07
CLCN3P1-201ENST00000423965 PTPRGP23470 1445 aa14.6□□□□□ -0.07
CLCN3P1-201ENST00000423965 ABCC2Q92887 1545 aa14.6□□□□□ -0.07
CLCN3P1-201ENST00000423965 MKRN4PQ13434 485 aaPredicted RBP14.59□□□□□ -0.07
CLCN3P1-201ENST00000423965 RBM42Q9BTD8 480 aaKnown RBP14.59□□□□□ -0.07
CLCN3P1-201ENST00000423965 RUSC2Q8N2Y8 1516 aa14.59□□□□□ -0.07
CLCN3P1-201ENST00000423965 CERKQ8TCT0 537 aa14.56□□□□□ -0.08
CLCN3P1-201ENST00000423965 KIAA0586Q9BVV6 1533 aa14.56□□□□□ -0.08
CLCN3P1-201ENST00000423965 EPRSP07814 1512 aaKnown RBP14.53□□□□□ -0.08
CLCN3P1-201ENST00000423965 MAP3K4Q9Y6R4 1608 aa14.52□□□□□ -0.09
CLCN3P1-201ENST00000423965 UHRF1BP1LA0JNW5 1464 aa14.5□□□□□ -0.09
CLCN3P1-201ENST00000423965 PTPRMP28827 1452 aa14.5□□□□□ -0.09
CLCN3P1-201ENST00000423965 TNIKQ9UKE5 1360 aa14.49□□□□□ -0.09
CLCN3P1-201ENST00000423965 TTBK1Q5TCY1 1321 aaPredicted RBP14.46□□□□□ -0.09
CLCN3P1-201ENST00000423965 CARMIL2Q6F5E8 1435 aa14.46□□□□□ -0.09
CLCN3P1-201ENST00000423965 PCF11O94913 1555 aaKnown RBP14.46□□□□□ -0.09
CLCN3P1-201ENST00000423965 UACAQ9BZF9 1416 aa14.44□□□□□ -0.1
CLCN3P1-201ENST00000423965 KDM5BQ9UGL1 1544 aa14.42□□□□□ -0.1
CLCN3P1-201ENST00000423965 CUL7Q14999 1698 aa14.42□□□□□ -0.1
CLCN3P1-201ENST00000423965 BIVM-ERCC5R4GMW8 1640 aa14.41□□□□□ -0.1
CLCN3P1-201ENST00000423965 MAGI3Q5TCQ9 1506 aa14.41□□□□□ -0.1
CLCN3P1-201ENST00000423965 ADAMTSL3P82987 1691 aa14.39□□□□□ -0.11
CLCN3P1-201ENST00000423965 SPDYE2BA6NHP3 402 aa14.39□□□□□ -0.11
CLCN3P1-201ENST00000423965 SPDYE6P0CI01 402 aa14.39□□□□□ -0.11
CLCN3P1-201ENST00000423965 SPDYE2Q495Y8 402 aa14.39□□□□□ -0.11
CLCN3P1-201ENST00000423965 KIF21BO75037 1637 aa14.38□□□□□ -0.11
CLCN3P1-201ENST00000423965 CD109Q6YHK3 1445 aa14.38□□□□□ -0.11
CLCN3P1-201ENST00000423965 SPATA31D1Q6ZQQ2 1576 aa14.38□□□□□ -0.11
CLCN3P1-201ENST00000423965 HSPA2P54652 639 aa14.35□□□□□ -0.11
CLCN3P1-201ENST00000423965 AKT1S1Q96B36 256 aa14.35□□□□□ -0.11
CLCN3P1-201ENST00000423965 ZNF692Q9BU19 519 aaPredicted RBP14.35□□□□□ -0.11
CLCN3P1-201ENST00000423965 IGF1RP08069 1367 aa14.34□□□□□ -0.11
CLCN3P1-201ENST00000423965 WDR7Q9Y4E6 1490 aa14.33□□□□□ -0.12
CLCN3P1-201ENST00000423965 ARAP3Q8WWN8 1544 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms