RNA–Protein interactions for RNA: ENST00000419830.2

USP8-203, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 2,402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-203ENST00000419830 FANCD2Q9BXW9 1451 aa13.37□□□□□ -0.27
USP8-203ENST00000419830 CC2D2AQ9P2K1 1620 aa13.36□□□□□ -0.27
USP8-203ENST00000419830 SETD5Q9C0A6 1442 aa13.36□□□□□ -0.27
USP8-203ENST00000419830 P3H3Q8IVL6 736 aa13.35□□□□□ -0.27
USP8-203ENST00000419830 FHAD1B1AJZ9 1412 aa13.35□□□□□ -0.27
USP8-203ENST00000419830 RAD54L2Q9Y4B4 1467 aa13.34□□□□□ -0.27
USP8-203ENST00000419830 PCF11O94913 1555 aaKnown RBP13.33□□□□□ -0.27
USP8-203ENST00000419830 CFAP43Q8NDM7 1665 aa13.33□□□□□ -0.28
USP8-203ENST00000419830 ABCA10Q8WWZ4 1543 aa13.32□□□□□ -0.28
USP8-203ENST00000419830 DNMBPQ6XZF7 1577 aa13.31□□□□□ -0.28
USP8-203ENST00000419830 FHOD3Q2V2M9 1422 aa13.31□□□□□ -0.28
USP8-203ENST00000419830 POLA1P09884 1462 aaPredicted RBP13.31□□□□□ -0.28
USP8-203ENST00000419830 FAM50AQ14320 339 aaKnown RBP13.3□□□□□ -0.28
USP8-203ENST00000419830 TOPBP1Q92547 1522 aa13.3□□□□□ -0.28
USP8-203ENST00000419830 SIN3AQ96ST3 1273 aa13.29□□□□□ -0.28
USP8-203ENST00000419830 NESP48681 1621 aa13.28□□□□□ -0.28
USP8-203ENST00000419830 CASKIN1Q8WXD9 1431 aa13.28□□□□□ -0.28
USP8-203ENST00000419830 FYCO1Q9BQS8 1478 aa13.27□□□□□ -0.28
USP8-203ENST00000419830 WDR97A6NE52 1622 aa13.27□□□□□ -0.29
USP8-203ENST00000419830 AQRO60306 1485 aaKnown RBP eCLIP13.27□□□□□ -0.29
USP8-203ENST00000419830 ATP1B4Q9UN42 357 aaPredicted RBP13.27□□□□□ -0.29
USP8-203ENST00000419830 KCNH8Q96L42 1107 aa13.26□□□□□ -0.29
USP8-203ENST00000419830 EFCAB5A4FU69 1503 aa13.26□□□□□ -0.29
USP8-203ENST00000419830 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.25□□□□□ -0.29
USP8-203ENST00000419830 SUPT16HQ9Y5B9 1047 aaKnown RBP13.24□□□□□ -0.29
USP8-203ENST00000419830 CUL7Q14999 1698 aa13.23□□□□□ -0.29
USP8-203ENST00000419830 TIMELESSQ9UNS1 1208 aa13.21□□□□□ -0.29
USP8-203ENST00000419830 CTTNBP2Q8WZ74 1663 aa13.21□□□□□ -0.29
USP8-203ENST00000419830 SNAPC4Q5SXM2 1469 aa13.21□□□□□ -0.3
USP8-203ENST00000419830 URB2Q14146 1524 aaKnown RBP13.2□□□□□ -0.3
USP8-203ENST00000419830 PPP1R15AO75807 674 aaPredicted RBP13.19□□□□□ -0.3
USP8-203ENST00000419830 FGD6Q6ZV73 1430 aa13.19□□□□□ -0.3
USP8-203ENST00000419830 FMN1Q68DA7 1419 aa13.19□□□□□ -0.3
USP8-203ENST00000419830 PTPRKQ15262 1439 aa13.18□□□□□ -0.3
USP8-203ENST00000419830 DDX10Q13206 875 aaKnown RBP13.18□□□□□ -0.3
USP8-203ENST00000419830 TDRD9Q8NDG6 1382 aaKnown RBP13.17□□□□□ -0.3
USP8-203ENST00000419830 SAMD9Q5K651 1589 aa13.15□□□□□ -0.3
USP8-203ENST00000419830 ABCA5Q8WWZ7 1642 aa13.15□□□□□ -0.3
USP8-203ENST00000419830 LRRIQ1Q96JM4 1722 aa13.15□□□□□ -0.3
USP8-203ENST00000419830 HIRIP3Q9BW71 556 aaPredicted RBP13.13□□□□□ -0.31
USP8-203ENST00000419830 LAMC3Q9Y6N6 1575 aa13.13□□□□□ -0.31
USP8-203ENST00000419830 GRIN2BQ13224 1484 aa13.13□□□□□ -0.31
USP8-203ENST00000419830 MTUS2Q5JR59 1369 aa13.13□□□□□ -0.31
USP8-203ENST00000419830 HFM1A2PYH4 1435 aa13.13□□□□□ -0.31
USP8-203ENST00000419830 GAPVD1Q14C86 1478 aa13.12□□□□□ -0.31
USP8-203ENST00000419830 CCDC18Q5T9S5 1454 aa13.11□□□□□ -0.31
USP8-203ENST00000419830 NCOA2Q15596 1464 aa13.11□□□□□ -0.31
USP8-203ENST00000419830 DNAJC5BQ9UF47 199 aa13.1□□□□□ -0.31
USP8-203ENST00000419830 PTPN23Q9H3S7 1636 aa13.1□□□□□ -0.31
USP8-203ENST00000419830 UACAQ9BZF9 1416 aa13.1□□□□□ -0.31
USP8-203ENST00000419830 NAIPQ13075 1403 aa13.09□□□□□ -0.31
USP8-203ENST00000419830 MYOM3Q5VTT5 1437 aa13.09□□□□□ -0.31
USP8-203ENST00000419830 ARHGEF11O15085 1522 aa13.06□□□□□ -0.32
USP8-203ENST00000419830 MAGI3Q5TCQ9 1506 aa13.06□□□□□ -0.32
USP8-203ENST00000419830 THOC2Q8NI27 1593 aaKnown RBP13.06□□□□□ -0.32
USP8-203ENST00000419830 TONSLQ96HA7 1378 aa13.05□□□□□ -0.32
USP8-203ENST00000419830 KDM5BQ9UGL1 1544 aa13.05□□□□□ -0.32
USP8-203ENST00000419830 PDS5BQ9NTI5 1447 aa13.05□□□□□ -0.32
USP8-203ENST00000419830 CCER2I3L3R5 266 aa13.04□□□□□ -0.32
USP8-203ENST00000419830 UGGT2Q9NYU1 1516 aa13.04□□□□□ -0.32
USP8-203ENST00000419830 SUPT6HQ7KZ85 1726 aaKnown RBP13.04□□□□□ -0.32
USP8-203ENST00000419830 EHBP1L1Q8N3D4 1523 aa13.04□□□□□ -0.32
USP8-203ENST00000419830 TARBP1Q13395 1621 aaKnown RBP13.04□□□□□ -0.32
USP8-203ENST00000419830 MYT1Q01538 1121 aa13.03□□□□□ -0.32
USP8-203ENST00000419830 TSHZ2Q9NRE2 1034 aa13.03□□□□□ -0.32
USP8-203ENST00000419830 DENND4BO75064 1496 aaPredicted RBP13.01□□□□□ -0.33
USP8-203ENST00000419830 KIF21AQ7Z4S6 1674 aa13.01□□□□□ -0.33
USP8-203ENST00000419830 ANP32CO43423 234 aa13□□□□□ -0.33
USP8-203ENST00000419830 TCOF1Q13428 1488 aaKnown RBP13□□□□□ -0.33
USP8-203ENST00000419830 RRP7BPQ9NSQ0 103 aa12.99□□□□□ -0.33
USP8-203ENST00000419830 FKBP8Q14318 412 aa12.98□□□□□ -0.33
USP8-203ENST00000419830 TRIM52Q96A61 297 aa12.97□□□□□ -0.33
USP8-203ENST00000419830 CHIC2Q9UKJ5 165 aa12.97□□□□□ -0.33
USP8-203ENST00000419830 EPRSP07814 1512 aaKnown RBP12.96□□□□□ -0.33
USP8-203ENST00000419830 KDM6BO15054 1643 aa12.96□□□□□ -0.34
USP8-203ENST00000419830 BCANQ96GW7 911 aa12.96□□□□□ -0.34
USP8-203ENST00000419830 IQGAP2Q13576 1575 aa12.94□□□□□ -0.34
USP8-203ENST00000419830 GCC2Q8IWJ2 1684 aa12.94□□□□□ -0.34
USP8-203ENST00000419830 HECW1Q76N89 1606 aa12.94□□□□□ -0.34
USP8-203ENST00000419830 CDK13Q14004 1512 aaKnown RBP12.94□□□□□ -0.34
USP8-203ENST00000419830 PBRM1Q86U86 1689 aa12.94□□□□□ -0.34
USP8-203ENST00000419830 AKNAQ7Z591 1439 aa12.93□□□□□ -0.34
USP8-203ENST00000419830 MIA2Q96PC5 1412 aa12.92□□□□□ -0.34
USP8-203ENST00000419830 ADAMTS12P58397 1594 aa12.92□□□□□ -0.34
USP8-203ENST00000419830 WASHC2AQ641Q2 1341 aa12.92□□□□□ -0.34
USP8-203ENST00000419830 WDR62O43379 1518 aa12.91□□□□□ -0.34
USP8-203ENST00000419830 HSPA5P11021 654 aaKnown RBP12.91□□□□□ -0.34
USP8-203ENST00000419830 MPHOSPH9Q99550 1183 aa12.91□□□□□ -0.34
USP8-203ENST00000419830 ARID3CA6NKF2 412 aa12.9□□□□□ -0.34
USP8-203ENST00000419830 FOXD1Q16676 465 aa12.88□□□□□ -0.35
USP8-203ENST00000419830 L3MBTL2Q969R5 705 aa12.88□□□□□ -0.35
USP8-203ENST00000419830 C11orf95C9JLR9 678 aaPredicted RBP12.86□□□□□ -0.35
USP8-203ENST00000419830 MRC2Q9UBG0 1479 aa12.85□□□□□ -0.35
USP8-203ENST00000419830 ANKRD30BQ9BXX2 1392 aa12.85□□□□□ -0.35
USP8-203ENST00000419830 ZNF644Q9H582 1327 aaPredicted RBP12.85□□□□□ -0.35
USP8-203ENST00000419830 NEFLP07196 543 aa12.84□□□□□ -0.35
USP8-203ENST00000419830 EIF4G2P78344 907 aaKnown RBP eCLIP12.84□□□□□ -0.35
USP8-203ENST00000419830 DISP1Q96F81 1524 aa12.84□□□□□ -0.35
USP8-203ENST00000419830 ZNF608Q9ULD9 1512 aaPredicted RBP12.84□□□□□ -0.35
USP8-203ENST00000419830 ABCC5O15440 1437 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms