RNA–Protein interactions for RNA: ENST00000419769.6

EDRF1-206, Transcript of erythroid differentiation regulatory factor 1, humanhuman

TSL 1 (best)

Gene EDRF1, Length 4,243 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDRF1-206ENST00000419769 GOLGA3Q08378 1498 aa16.75■□□□□ 0.27
EDRF1-206ENST00000419769 PBRM1Q86U86 1689 aa16.74■□□□□ 0.27
EDRF1-206ENST00000419769 DIEXFQ68CQ4 756 aaKnown RBP16.73■□□□□ 0.27
EDRF1-206ENST00000419769 ERCC6Q03468 1493 aa16.72■□□□□ 0.27
EDRF1-206ENST00000419769 TNIKQ9UKE5 1360 aa16.71■□□□□ 0.27
EDRF1-206ENST00000419769 ZNF608Q9ULD9 1512 aaPredicted RBP16.69■□□□□ 0.26
EDRF1-206ENST00000419769 CUL7Q14999 1698 aa16.69■□□□□ 0.26
EDRF1-206ENST00000419769 TDRD9Q8NDG6 1382 aaKnown RBP16.66■□□□□ 0.26
EDRF1-206ENST00000419769 EIF4G3O43432 1585 aaKnown RBP16.66■□□□□ 0.26
EDRF1-206ENST00000419769 GAPVD1Q14C86 1478 aa16.66■□□□□ 0.26
EDRF1-206ENST00000419769 IFT140Q96RY7 1462 aa16.66■□□□□ 0.26
EDRF1-206ENST00000419769 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
EDRF1-206ENST00000419769 CEP162Q5TB80 1403 aa16.64■□□□□ 0.25
EDRF1-206ENST00000419769 AQRO60306 1485 aaKnown RBP eCLIP16.62■□□□□ 0.255e-7■■■■□ 23.3
EDRF1-206ENST00000419769 ADAMTS12P58397 1594 aa16.6■□□□□ 0.25
EDRF1-206ENST00000419769 CARMIL1Q5VZK9 1371 aa16.6■□□□□ 0.25
EDRF1-206ENST00000419769 CTTNBP2Q8WZ74 1663 aa16.58■□□□□ 0.24
EDRF1-206ENST00000419769 PRKCSHP14314 528 aaPredicted RBP16.57■□□□□ 0.24
EDRF1-206ENST00000419769 ANP32EQ9BTT0 268 aa16.54■□□□□ 0.24
EDRF1-206ENST00000419769 POLR3GLQ9BT43 218 aa16.52■□□□□ 0.24
EDRF1-206ENST00000419769 GRIN2BQ13224 1484 aa16.52■□□□□ 0.23
EDRF1-206ENST00000419769 ARAP1Q96P48 1450 aa16.49■□□□□ 0.23
EDRF1-206ENST00000419769 ARHGAP35Q9NRY4 1499 aa16.47■□□□□ 0.23
EDRF1-206ENST00000419769 CLIP1P30622 1438 aa16.47■□□□□ 0.23
EDRF1-206ENST00000419769 SNAPC4Q5SXM2 1469 aa16.46■□□□□ 0.23
EDRF1-206ENST00000419769 CNGB1Q14028 1251 aaPredicted RBP16.46■□□□□ 0.23
EDRF1-206ENST00000419769 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
EDRF1-206ENST00000419769 SAMD9Q5K651 1589 aa16.42■□□□□ 0.22
EDRF1-206ENST00000419769 MYT1LQ9UL68 1186 aa16.41■□□□□ 0.22
EDRF1-206ENST00000419769 MAGI1Q96QZ7 1491 aaPredicted RBP16.41■□□□□ 0.22
EDRF1-206ENST00000419769 CEP170Q5SW79 1584 aa16.39■□□□□ 0.21
EDRF1-206ENST00000419769 GRIN2AQ12879 1464 aa16.38■□□□□ 0.21
EDRF1-206ENST00000419769 VPS8Q8N3P4 1428 aa16.37■□□□□ 0.21
EDRF1-206ENST00000419769 SYNJ2O15056 1496 aa16.35■□□□□ 0.21
EDRF1-206ENST00000419769 CHD1O14646 1710 aa16.35■□□□□ 0.21
EDRF1-206ENST00000419769 FAM50AQ14320 339 aaKnown RBP16.35■□□□□ 0.21
EDRF1-206ENST00000419769 LRRIQ1Q96JM4 1722 aa16.33■□□□□ 0.21
EDRF1-206ENST00000419769 IQGAP2Q13576 1575 aa16.33■□□□□ 0.2
EDRF1-206ENST00000419769 EFCAB5A4FU69 1503 aa16.32■□□□□ 0.2
EDRF1-206ENST00000419769 NUP160Q12769 1436 aa16.3■□□□□ 0.2
EDRF1-206ENST00000419769 UGGT2Q9NYU1 1516 aa16.28■□□□□ 0.2
EDRF1-206ENST00000419769 PCF11O94913 1555 aaKnown RBP16.26■□□□□ 0.19
EDRF1-206ENST00000419769 KIAA0586Q9BVV6 1533 aa16.25■□□□□ 0.19
EDRF1-206ENST00000419769 DISP1Q96F81 1524 aa16.25■□□□□ 0.19
EDRF1-206ENST00000419769 FHOD3Q2V2M9 1422 aa16.23■□□□□ 0.19
EDRF1-206ENST00000419769 KIAA0556O60303 1618 aa16.21■□□□□ 0.19
EDRF1-206ENST00000419769 MIER1Q8N108 512 aa16.21■□□□□ 0.19
EDRF1-206ENST00000419769 ZNF316A6NFI3 1004 aaPredicted RBP16.21■□□□□ 0.19
EDRF1-206ENST00000419769 CFAP43Q8NDM7 1665 aa16.21■□□□□ 0.18
EDRF1-206ENST00000419769 TSHZ2Q9NRE2 1034 aa16.2■□□□□ 0.18
EDRF1-206ENST00000419769 SHROOM2Q13796 1616 aa16.2■□□□□ 0.18
EDRF1-206ENST00000419769 TRIM52Q96A61 297 aa16.2■□□□□ 0.18
EDRF1-206ENST00000419769 TIAM1Q13009 1591 aa16.16■□□□□ 0.18
EDRF1-206ENST00000419769 MAP3K1Q13233 1512 aa16.15■□□□□ 0.18
EDRF1-206ENST00000419769 CLASP1Q7Z460 1538 aa16.15■□□□□ 0.18
EDRF1-206ENST00000419769 SUPT16HQ9Y5B9 1047 aaKnown RBP16.14■□□□□ 0.17
EDRF1-206ENST00000419769 FYCO1Q9BQS8 1478 aa16.13■□□□□ 0.17
EDRF1-206ENST00000419769 DAXXQ9UER7 740 aaPredicted RBP16.13■□□□□ 0.17
EDRF1-206ENST00000419769 CASKIN1Q8WXD9 1431 aa16.12■□□□□ 0.17
EDRF1-206ENST00000419769 P3H3Q8IVL6 736 aa16.11■□□□□ 0.17
EDRF1-206ENST00000419769 CHMP7Q8WUX9 453 aaPredicted RBP16.11■□□□□ 0.17
EDRF1-206ENST00000419769 KANK4Q5T7N3 995 aaPredicted RBP16.09■□□□□ 0.17
EDRF1-206ENST00000419769 ERCC6L2Q5T890 1561 aa16.08■□□□□ 0.17
EDRF1-206ENST00000419769 SLC4A1APQ9BWU0 796 aaKnown RBP16.08■□□□□ 0.16
EDRF1-206ENST00000419769 FMN1Q68DA7 1419 aa16.07■□□□□ 0.16
EDRF1-206ENST00000419769 MAGI3Q5TCQ9 1506 aa16.06■□□□□ 0.16
EDRF1-206ENST00000419769 BCANQ96GW7 911 aa16.04■□□□□ 0.16
EDRF1-206ENST00000419769 ZNF326Q5BKZ1 582 aaKnown RBP16.04■□□□□ 0.16
EDRF1-206ENST00000419769 LRRC9Q6ZRR7 1453 aa16.03■□□□□ 0.16
EDRF1-206ENST00000419769 FBLN2P98095 1184 aa16.03■□□□□ 0.16
EDRF1-206ENST00000419769 RAPGEF6Q8TEU7 1601 aa16.02■□□□□ 0.16
EDRF1-206ENST00000419769 HECW1Q76N89 1606 aa16.01■□□□□ 0.15
EDRF1-206ENST00000419769 ABCA8O94911 1581 aa16■□□□□ 0.15
EDRF1-206ENST00000419769 JPH4Q96JJ6 628 aa16■□□□□ 0.15
EDRF1-206ENST00000419769 NUP153P49790 1475 aaKnown RBP16■□□□□ 0.15
EDRF1-206ENST00000419769 ANP32CO43423 234 aa15.99■□□□□ 0.15
EDRF1-206ENST00000419769 ARID3CA6NKF2 412 aa15.99■□□□□ 0.15
EDRF1-206ENST00000419769 EPRSP07814 1512 aaKnown RBP15.97■□□□□ 0.15
EDRF1-206ENST00000419769 PLB1Q6P1J6 1458 aa15.97■□□□□ 0.15
EDRF1-206ENST00000419769 CDK13Q14004 1512 aaKnown RBP15.97■□□□□ 0.15
EDRF1-206ENST00000419769 ARHGEF11O15085 1522 aa15.97■□□□□ 0.15
EDRF1-206ENST00000419769 PRG4Q92954 1404 aaPredicted RBP15.96■□□□□ 0.15
EDRF1-206ENST00000419769 CLSPNQ9HAW4 1339 aa15.95■□□□□ 0.14
EDRF1-206ENST00000419769 RRBP1Q9P2E9 1410 aaKnown RBP15.93■□□□□ 0.14
EDRF1-206ENST00000419769 CCDC18Q5T9S5 1454 aa15.91■□□□□ 0.14
EDRF1-206ENST00000419769 PHLDB1Q86UU1 1377 aa15.91■□□□□ 0.14
EDRF1-206ENST00000419769 CARMIL2Q6F5E8 1435 aa15.9■□□□□ 0.14
EDRF1-206ENST00000419769 EHBP1L1Q8N3D4 1523 aa15.88■□□□□ 0.13
EDRF1-206ENST00000419769 ANO8Q9HCE9 1232 aaPredicted RBP15.87■□□□□ 0.13
EDRF1-206ENST00000419769 SUPT6HQ7KZ85 1726 aaKnown RBP15.87■□□□□ 0.13
EDRF1-206ENST00000419769 ADCY10Q96PN6 1610 aa15.86■□□□□ 0.13
EDRF1-206ENST00000419769 RBM19Q9Y4C8 960 aaKnown RBP15.84■□□□□ 0.13
EDRF1-206ENST00000419769 RTL5Q5HYW3 569 aaPredicted RBP15.83■□□□□ 0.13
EDRF1-206ENST00000419769 ATP10BO94823 1461 aa15.83■□□□□ 0.12
EDRF1-206ENST00000419769 KIF14Q15058 1648 aa15.83■□□□□ 0.12
EDRF1-206ENST00000419769 NCOA2Q15596 1464 aa15.82■□□□□ 0.12
EDRF1-206ENST00000419769 ZNF777Q9ULD5 760 aaPredicted RBP15.8■□□□□ 0.12
EDRF1-206ENST00000419769 ABCC2Q92887 1545 aa15.8■□□□□ 0.12
EDRF1-206ENST00000419769 PTPRGP23470 1445 aa15.79■□□□□ 0.12
EDRF1-206ENST00000419769 FKBP8Q14318 412 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms