RNA–Protein interactions for RNA: ENST00000419169.5

SMG7-204, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2

Gene SMG7, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-204ENST00000419169 FHAD1B1AJZ9 1412 aa25.25■■□□□ 1.63
SMG7-204ENST00000419169 PHLDB1Q86UU1 1377 aa25.25■■□□□ 1.63
SMG7-204ENST00000419169 SETD5Q9C0A6 1442 aa25.24■■□□□ 1.63
SMG7-204ENST00000419169 P3H3Q8IVL6 736 aa25.24■■□□□ 1.63
SMG7-204ENST00000419169 CFAP43Q8NDM7 1665 aa25.23■■□□□ 1.63
SMG7-204ENST00000419169 PCF11O94913 1555 aaKnown RBP25.21■■□□□ 1.63
SMG7-204ENST00000419169 ATP1B4Q9UN42 357 aaPredicted RBP25.19■■□□□ 1.62
SMG7-204ENST00000419169 FANCD2Q9BXW9 1451 aa25.16■■□□□ 1.62
SMG7-204ENST00000419169 FAM50AQ14320 339 aaKnown RBP25.13■■□□□ 1.61
SMG7-204ENST00000419169 DNMBPQ6XZF7 1577 aa25.11■■□□□ 1.61
SMG7-204ENST00000419169 ABCA10Q8WWZ4 1543 aa25.09■■□□□ 1.61
SMG7-204ENST00000419169 FHOD3Q2V2M9 1422 aa25.09■■□□□ 1.61
SMG7-204ENST00000419169 FYCO1Q9BQS8 1478 aa25.08■■□□□ 1.61
SMG7-204ENST00000419169 SUPT16HQ9Y5B9 1047 aaKnown RBP25.08■■□□□ 1.61
SMG7-204ENST00000419169 EFCAB5A4FU69 1503 aa25.08■■□□□ 1.61
SMG7-204ENST00000419169 RAD54L2Q9Y4B4 1467 aa25.08■■□□□ 1.61
SMG7-204ENST00000419169 MYT1Q01538 1121 aa25.07■■□□□ 1.6
SMG7-204ENST00000419169 WDR97A6NE52 1622 aa25.06■■□□□ 1.6
SMG7-204ENST00000419169 NESP48681 1621 aa25.06■■□□□ 1.6
SMG7-204ENST00000419169 POLA1P09884 1462 aaPredicted RBP25.05■■□□□ 1.6
SMG7-204ENST00000419169 CASKIN1Q8WXD9 1431 aa25.04■■□□□ 1.6
SMG7-204ENST00000419169 SIN3AQ96ST3 1273 aa25.04■■□□□ 1.6
SMG7-204ENST00000419169 AQRO60306 1485 aaKnown RBP eCLIP25.03■■□□□ 1.61e-6■■■■□ 23
SMG7-204ENST00000419169 TOPBP1Q92547 1522 aa25.03■■□□□ 1.6
SMG7-204ENST00000419169 CUL7Q14999 1698 aa25.03■■□□□ 1.6
SMG7-204ENST00000419169 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.01■■□□□ 1.593e-7■□□□□ 9.3
SMG7-204ENST00000419169 CTTNBP2Q8WZ74 1663 aa25■■□□□ 1.59
SMG7-204ENST00000419169 TIMELESSQ9UNS1 1208 aa24.99■■□□□ 1.59
SMG7-204ENST00000419169 KCNH8Q96L42 1107 aa24.97■■□□□ 1.59
SMG7-204ENST00000419169 FMN1Q68DA7 1419 aa24.93■■□□□ 1.58
SMG7-204ENST00000419169 DDX10Q13206 875 aaKnown RBP24.91■■□□□ 1.58
SMG7-204ENST00000419169 FGD6Q6ZV73 1430 aa24.9■■□□□ 1.58
SMG7-204ENST00000419169 SNAPC4Q5SXM2 1469 aa24.9■■□□□ 1.58
SMG7-204ENST00000419169 LAMC3Q9Y6N6 1575 aa24.87■■□□□ 1.57
SMG7-204ENST00000419169 PPP1R15AO75807 674 aaPredicted RBP24.87■■□□□ 1.57
SMG7-204ENST00000419169 MTUS2Q5JR59 1369 aa24.82■■□□□ 1.56
SMG7-204ENST00000419169 SAMD9Q5K651 1589 aa24.81■■□□□ 1.56
SMG7-204ENST00000419169 CCDC18Q5T9S5 1454 aa24.81■■□□□ 1.56
SMG7-204ENST00000419169 URB2Q14146 1524 aaKnown RBP24.8■■□□□ 1.56
SMG7-204ENST00000419169 HFM1A2PYH4 1435 aa24.79■■□□□ 1.56
SMG7-204ENST00000419169 TDRD9Q8NDG6 1382 aaKnown RBP24.79■■□□□ 1.56
SMG7-204ENST00000419169 LRRIQ1Q96JM4 1722 aa24.78■■□□□ 1.56
SMG7-204ENST00000419169 HIRIP3Q9BW71 556 aaPredicted RBP24.78■■□□□ 1.56
SMG7-204ENST00000419169 ABCA5Q8WWZ7 1642 aa24.78■■□□□ 1.56
SMG7-204ENST00000419169 PTPRKQ15262 1439 aa24.77■■□□□ 1.56
SMG7-204ENST00000419169 PTPN23Q9H3S7 1636 aa24.76■■□□□ 1.55
SMG7-204ENST00000419169 UACAQ9BZF9 1416 aa24.76■■□□□ 1.55
SMG7-204ENST00000419169 TONSLQ96HA7 1378 aa24.75■■□□□ 1.55
SMG7-204ENST00000419169 GRIN2BQ13224 1484 aa24.74■■□□□ 1.55
SMG7-204ENST00000419169 NCOA2Q15596 1464 aa24.73■■□□□ 1.55
SMG7-204ENST00000419169 MYOM3Q5VTT5 1437 aa24.72■■□□□ 1.55
SMG7-204ENST00000419169 THOC2Q8NI27 1593 aaKnown RBP24.72■■□□□ 1.55
SMG7-204ENST00000419169 PDS5BQ9NTI5 1447 aa24.72■■□□□ 1.55
SMG7-204ENST00000419169 GAPVD1Q14C86 1478 aa24.71■■□□□ 1.55
SMG7-204ENST00000419169 CCER2I3L3R5 266 aa24.71■■□□□ 1.55
SMG7-204ENST00000419169 SUPT6HQ7KZ85 1726 aaKnown RBP24.69■■□□□ 1.54
SMG7-204ENST00000419169 NAIPQ13075 1403 aa24.69■■□□□ 1.54
SMG7-204ENST00000419169 TSHZ2Q9NRE2 1034 aa24.69■■□□□ 1.54
SMG7-204ENST00000419169 ANP32CO43423 234 aa24.68■■□□□ 1.54
SMG7-204ENST00000419169 EHBP1L1Q8N3D4 1523 aa24.67■■□□□ 1.54
SMG7-204ENST00000419169 KIF21AQ7Z4S6 1674 aa24.67■■□□□ 1.54
SMG7-204ENST00000419169 UGGT2Q9NYU1 1516 aa24.62■■□□□ 1.53
SMG7-204ENST00000419169 ARHGEF11O15085 1522 aa24.61■■□□□ 1.53
SMG7-204ENST00000419169 FKBP8Q14318 412 aa24.6■■□□□ 1.53
SMG7-204ENST00000419169 MAGI3Q5TCQ9 1506 aa24.58■■□□□ 1.53
SMG7-204ENST00000419169 KDM5BQ9UGL1 1544 aa24.58■■□□□ 1.53
SMG7-204ENST00000419169 BCANQ96GW7 911 aa24.58■■□□□ 1.53
SMG7-204ENST00000419169 TRIM52Q96A61 297 aa24.55■■□□□ 1.52
SMG7-204ENST00000419169 TCOF1Q13428 1488 aaKnown RBP24.53■■□□□ 1.52
SMG7-204ENST00000419169 TARBP1Q13395 1621 aaKnown RBP24.51■■□□□ 1.51
SMG7-204ENST00000419169 GCC2Q8IWJ2 1684 aa24.51■■□□□ 1.51
SMG7-204ENST00000419169 HECW1Q76N89 1606 aa24.5■■□□□ 1.51
SMG7-204ENST00000419169 CHIC2Q9UKJ5 165 aa24.5■■□□□ 1.51
SMG7-204ENST00000419169 NEFLP07196 543 aa24.49■■□□□ 1.51
SMG7-204ENST00000419169 RRP7BPQ9NSQ0 103 aa24.48■■□□□ 1.51
SMG7-204ENST00000419169 ARID3CA6NKF2 412 aa24.47■■□□□ 1.51
SMG7-204ENST00000419169 AKNAQ7Z591 1439 aa24.46■■□□□ 1.51
SMG7-204ENST00000419169 DENND4BO75064 1496 aaPredicted RBP24.46■■□□□ 1.51
SMG7-204ENST00000419169 EPRSP07814 1512 aaKnown RBP24.44■■□□□ 1.5
SMG7-204ENST00000419169 PBRM1Q86U86 1689 aa24.43■■□□□ 1.5
SMG7-204ENST00000419169 IQGAP2Q13576 1575 aa24.43■■□□□ 1.5
SMG7-204ENST00000419169 KDM6BO15054 1643 aa24.41■■□□□ 1.5
SMG7-204ENST00000419169 MIA2Q96PC5 1412 aa24.4■■□□□ 1.5
SMG7-204ENST00000419169 CDK13Q14004 1512 aaKnown RBP24.38■■□□□ 1.49
SMG7-204ENST00000419169 HSPA5P11021 654 aaKnown RBP24.37■■□□□ 1.49
SMG7-204ENST00000419169 ADAMTS12P58397 1594 aa24.37■■□□□ 1.49
SMG7-204ENST00000419169 MRC2Q9UBG0 1479 aa24.37■■□□□ 1.49
SMG7-204ENST00000419169 WASHC2AQ641Q2 1341 aa24.36■■□□□ 1.49
SMG7-204ENST00000419169 WDR62O43379 1518 aa24.36■■□□□ 1.49
SMG7-204ENST00000419169 MPHOSPH9Q99550 1183 aa24.33■■□□□ 1.48
SMG7-204ENST00000419169 EIF4G2P78344 907 aaKnown RBP eCLIP24.3■■□□□ 1.485e-7■■□□□ 11.4
SMG7-204ENST00000419169 HNRNPUQ00839 825 aaKnown RBP eCLIP24.29■■□□□ 1.48
SMG7-204ENST00000419169 ANP32EQ9BTT0 268 aa24.28■■□□□ 1.48
SMG7-204ENST00000419169 FOXD1Q16676 465 aa24.27■■□□□ 1.48
SMG7-204ENST00000419169 L3MBTL2Q969R5 705 aa24.26■■□□□ 1.47
SMG7-204ENST00000419169 CNTLNQ9NXG0 1405 aa24.25■■□□□ 1.47
SMG7-204ENST00000419169 ROCK1Q13464 1354 aa24.23■■□□□ 1.47
SMG7-204ENST00000419169 DAPK1P53355 1430 aa24.23■■□□□ 1.47
SMG7-204ENST00000419169 RBM19Q9Y4C8 960 aaKnown RBP24.21■■□□□ 1.47
SMG7-204ENST00000419169 DNMT1P26358 1616 aaKnown RBP24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms