RNA–Protein interactions for RNA: ENST00000420947.3

LINC02028-201, Transcript of long intergenic non-protein coding RNA 2028, humanhuman

TSL 3 BASIC

Gene LINC02028, Length 528 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02028-201ENST00000420947 CUX2O14529 1486 aa14.52□□□□□ -0.08
LINC02028-201ENST00000420947 KCNA4P22459 653 aa14.52□□□□□ -0.09
LINC02028-201ENST00000420947 ABCA10Q8WWZ4 1543 aa14.51□□□□□ -0.09
LINC02028-201ENST00000420947 TOPBP1Q92547 1522 aa14.51□□□□□ -0.09
LINC02028-201ENST00000420947 CUL7Q14999 1698 aa14.49□□□□□ -0.09
LINC02028-201ENST00000420947 IGF1RP08069 1367 aa14.46□□□□□ -0.1
LINC02028-201ENST00000420947 POLA1P09884 1462 aaPredicted RBP14.45□□□□□ -0.1
LINC02028-201ENST00000420947 WDR97A6NE52 1622 aa14.45□□□□□ -0.1
LINC02028-201ENST00000420947 APLP2Q06481 763 aa14.45□□□□□ -0.1
LINC02028-201ENST00000420947 NESP48681 1621 aa14.43□□□□□ -0.1
LINC02028-201ENST00000420947 CARMIL1Q5VZK9 1371 aa14.43□□□□□ -0.1
LINC02028-201ENST00000420947 KIF21AQ7Z4S6 1674 aa14.39□□□□□ -0.11
LINC02028-201ENST00000420947 URB2Q14146 1524 aaKnown RBP14.39□□□□□ -0.11
LINC02028-201ENST00000420947 ARAP1Q96P48 1450 aa14.37□□□□□ -0.11
LINC02028-201ENST00000420947 ABCA5Q8WWZ7 1642 aa14.37□□□□□ -0.11
LINC02028-201ENST00000420947 MAP3K1Q13233 1512 aa14.36□□□□□ -0.11
LINC02028-201ENST00000420947 CTTNBP2Q8WZ74 1663 aa14.36□□□□□ -0.11
LINC02028-201ENST00000420947 EFCAB5A4FU69 1503 aa14.36□□□□□ -0.11
LINC02028-201ENST00000420947 ARHGAP35Q9NRY4 1499 aa14.33□□□□□ -0.12
LINC02028-201ENST00000420947 FHAD1B1AJZ9 1412 aa14.32□□□□□ -0.12
LINC02028-201ENST00000420947 RAD54L2Q9Y4B4 1467 aa14.31□□□□□ -0.12
LINC02028-201ENST00000420947 MRC2Q9UBG0 1479 aa14.31□□□□□ -0.12
LINC02028-201ENST00000420947 TARBP1Q13395 1621 aaKnown RBP14.29□□□□□ -0.12
LINC02028-201ENST00000420947 GAPVD1Q14C86 1478 aa14.28□□□□□ -0.12
LINC02028-201ENST00000420947 TRHP20396 242 aaPredicted RBP14.27□□□□□ -0.13
LINC02028-201ENST00000420947 PPARGC1BQ86YN6 1023 aaKnown RBP14.27□□□□□ -0.13
LINC02028-201ENST00000420947 AQRO60306 1485 aaKnown RBP eCLIP14.25□□□□□ -0.13
LINC02028-201ENST00000420947 PBRM1Q86U86 1689 aa14.24□□□□□ -0.13
LINC02028-201ENST00000420947 ABCB7O75027 752 aa14.23□□□□□ -0.13
LINC02028-201ENST00000420947 WDR62O43379 1518 aa14.23□□□□□ -0.13
LINC02028-201ENST00000420947 IFT140Q96RY7 1462 aa14.21□□□□□ -0.13
LINC02028-201ENST00000420947 TIAM1Q13009 1591 aa14.21□□□□□ -0.14
LINC02028-201ENST00000420947 CFAP43Q8NDM7 1665 aa14.2□□□□□ -0.14
LINC02028-201ENST00000420947 CCER1Q8TC90 406 aaPredicted RBP14.2□□□□□ -0.14
LINC02028-201ENST00000420947 FYCO1Q9BQS8 1478 aa14.19□□□□□ -0.14
LINC02028-201ENST00000420947 FMN1Q68DA7 1419 aa14.19□□□□□ -0.14
LINC02028-201ENST00000420947 RRBP1Q9P2E9 1410 aaKnown RBP14.18□□□□□ -0.14
LINC02028-201ENST00000420947 ZNF219Q9P2Y4 722 aaPredicted RBP14.18□□□□□ -0.14
LINC02028-201ENST00000420947 SAMD9Q5K651 1589 aa14.17□□□□□ -0.14
LINC02028-201ENST00000420947 THOC2Q8NI27 1593 aaKnown RBP14.17□□□□□ -0.14
LINC02028-201ENST00000420947 GRIN2BQ13224 1484 aa14.16□□□□□ -0.14
LINC02028-201ENST00000420947 TDRD9Q8NDG6 1382 aaKnown RBP14.15□□□□□ -0.14
LINC02028-201ENST00000420947 RANGAP1P46060 587 aaPredicted RBP14.15□□□□□ -0.14
LINC02028-201ENST00000420947 CASKIN1Q8WXD9 1431 aa14.15□□□□□ -0.14
LINC02028-201ENST00000420947 ADAMTS12P58397 1594 aa14.14□□□□□ -0.15
LINC02028-201ENST00000420947 CLSPNQ9HAW4 1339 aa14.13□□□□□ -0.15
LINC02028-201ENST00000420947 SLC4A2P04920 1241 aa14.12□□□□□ -0.15
LINC02028-201ENST00000420947 PCF11O94913 1555 aaKnown RBP14.12□□□□□ -0.15
LINC02028-201ENST00000420947 LRRC9Q6ZRR7 1453 aa14.11□□□□□ -0.15
LINC02028-201ENST00000420947 TTBK1Q5TCY1 1321 aaPredicted RBP14.1□□□□□ -0.15
LINC02028-201ENST00000420947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.09□□□□□ -0.15
LINC02028-201ENST00000420947 ERCC6Q03468 1493 aa14.08□□□□□ -0.16
LINC02028-201ENST00000420947 IQGAP2Q13576 1575 aa14.08□□□□□ -0.16
LINC02028-201ENST00000420947 CCNB3Q8WWL7 1395 aa14.08□□□□□ -0.16
LINC02028-201ENST00000420947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.07□□□□□ -0.16
LINC02028-201ENST00000420947 HNRNPUL2Q1KMD3 747 aaKnown RBP14.05□□□□□ -0.16
LINC02028-201ENST00000420947 MAGI1Q96QZ7 1491 aaPredicted RBP14.05□□□□□ -0.16
LINC02028-201ENST00000420947 KANK4Q5T7N3 995 aaPredicted RBP14.04□□□□□ -0.16
LINC02028-201ENST00000420947 FHOD3Q2V2M9 1422 aa14.04□□□□□ -0.16
LINC02028-201ENST00000420947 SNAPC4Q5SXM2 1469 aa14.04□□□□□ -0.16
LINC02028-201ENST00000420947 CCDC18Q5T9S5 1454 aa14.04□□□□□ -0.16
LINC02028-201ENST00000420947 UGGT2Q9NYU1 1516 aa14.03□□□□□ -0.16
LINC02028-201ENST00000420947 EIF4G3O43432 1585 aaKnown RBP14.03□□□□□ -0.16
LINC02028-201ENST00000420947 HECW1Q76N89 1606 aa14.01□□□□□ -0.17
LINC02028-201ENST00000420947 KIAA0586Q9BVV6 1533 aa14□□□□□ -0.17
LINC02028-201ENST00000420947 EHBP1L1Q8N3D4 1523 aa13.98□□□□□ -0.17
LINC02028-201ENST00000420947 SUPT6HQ7KZ85 1726 aaKnown RBP13.98□□□□□ -0.17
LINC02028-201ENST00000420947 GRIN2AQ12879 1464 aa13.96□□□□□ -0.17
LINC02028-201ENST00000420947 RBM42Q9BTD8 480 aaKnown RBP13.96□□□□□ -0.17
LINC02028-201ENST00000420947 SYNJ2O15056 1496 aa13.95□□□□□ -0.18
LINC02028-201ENST00000420947 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
LINC02028-201ENST00000420947 SAMD1Q6SPF0 538 aaPredicted RBP13.94□□□□□ -0.18
LINC02028-201ENST00000420947 MTUS2Q5JR59 1369 aa13.93□□□□□ -0.18
LINC02028-201ENST00000420947 LRRIQ1Q96JM4 1722 aa13.93□□□□□ -0.18
LINC02028-201ENST00000420947 P3H3Q8IVL6 736 aa13.92□□□□□ -0.18
LINC02028-201ENST00000420947 KIAA0556O60303 1618 aa13.91□□□□□ -0.18
LINC02028-201ENST00000420947 PHLDB1Q86UU1 1377 aa13.91□□□□□ -0.18
LINC02028-201ENST00000420947 ACIN1Q9UKV3 1341 aaKnown RBP13.89□□□□□ -0.19
LINC02028-201ENST00000420947 DHX57Q6P158 1386 aaKnown RBP13.88□□□□□ -0.19
LINC02028-201ENST00000420947 ARHGEF11O15085 1522 aa13.88□□□□□ -0.19
LINC02028-201ENST00000420947 FGD6Q6ZV73 1430 aa13.88□□□□□ -0.19
LINC02028-201ENST00000420947 ATP1B4Q9UN42 357 aaPredicted RBP13.87□□□□□ -0.19
LINC02028-201ENST00000420947 SETD5Q9C0A6 1442 aa13.87□□□□□ -0.19
LINC02028-201ENST00000420947 NUP160Q12769 1436 aa13.86□□□□□ -0.19
LINC02028-201ENST00000420947 MYOM3Q5VTT5 1437 aa13.86□□□□□ -0.19
LINC02028-201ENST00000420947 EPRSP07814 1512 aaKnown RBP13.85□□□□□ -0.19
LINC02028-201ENST00000420947 CARMIL2Q6F5E8 1435 aa13.85□□□□□ -0.19
LINC02028-201ENST00000420947 CHRDL2Q6WN34 429 aa13.85□□□□□ -0.19
LINC02028-201ENST00000420947 NCOA2Q15596 1464 aa13.85□□□□□ -0.19
LINC02028-201ENST00000420947 DISP1Q96F81 1524 aa13.85□□□□□ -0.19
LINC02028-201ENST00000420947 RAPGEF6Q8TEU7 1601 aa13.84□□□□□ -0.19
LINC02028-201ENST00000420947 MIA2Q96PC5 1412 aa13.83□□□□□ -0.2
LINC02028-201ENST00000420947 CHMP7Q8WUX9 453 aaPredicted RBP13.82□□□□□ -0.2
LINC02028-201ENST00000420947 CEP170Q5SW79 1584 aa13.82□□□□□ -0.2
LINC02028-201ENST00000420947 TCOF1Q13428 1488 aaKnown RBP13.81□□□□□ -0.2
LINC02028-201ENST00000420947 CDK11AQ9UQ88 783 aaPredicted RBP13.81□□□□□ -0.2
LINC02028-201ENST00000420947 RAB3GAP2Q9H2M9 1393 aa13.81□□□□□ -0.2
LINC02028-201ENST00000420947 PTPN23Q9H3S7 1636 aa13.8□□□□□ -0.2
LINC02028-201ENST00000420947 ZNF316A6NFI3 1004 aaPredicted RBP13.8□□□□□ -0.2
LINC02028-201ENST00000420947 FAM50AQ14320 339 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms