RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 RAD54L2Q9Y4B4 1467 aa17.08■□□□□ 0.33
ERCC1-204ENST00000423698 KCNH8Q96L42 1107 aa17.07■□□□□ 0.32
ERCC1-204ENST00000423698 FGD5Q6ZNL6 1462 aa17.06■□□□□ 0.32
ERCC1-204ENST00000423698 FANCD2Q9BXW9 1451 aa17.05■□□□□ 0.32
ERCC1-204ENST00000423698 CCNB3Q8WWL7 1395 aa17.05■□□□□ 0.32
ERCC1-204ENST00000423698 ERICH3Q5RHP9 1530 aa17.02■□□□□ 0.32
ERCC1-204ENST00000423698 ANP32EQ9BTT0 268 aa17.01■□□□□ 0.31
ERCC1-204ENST00000423698 FHOD3Q2V2M9 1422 aa17■□□□□ 0.31
ERCC1-204ENST00000423698 BCANQ96GW7 911 aa16.99■□□□□ 0.31
ERCC1-204ENST00000423698 TDRD9Q8NDG6 1382 aaKnown RBP16.99■□□□□ 0.31
ERCC1-204ENST00000423698 RAB3GAP2Q9H2M9 1393 aa16.99■□□□□ 0.31
ERCC1-204ENST00000423698 SUPT16HQ9Y5B9 1047 aaKnown RBP16.98■□□□□ 0.31
ERCC1-204ENST00000423698 DDX10Q13206 875 aaKnown RBP16.97■□□□□ 0.31
ERCC1-204ENST00000423698 PRDM2Q13029 1718 aa16.97■□□□□ 0.31
ERCC1-204ENST00000423698 PHLDB1Q86UU1 1377 aa16.96■□□□□ 0.31
ERCC1-204ENST00000423698 TSHZ2Q9NRE2 1034 aa16.96■□□□□ 0.31
ERCC1-204ENST00000423698 CHIC2Q9UKJ5 165 aa16.93■□□□□ 0.3
ERCC1-204ENST00000423698 TOPBP1Q92547 1522 aa16.87■□□□□ 0.29
ERCC1-204ENST00000423698 POLA1P09884 1462 aaPredicted RBP16.87■□□□□ 0.29
ERCC1-204ENST00000423698 RRBP1Q9P2E9 1410 aaKnown RBP16.87■□□□□ 0.29
ERCC1-204ENST00000423698 CNGB1Q14028 1251 aaPredicted RBP16.86■□□□□ 0.29
ERCC1-204ENST00000423698 DNMBPQ6XZF7 1577 aa16.84■□□□□ 0.29
ERCC1-204ENST00000423698 RRP7BPQ9NSQ0 103 aa16.83■□□□□ 0.29
ERCC1-204ENST00000423698 LRRC9Q6ZRR7 1453 aa16.8■□□□□ 0.28
ERCC1-204ENST00000423698 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
ERCC1-204ENST00000423698 SETD5Q9C0A6 1442 aa16.79■□□□□ 0.28
ERCC1-204ENST00000423698 TRIM52Q96A61 297 aa16.79■□□□□ 0.28
ERCC1-204ENST00000423698 MTUS2Q5JR59 1369 aa16.78■□□□□ 0.28
ERCC1-204ENST00000423698 SLC24A1O60721 1099 aa16.78■□□□□ 0.28
ERCC1-204ENST00000423698 FOXD1Q16676 465 aa16.77■□□□□ 0.27
ERCC1-204ENST00000423698 TIAM1Q13009 1591 aa16.76■□□□□ 0.27
ERCC1-204ENST00000423698 PCF11O94913 1555 aaKnown RBP16.75■□□□□ 0.27
ERCC1-204ENST00000423698 ABCA10Q8WWZ4 1543 aa16.75■□□□□ 0.27
ERCC1-204ENST00000423698 PDS5BQ9NTI5 1447 aa16.75■□□□□ 0.27
ERCC1-204ENST00000423698 CLSPNQ9HAW4 1339 aa16.74■□□□□ 0.27
ERCC1-204ENST00000423698 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
ERCC1-204ENST00000423698 FBLN2P98095 1184 aa16.72■□□□□ 0.27
ERCC1-204ENST00000423698 AQRO60306 1485 aaKnown RBP eCLIP16.71■□□□□ 0.272e-7■■■■■ 39
ERCC1-204ENST00000423698 FHAD1B1AJZ9 1412 aa16.7■□□□□ 0.26
ERCC1-204ENST00000423698 MAPKBP1O60336 1514 aa16.7■□□□□ 0.26
ERCC1-204ENST00000423698 WDR97A6NE52 1622 aa16.7■□□□□ 0.26
ERCC1-204ENST00000423698 SENP3-EIF4A1A0A087X0R7 540 aa16.68■□□□□ 0.26
ERCC1-204ENST00000423698 KIF21AQ7Z4S6 1674 aa16.66■□□□□ 0.26
ERCC1-204ENST00000423698 GAPVD1Q14C86 1478 aa16.66■□□□□ 0.26
ERCC1-204ENST00000423698 TONSLQ96HA7 1378 aa16.64■□□□□ 0.25
ERCC1-204ENST00000423698 FKBP8Q14318 412 aa16.64■□□□□ 0.25
ERCC1-204ENST00000423698 PTPRKQ15262 1439 aa16.63■□□□□ 0.25
ERCC1-204ENST00000423698 PPP1R15AO75807 674 aaPredicted RBP16.62■□□□□ 0.25
ERCC1-204ENST00000423698 POLR3GLQ9BT43 218 aa16.62■□□□□ 0.25
ERCC1-204ENST00000423698 ZNF777Q9ULD5 760 aaPredicted RBP16.61■□□□□ 0.25
ERCC1-204ENST00000423698 IRX6P78412 446 aaPredicted RBP16.59■□□□□ 0.25
ERCC1-204ENST00000423698 CUL7Q14999 1698 aa16.59■□□□□ 0.25
ERCC1-204ENST00000423698 ZNF326Q5BKZ1 582 aaKnown RBP16.58■□□□□ 0.24
ERCC1-204ENST00000423698 ZNF644Q9H582 1327 aaPredicted RBP16.58■□□□□ 0.24
ERCC1-204ENST00000423698 FGD6Q6ZV73 1430 aa16.58■□□□□ 0.24
ERCC1-204ENST00000423698 RBM19Q9Y4C8 960 aaKnown RBP16.57■□□□□ 0.24
ERCC1-204ENST00000423698 ANP32CO43423 234 aa16.56■□□□□ 0.24
ERCC1-204ENST00000423698 CASKIN1Q8WXD9 1431 aa16.56■□□□□ 0.24
ERCC1-204ENST00000423698 ZNF608Q9ULD9 1512 aaPredicted RBP16.56■□□□□ 0.24
ERCC1-204ENST00000423698 FMN1Q68DA7 1419 aa16.54■□□□□ 0.24
ERCC1-204ENST00000423698 ABCA5Q8WWZ7 1642 aa16.53■□□□□ 0.24
ERCC1-204ENST00000423698 CTTNBP2Q8WZ74 1663 aa16.53■□□□□ 0.24
ERCC1-204ENST00000423698 CCDC18Q5T9S5 1454 aa16.53■□□□□ 0.24
ERCC1-204ENST00000423698 NCOA2Q15596 1464 aa16.52■□□□□ 0.23
ERCC1-204ENST00000423698 FYCO1Q9BQS8 1478 aa16.52■□□□□ 0.23
ERCC1-204ENST00000423698 EFCAB5A4FU69 1503 aa16.51■□□□□ 0.23
ERCC1-204ENST00000423698 MRC2Q9UBG0 1479 aa16.48■□□□□ 0.23
ERCC1-204ENST00000423698 CDK13Q14004 1512 aaKnown RBP16.48■□□□□ 0.23
ERCC1-204ENST00000423698 MSH5O43196 834 aa16.48■□□□□ 0.23
ERCC1-204ENST00000423698 ERCC6Q03468 1493 aa16.47■□□□□ 0.23
ERCC1-204ENST00000423698 MAP3K1Q13233 1512 aa16.47■□□□□ 0.23
ERCC1-204ENST00000423698 SNAPC4Q5SXM2 1469 aa16.46■□□□□ 0.23
ERCC1-204ENST00000423698 HSPA5P11021 654 aaKnown RBP16.46■□□□□ 0.23
ERCC1-204ENST00000423698 HNRNPUQ00839 825 aaKnown RBP eCLIP16.46■□□□□ 0.23
ERCC1-204ENST00000423698 TARBP1Q13395 1621 aaKnown RBP16.46■□□□□ 0.23
ERCC1-204ENST00000423698 CFAP43Q8NDM7 1665 aa16.46■□□□□ 0.23
ERCC1-204ENST00000423698 MYOM3Q5VTT5 1437 aa16.43■□□□□ 0.22
ERCC1-204ENST00000423698 L3MBTL2Q969R5 705 aa16.43■□□□□ 0.22
ERCC1-204ENST00000423698 NAIPQ13075 1403 aa16.43■□□□□ 0.22
ERCC1-204ENST00000423698 CCDC184Q52MB2 194 aa16.43■□□□□ 0.22
ERCC1-204ENST00000423698 CHMP7Q8WUX9 453 aaPredicted RBP16.43■□□□□ 0.22
ERCC1-204ENST00000423698 FAM9BQ8IZU0 186 aa16.43■□□□□ 0.22
ERCC1-204ENST00000423698 MPHOSPH9Q99550 1183 aa16.43■□□□□ 0.22
ERCC1-204ENST00000423698 MAGI3Q5TCQ9 1506 aa16.42■□□□□ 0.22
ERCC1-204ENST00000423698 SLC4A1APQ9BWU0 796 aaKnown RBP16.41■□□□□ 0.22
ERCC1-204ENST00000423698 NEFLP07196 543 aa16.4■□□□□ 0.22
ERCC1-204ENST00000423698 C11orf95C9JLR9 678 aaPredicted RBP16.39■□□□□ 0.21
ERCC1-204ENST00000423698 PBRM1Q86U86 1689 aa16.38■□□□□ 0.21
ERCC1-204ENST00000423698 GRIN2BQ13224 1484 aa16.38■□□□□ 0.21
ERCC1-204ENST00000423698 LRRIQ1Q96JM4 1722 aa16.37■□□□□ 0.21
ERCC1-204ENST00000423698 HFM1A2PYH4 1435 aa16.37■□□□□ 0.21
ERCC1-204ENST00000423698 UACAQ9BZF9 1416 aa16.37■□□□□ 0.21
ERCC1-204ENST00000423698 WASHC2AQ641Q2 1341 aa16.36■□□□□ 0.21
ERCC1-204ENST00000423698 SAMD9Q5K651 1589 aa16.36■□□□□ 0.21
ERCC1-204ENST00000423698 DAXXQ9UER7 740 aaPredicted RBP16.35■□□□□ 0.21
ERCC1-204ENST00000423698 KDM2AQ9Y2K7 1162 aa16.34■□□□□ 0.21
ERCC1-204ENST00000423698 ADAMTS12P58397 1594 aa16.34■□□□□ 0.21
ERCC1-204ENST00000423698 NBPF8Q3BBV2 869 aa16.34■□□□□ 0.21
ERCC1-204ENST00000423698 KDM6BO15054 1643 aa16.34■□□□□ 0.21
ERCC1-204ENST00000423698 PTPN23Q9H3S7 1636 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms