RNA–Protein interactions for RNA: ENST00000422289.3

LONRF3-203, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 2 BASIC

Gene LONRF3, Length 2,898 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-203ENST00000422289 RAB3GAP2Q9H2M9 1393 aa23.55■■□□□ 1.36
LONRF3-203ENST00000422289 NESP48681 1621 aa23.52■■□□□ 1.36
LONRF3-203ENST00000422289 PHLDB1Q86UU1 1377 aa23.51■■□□□ 1.35
LONRF3-203ENST00000422289 TIAM1Q13009 1591 aa23.51■■□□□ 1.35
LONRF3-203ENST00000422289 FHOD3Q2V2M9 1422 aa23.49■■□□□ 1.35
LONRF3-203ENST00000422289 LRRC9Q6ZRR7 1453 aa23.46■■□□□ 1.35
LONRF3-203ENST00000422289 SIN3AQ96ST3 1273 aa23.45■■□□□ 1.34
LONRF3-203ENST00000422289 POLA1P09884 1462 aaPredicted RBP23.4■■□□□ 1.34
LONRF3-203ENST00000422289 PCF11O94913 1555 aaKnown RBP23.4■■□□□ 1.34
LONRF3-203ENST00000422289 SETD5Q9C0A6 1442 aa23.38■■□□□ 1.33
LONRF3-203ENST00000422289 FHAD1B1AJZ9 1412 aa23.38■■□□□ 1.33
LONRF3-203ENST00000422289 TOPBP1Q92547 1522 aa23.37■■□□□ 1.33
LONRF3-203ENST00000422289 MAPKBP1O60336 1514 aa23.37■■□□□ 1.33
LONRF3-203ENST00000422289 DNAJC5BQ9UF47 199 aa23.35■■□□□ 1.33
LONRF3-203ENST00000422289 KCNH8Q96L42 1107 aa23.34■■□□□ 1.33
LONRF3-203ENST00000422289 DNMBPQ6XZF7 1577 aa23.33■■□□□ 1.33
LONRF3-203ENST00000422289 HIRIP3Q9BW71 556 aaPredicted RBP23.33■■□□□ 1.32
LONRF3-203ENST00000422289 TDRD9Q8NDG6 1382 aaKnown RBP23.32■■□□□ 1.32
LONRF3-203ENST00000422289 MAP3K1Q13233 1512 aa23.31■■□□□ 1.32
LONRF3-203ENST00000422289 ABCA10Q8WWZ4 1543 aa23.3■■□□□ 1.32
LONRF3-203ENST00000422289 DDX10Q13206 875 aaKnown RBP23.24■■□□□ 1.31
LONRF3-203ENST00000422289 CFAP43Q8NDM7 1665 aa23.23■■□□□ 1.31
LONRF3-203ENST00000422289 WDR97A6NE52 1622 aa23.21■■□□□ 1.31
LONRF3-203ENST00000422289 URB2Q14146 1524 aaKnown RBP23.21■■□□□ 1.31
LONRF3-203ENST00000422289 CASKIN1Q8WXD9 1431 aa23.2■■□□□ 1.3
LONRF3-203ENST00000422289 FYCO1Q9BQS8 1478 aa23.19■■□□□ 1.3
LONRF3-203ENST00000422289 MTUS2Q5JR59 1369 aa23.18■■□□□ 1.3
LONRF3-203ENST00000422289 ARID3CA6NKF2 412 aa23.15■■□□□ 1.3
LONRF3-203ENST00000422289 EFCAB5A4FU69 1503 aa23.13■■□□□ 1.29
LONRF3-203ENST00000422289 CUL7Q14999 1698 aa23.12■■□□□ 1.29
LONRF3-203ENST00000422289 FMN1Q68DA7 1419 aa23.11■■□□□ 1.29
LONRF3-203ENST00000422289 CTTNBP2Q8WZ74 1663 aa23.11■■□□□ 1.29
LONRF3-203ENST00000422289 FGD6Q6ZV73 1430 aa23.11■■□□□ 1.29
LONRF3-203ENST00000422289 SUPT16HQ9Y5B9 1047 aaKnown RBP23.11■■□□□ 1.29
LONRF3-203ENST00000422289 GAPVD1Q14C86 1478 aa23.09■■□□□ 1.29
LONRF3-203ENST00000422289 PTPRKQ15262 1439 aa23.08■■□□□ 1.29
LONRF3-203ENST00000422289 SNAPC4Q5SXM2 1469 aa23.08■■□□□ 1.28
LONRF3-203ENST00000422289 PPP1R15AO75807 674 aaPredicted RBP23.06■■□□□ 1.28
LONRF3-203ENST00000422289 CHIC2Q9UKJ5 165 aa23.06■■□□□ 1.28
LONRF3-203ENST00000422289 AQRO60306 1485 aaKnown RBP eCLIP23.05■■□□□ 1.283e-9■■■■□ 21.5
LONRF3-203ENST00000422289 LAMC3Q9Y6N6 1575 aa23.02■■□□□ 1.28
LONRF3-203ENST00000422289 RRP7BPQ9NSQ0 103 aa23.01■■□□□ 1.27
LONRF3-203ENST00000422289 CCDC18Q5T9S5 1454 aa23.01■■□□□ 1.27
LONRF3-203ENST00000422289 TONSLQ96HA7 1378 aa23■■□□□ 1.27
LONRF3-203ENST00000422289 NCOA2Q15596 1464 aa22.99■■□□□ 1.27
LONRF3-203ENST00000422289 PDS5BQ9NTI5 1447 aa22.99■■□□□ 1.27
LONRF3-203ENST00000422289 ABCA5Q8WWZ7 1642 aa22.98■■□□□ 1.27
LONRF3-203ENST00000422289 LRRIQ1Q96JM4 1722 aa22.97■■□□□ 1.27
LONRF3-203ENST00000422289 BCANQ96GW7 911 aa22.96■■□□□ 1.27
LONRF3-203ENST00000422289 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.96■■□□□ 1.27
LONRF3-203ENST00000422289 GRIN2BQ13224 1484 aa22.93■■□□□ 1.26
LONRF3-203ENST00000422289 KIF21AQ7Z4S6 1674 aa22.93■■□□□ 1.26
LONRF3-203ENST00000422289 MYOM3Q5VTT5 1437 aa22.93■■□□□ 1.26
LONRF3-203ENST00000422289 SAMD9Q5K651 1589 aa22.93■■□□□ 1.26
LONRF3-203ENST00000422289 TIMELESSQ9UNS1 1208 aa22.92■■□□□ 1.26
LONRF3-203ENST00000422289 TRIM52Q96A61 297 aa22.91■■□□□ 1.26
LONRF3-203ENST00000422289 HFM1A2PYH4 1435 aa22.91■■□□□ 1.26
LONRF3-203ENST00000422289 NAIPQ13075 1403 aa22.91■■□□□ 1.26
LONRF3-203ENST00000422289 PTPN23Q9H3S7 1636 aa22.89■■□□□ 1.25
LONRF3-203ENST00000422289 MAGI3Q5TCQ9 1506 aa22.88■■□□□ 1.25
LONRF3-203ENST00000422289 UACAQ9BZF9 1416 aa22.88■■□□□ 1.25
LONRF3-203ENST00000422289 ANP32CO43423 234 aa22.87■■□□□ 1.25
LONRF3-203ENST00000422289 FOXD1Q16676 465 aa22.83■■□□□ 1.25
LONRF3-203ENST00000422289 SUPT6HQ7KZ85 1726 aaKnown RBP22.83■■□□□ 1.25
LONRF3-203ENST00000422289 FKBP8Q14318 412 aa22.81■■□□□ 1.24
LONRF3-203ENST00000422289 BCL11AQ9H165 835 aa22.81■■□□□ 1.24
LONRF3-203ENST00000422289 TARBP1Q13395 1621 aaKnown RBP22.81■■□□□ 1.24
LONRF3-203ENST00000422289 CDK13Q14004 1512 aaKnown RBP22.81■■□□□ 1.24
LONRF3-203ENST00000422289 EHBP1L1Q8N3D4 1523 aa22.81■■□□□ 1.24
LONRF3-203ENST00000422289 UGGT2Q9NYU1 1516 aa22.78■■□□□ 1.24
LONRF3-203ENST00000422289 EPRSP07814 1512 aaKnown RBP22.73■■□□□ 1.23
LONRF3-203ENST00000422289 KDM6BO15054 1643 aa22.72■■□□□ 1.23
LONRF3-203ENST00000422289 IQGAP2Q13576 1575 aa22.72■■□□□ 1.23
LONRF3-203ENST00000422289 THOC2Q8NI27 1593 aaKnown RBP22.71■■□□□ 1.23
LONRF3-203ENST00000422289 ZNF644Q9H582 1327 aaPredicted RBP22.71■■□□□ 1.23
LONRF3-203ENST00000422289 ZNF608Q9ULD9 1512 aaPredicted RBP22.7■■□□□ 1.22
LONRF3-203ENST00000422289 PBRM1Q86U86 1689 aa22.7■■□□□ 1.22
LONRF3-203ENST00000422289 TSHZ2Q9NRE2 1034 aa22.7■■□□□ 1.22
LONRF3-203ENST00000422289 CCER2I3L3R5 266 aa22.69■■□□□ 1.22
LONRF3-203ENST00000422289 HSPA5P11021 654 aaKnown RBP22.69■■□□□ 1.22
LONRF3-203ENST00000422289 MPHOSPH9Q99550 1183 aa22.69■■□□□ 1.22
LONRF3-203ENST00000422289 ARHGEF11O15085 1522 aa22.68■■□□□ 1.22
LONRF3-203ENST00000422289 HECW1Q76N89 1606 aa22.67■■□□□ 1.22
LONRF3-203ENST00000422289 DENND4BO75064 1496 aaPredicted RBP22.67■■□□□ 1.22
LONRF3-203ENST00000422289 KDM5BQ9UGL1 1544 aa22.66■■□□□ 1.22
LONRF3-203ENST00000422289 ADAMTS12P58397 1594 aa22.65■■□□□ 1.22
LONRF3-203ENST00000422289 L3MBTL2Q969R5 705 aa22.64■■□□□ 1.22
LONRF3-203ENST00000422289 WASHC2AQ641Q2 1341 aa22.63■■□□□ 1.21
LONRF3-203ENST00000422289 MRC2Q9UBG0 1479 aa22.62■■□□□ 1.21
LONRF3-203ENST00000422289 TCOF1Q13428 1488 aaKnown RBP22.61■■□□□ 1.21
LONRF3-203ENST00000422289 FBLN2P98095 1184 aa22.61■■□□□ 1.21
LONRF3-203ENST00000422289 NEFLP07196 543 aa22.61■■□□□ 1.21
LONRF3-203ENST00000422289 WDR62O43379 1518 aa22.6■■□□□ 1.21
LONRF3-203ENST00000422289 HNRNPUQ00839 825 aaKnown RBP eCLIP22.59■■□□□ 1.21
LONRF3-203ENST00000422289 EIF4G2P78344 907 aaKnown RBP eCLIP22.57■■□□□ 1.2
LONRF3-203ENST00000422289 ZNF777Q9ULD5 760 aaPredicted RBP22.57■■□□□ 1.2
LONRF3-203ENST00000422289 C11orf95C9JLR9 678 aaPredicted RBP22.56■■□□□ 1.2
LONRF3-203ENST00000422289 CNGB1Q14028 1251 aaPredicted RBP22.56■■□□□ 1.2
LONRF3-203ENST00000422289 MIA2Q96PC5 1412 aa22.54■■□□□ 1.2
LONRF3-203ENST00000422289 SLC4A1APQ9BWU0 796 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms