RNA–Protein interactions for RNA: ENST00000421538.1

LINC00899-201, long intergenic non-protein coding RNA 899, humanhuman

TSL 1 (best)

Gene LINC00899, Length 2,584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00899-201ENST00000421538 ABCA5Q8WWZ7 1642 aa20.71■□□□□ 0.91
LINC00899-201ENST00000421538 VPS8Q8N3P4 1428 aa20.7■□□□□ 0.9
LINC00899-201ENST00000421538 GAPVD1Q14C86 1478 aa20.69■□□□□ 0.9
LINC00899-201ENST00000421538 ERCC6Q03468 1493 aa20.67■□□□□ 0.9
LINC00899-201ENST00000421538 WDR62O43379 1518 aa20.67■□□□□ 0.9
LINC00899-201ENST00000421538 ARAP1Q96P48 1450 aa20.66■□□□□ 0.9
LINC00899-201ENST00000421538 CUL7Q14999 1698 aa20.65■□□□□ 0.9
LINC00899-201ENST00000421538 ARHGAP35Q9NRY4 1499 aa20.62■□□□□ 0.89
LINC00899-201ENST00000421538 MIER1Q8N108 512 aa20.61■□□□□ 0.89
LINC00899-201ENST00000421538 AQRO60306 1485 aaKnown RBP eCLIP20.6■□□□□ 0.89
LINC00899-201ENST00000421538 HNRNPUL2Q1KMD3 747 aaKnown RBP20.58■□□□□ 0.89
LINC00899-201ENST00000421538 THOC2Q8NI27 1593 aaKnown RBP20.58■□□□□ 0.89
LINC00899-201ENST00000421538 ZNF608Q9ULD9 1512 aaPredicted RBP20.56■□□□□ 0.88
LINC00899-201ENST00000421538 IFT140Q96RY7 1462 aa20.55■□□□□ 0.88
LINC00899-201ENST00000421538 PBRM1Q86U86 1689 aa20.53■□□□□ 0.88
LINC00899-201ENST00000421538 CTTNBP2Q8WZ74 1663 aa20.48■□□□□ 0.87
LINC00899-201ENST00000421538 APLP2Q06481 763 aa20.48■□□□□ 0.87
LINC00899-201ENST00000421538 GRIN2BQ13224 1484 aa20.46■□□□□ 0.87
LINC00899-201ENST00000421538 P3H3Q8IVL6 736 aa20.45■□□□□ 0.86
LINC00899-201ENST00000421538 FHAD1B1AJZ9 1412 aa20.44■□□□□ 0.86
LINC00899-201ENST00000421538 ADAMTS12P58397 1594 aa20.43■□□□□ 0.86
LINC00899-201ENST00000421538 EIF4G3O43432 1585 aaKnown RBP20.42■□□□□ 0.86
LINC00899-201ENST00000421538 CLSPNQ9HAW4 1339 aa20.42■□□□□ 0.86
LINC00899-201ENST00000421538 KANK4Q5T7N3 995 aaPredicted RBP20.4■□□□□ 0.86
LINC00899-201ENST00000421538 FHOD3Q2V2M9 1422 aa20.39■□□□□ 0.85
LINC00899-201ENST00000421538 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
LINC00899-201ENST00000421538 EFCAB5A4FU69 1503 aa20.36■□□□□ 0.85
LINC00899-201ENST00000421538 SUPT16HQ9Y5B9 1047 aaKnown RBP20.31■□□□□ 0.84
LINC00899-201ENST00000421538 PCF11O94913 1555 aaKnown RBP20.29■□□□□ 0.84
LINC00899-201ENST00000421538 SAMD9Q5K651 1589 aa20.29■□□□□ 0.84
LINC00899-201ENST00000421538 ANP32EQ9BTT0 268 aa20.26■□□□□ 0.83
LINC00899-201ENST00000421538 TIAM1Q13009 1591 aa20.25■□□□□ 0.83
LINC00899-201ENST00000421538 IQGAP2Q13576 1575 aa20.25■□□□□ 0.83
LINC00899-201ENST00000421538 GRIN2AQ12879 1464 aa20.24■□□□□ 0.83
LINC00899-201ENST00000421538 MAGI1Q96QZ7 1491 aaPredicted RBP20.24■□□□□ 0.83
LINC00899-201ENST00000421538 ATP1B4Q9UN42 357 aaPredicted RBP20.24■□□□□ 0.83
LINC00899-201ENST00000421538 MAP3K1Q13233 1512 aa20.22■□□□□ 0.83
LINC00899-201ENST00000421538 CASKIN1Q8WXD9 1431 aa20.21■□□□□ 0.83
LINC00899-201ENST00000421538 FMN1Q68DA7 1419 aa20.2■□□□□ 0.82
LINC00899-201ENST00000421538 TSHZ2Q9NRE2 1034 aa20.2■□□□□ 0.82
LINC00899-201ENST00000421538 FYCO1Q9BQS8 1478 aa20.2■□□□□ 0.82
LINC00899-201ENST00000421538 SYNJ2O15056 1496 aa20.19■□□□□ 0.82
LINC00899-201ENST00000421538 CHMP7Q8WUX9 453 aaPredicted RBP20.19■□□□□ 0.82
LINC00899-201ENST00000421538 FBLN2P98095 1184 aa20.18■□□□□ 0.82
LINC00899-201ENST00000421538 DHX57Q6P158 1386 aaKnown RBP20.17■□□□□ 0.82
LINC00899-201ENST00000421538 KIAA0586Q9BVV6 1533 aa20.17■□□□□ 0.82
LINC00899-201ENST00000421538 LRRC9Q6ZRR7 1453 aa20.17■□□□□ 0.82
LINC00899-201ENST00000421538 CFAP43Q8NDM7 1665 aa20.16■□□□□ 0.82
LINC00899-201ENST00000421538 UGGT2Q9NYU1 1516 aa20.14■□□□□ 0.81
LINC00899-201ENST00000421538 CEP170Q5SW79 1584 aa20.14■□□□□ 0.81
LINC00899-201ENST00000421538 BCL11AQ9H165 835 aa20.14■□□□□ 0.81
LINC00899-201ENST00000421538 RRBP1Q9P2E9 1410 aaKnown RBP20.1■□□□□ 0.81
LINC00899-201ENST00000421538 LRRIQ1Q96JM4 1722 aa20.1■□□□□ 0.81
LINC00899-201ENST00000421538 DISP1Q96F81 1524 aa20.09■□□□□ 0.81
LINC00899-201ENST00000421538 NUP160Q12769 1436 aa20.07■□□□□ 0.8
LINC00899-201ENST00000421538 PHLDB1Q86UU1 1377 aa20.06■□□□□ 0.8
LINC00899-201ENST00000421538 KIAA0556O60303 1618 aa20.05■□□□□ 0.8
LINC00899-201ENST00000421538 CCNB3Q8WWL7 1395 aa20.05■□□□□ 0.8
LINC00899-201ENST00000421538 JPH4Q96JJ6 628 aa19.99■□□□□ 0.79
LINC00899-201ENST00000421538 MTUS2Q5JR59 1369 aa19.98■□□□□ 0.79
LINC00899-201ENST00000421538 ITGAEP38570 1179 aa19.97■□□□□ 0.79
LINC00899-201ENST00000421538 HECW1Q76N89 1606 aa19.97■□□□□ 0.79
LINC00899-201ENST00000421538 ARID3CA6NKF2 412 aa19.95■□□□□ 0.78
LINC00899-201ENST00000421538 MAGI3Q5TCQ9 1506 aa19.95■□□□□ 0.78
LINC00899-201ENST00000421538 CHD1O14646 1710 aa19.95■□□□□ 0.78
LINC00899-201ENST00000421538 EPRSP07814 1512 aaKnown RBP19.95■□□□□ 0.78
LINC00899-201ENST00000421538 CDK13Q14004 1512 aaKnown RBP19.93■□□□□ 0.78
LINC00899-201ENST00000421538 CCDC18Q5T9S5 1454 aa19.93■□□□□ 0.78
LINC00899-201ENST00000421538 FAM50AQ14320 339 aaKnown RBP19.89■□□□□ 0.77
LINC00899-201ENST00000421538 CARMIL2Q6F5E8 1435 aa19.89■□□□□ 0.77
LINC00899-201ENST00000421538 EHBP1L1Q8N3D4 1523 aa19.89■□□□□ 0.77
LINC00899-201ENST00000421538 NUP153P49790 1475 aaKnown RBP19.88■□□□□ 0.77
LINC00899-201ENST00000421538 NCOA2Q15596 1464 aa19.88■□□□□ 0.77
LINC00899-201ENST00000421538 RAPGEF6Q8TEU7 1601 aa19.88■□□□□ 0.77
LINC00899-201ENST00000421538 PLB1Q6P1J6 1458 aa19.86■□□□□ 0.77
LINC00899-201ENST00000421538 BCANQ96GW7 911 aa19.86■□□□□ 0.77
LINC00899-201ENST00000421538 SUPT6HQ7KZ85 1726 aaKnown RBP19.85■□□□□ 0.77
LINC00899-201ENST00000421538 RAB3GAP2Q9H2M9 1393 aa19.85■□□□□ 0.77
LINC00899-201ENST00000421538 FGD6Q6ZV73 1430 aa19.84■□□□□ 0.77
LINC00899-201ENST00000421538 PRG4Q92954 1404 aaPredicted RBP19.83■□□□□ 0.76
LINC00899-201ENST00000421538 ARHGEF11O15085 1522 aa19.82■□□□□ 0.76
LINC00899-201ENST00000421538 MAPKBP1O60336 1514 aa19.82■□□□□ 0.76
LINC00899-201ENST00000421538 MYOM3Q5VTT5 1437 aa19.8■□□□□ 0.76
LINC00899-201ENST00000421538 FKBP8Q14318 412 aa19.8■□□□□ 0.76
LINC00899-201ENST00000421538 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.78■□□□□ 0.76
LINC00899-201ENST00000421538 KCNH8Q96L42 1107 aa19.76■□□□□ 0.75
LINC00899-201ENST00000421538 RBM19Q9Y4C8 960 aaKnown RBP19.75■□□□□ 0.75
LINC00899-201ENST00000421538 SHROOM2Q13796 1616 aa19.74■□□□□ 0.75
LINC00899-201ENST00000421538 ABCA8O94911 1581 aa19.74■□□□□ 0.75
LINC00899-201ENST00000421538 SETD5Q9C0A6 1442 aa19.73■□□□□ 0.75
LINC00899-201ENST00000421538 NEFLP07196 543 aa19.72■□□□□ 0.75
LINC00899-201ENST00000421538 ERCC6L2Q5T890 1561 aa19.72■□□□□ 0.75
LINC00899-201ENST00000421538 PTPRGP23470 1445 aa19.71■□□□□ 0.75
LINC00899-201ENST00000421538 PTPRKQ15262 1439 aa19.71■□□□□ 0.75
LINC00899-201ENST00000421538 PTPN23Q9H3S7 1636 aa19.7■□□□□ 0.74
LINC00899-201ENST00000421538 SIN3AQ96ST3 1273 aa19.7■□□□□ 0.74
LINC00899-201ENST00000421538 CDK11AQ9UQ88 783 aaPredicted RBP19.69■□□□□ 0.74
LINC00899-201ENST00000421538 CLASP1Q7Z460 1538 aa19.68■□□□□ 0.74
LINC00899-201ENST00000421538 TROQ12816 1431 aaPredicted RBP19.67■□□□□ 0.74
LINC00899-201ENST00000421538 ATP10BO94823 1461 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms