RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 CHD1O14646 1710 aa10.97□□□□□ -0.65
ECHDC1-206ENST00000417628 C1QBPQ07021 282 aaKnown RBP10.96□□□□□ -0.65
ECHDC1-206ENST00000417628 SOCS7O14512 581 aa10.95□□□□□ -0.66
ECHDC1-206ENST00000417628 IFT140Q96RY7 1462 aa10.94□□□□□ -0.66
ECHDC1-206ENST00000417628 EIF4G3O43432 1585 aaKnown RBP10.91□□□□□ -0.66
ECHDC1-206ENST00000417628 SPDYE4A6NLX3 237 aa10.91□□□□□ -0.66
ECHDC1-206ENST00000417628 HECW2Q9P2P5 1572 aa10.9□□□□□ -0.67
ECHDC1-206ENST00000417628 POLA2Q14181 598 aa10.89□□□□□ -0.67
ECHDC1-206ENST00000417628 CAPN15O75808 1086 aa10.88□□□□□ -0.67
ECHDC1-206ENST00000417628 CLASP1Q7Z460 1538 aa10.86□□□□□ -0.67
ECHDC1-206ENST00000417628 FBLN2P98095 1184 aa10.86□□□□□ -0.67
ECHDC1-206ENST00000417628 PROM2Q8N271 834 aa10.84□□□□□ -0.67
ECHDC1-206ENST00000417628 CFTRP13569 1480 aa10.81□□□□□ -0.68
ECHDC1-206ENST00000417628 GAPVD1Q14C86 1478 aa10.81□□□□□ -0.68
ECHDC1-206ENST00000417628 SLC24A1O60721 1099 aa10.81□□□□□ -0.68
ECHDC1-206ENST00000417628 ILDR2Q71H61 639 aa10.81□□□□□ -0.68
ECHDC1-206ENST00000417628 FBXO3Q9UK99 471 aa10.78□□□□□ -0.68
ECHDC1-206ENST00000417628 SYNJ1O43426 1573 aa10.77□□□□□ -0.68
ECHDC1-206ENST00000417628 KIF13AQ9H1H9 1805 aa10.77□□□□□ -0.69
ECHDC1-206ENST00000417628 ABCB7O75027 752 aa10.75□□□□□ -0.69
ECHDC1-206ENST00000417628 CACNB1Q02641 598 aaPredicted RBP10.75□□□□□ -0.69
ECHDC1-206ENST00000417628 DISP3Q9P2K9 1392 aa10.75□□□□□ -0.69
ECHDC1-206ENST00000417628 SYNJ2O15056 1496 aa10.74□□□□□ -0.69
ECHDC1-206ENST00000417628 AQRO60306 1485 aaKnown RBP eCLIP10.74□□□□□ -0.69
ECHDC1-206ENST00000417628 MROH2BQ7Z745 1585 aa10.74□□□□□ -0.69
ECHDC1-206ENST00000417628 ADGRL1O94910 1474 aa10.74□□□□□ -0.69
ECHDC1-206ENST00000417628 KDM6BO15054 1643 aa10.73□□□□□ -0.69
ECHDC1-206ENST00000417628 TOPBP1Q92547 1522 aa10.7□□□□□ -0.7
ECHDC1-206ENST00000417628 ZBTB12Q9Y330 459 aaPredicted RBP10.69□□□□□ -0.7
ECHDC1-206ENST00000417628 VASPP50552 380 aaPredicted RBP10.67□□□□□ -0.7
ECHDC1-206ENST00000417628 SNAPC4Q5SXM2 1469 aa10.67□□□□□ -0.7
ECHDC1-206ENST00000417628 TARBP1Q13395 1621 aaKnown RBP10.66□□□□□ -0.7
ECHDC1-206ENST00000417628 DSG3P32926 999 aa10.64□□□□□ -0.71
ECHDC1-206ENST00000417628 CHMP7Q8WUX9 453 aaPredicted RBP10.64□□□□□ -0.71
ECHDC1-206ENST00000417628 ABCC10Q5T3U5 1492 aa10.62□□□□□ -0.71
ECHDC1-206ENST00000417628 FAM69CQ0P6D2 419 aa10.62□□□□□ -0.71
ECHDC1-206ENST00000417628 ABCC8Q09428 1581 aa10.61□□□□□ -0.71
ECHDC1-206ENST00000417628 PRDM2Q13029 1718 aa10.61□□□□□ -0.71
ECHDC1-206ENST00000417628 MAGI1Q96QZ7 1491 aaPredicted RBP10.6□□□□□ -0.71
ECHDC1-206ENST00000417628 DNMBPQ6XZF7 1577 aa10.6□□□□□ -0.71
ECHDC1-206ENST00000417628 SPATA31D1Q6ZQQ2 1576 aa10.6□□□□□ -0.71
ECHDC1-206ENST00000417628 IFNLR1Q8IU57 520 aaPredicted RBP10.59□□□□□ -0.71
ECHDC1-206ENST00000417628 DIP2BQ9P265 1576 aa10.58□□□□□ -0.72
ECHDC1-206ENST00000417628 WIZO95785 1651 aa10.56□□□□□ -0.72
ECHDC1-206ENST00000417628 WDR97A6NE52 1622 aa10.55□□□□□ -0.72
ECHDC1-206ENST00000417628 TDRD9Q8NDG6 1382 aaKnown RBP10.53□□□□□ -0.72
ECHDC1-206ENST00000417628 POLA1P09884 1462 aaPredicted RBP10.53□□□□□ -0.72
ECHDC1-206ENST00000417628 MAPKBP1O60336 1514 aa10.53□□□□□ -0.72
ECHDC1-206ENST00000417628 ZNF692Q9BU19 519 aaPredicted RBP10.51□□□□□ -0.73
ECHDC1-206ENST00000417628 CEP170Q5SW79 1584 aa10.5□□□□□ -0.73
ECHDC1-206ENST00000417628 GRIN2BQ13224 1484 aa10.49□□□□□ -0.73
ECHDC1-206ENST00000417628 RAD54L2Q9Y4B4 1467 aa10.49□□□□□ -0.73
ECHDC1-206ENST00000417628 SSUH2Q9Y2M2 353 aa10.48□□□□□ -0.73
ECHDC1-206ENST00000417628 SPDYE2BA6NHP3 402 aa10.47□□□□□ -0.73
ECHDC1-206ENST00000417628 SPDYE6P0CI01 402 aa10.47□□□□□ -0.73
ECHDC1-206ENST00000417628 SPDYE2Q495Y8 402 aa10.47□□□□□ -0.73
ECHDC1-206ENST00000417628 TOP2BQ02880 1626 aa10.47□□□□□ -0.73
ECHDC1-206ENST00000417628 TSPOAP1O95153 1857 aa10.46□□□□□ -0.74
ECHDC1-206ENST00000417628 SOGA1O94964 1423 aa10.44□□□□□ -0.74
ECHDC1-206ENST00000417628 NPM1P06748 294 aaKnown RBP eCLIP10.43□□□□□ -0.74
ECHDC1-206ENST00000417628 PKD2Q13563 968 aa10.43□□□□□ -0.74
ECHDC1-206ENST00000417628 SHROOM2Q13796 1616 aa10.42□□□□□ -0.74
ECHDC1-206ENST00000417628 TOP2AP11388 1531 aaKnown RBP10.41□□□□□ -0.74
ECHDC1-206ENST00000417628 CERKQ8TCT0 537 aa10.4□□□□□ -0.74
ECHDC1-206ENST00000417628 STAG3Q9UJ98 1225 aa10.39□□□□□ -0.75
ECHDC1-206ENST00000417628 PBRM1Q86U86 1689 aa10.38□□□□□ -0.75
ECHDC1-206ENST00000417628 NUP160Q12769 1436 aa10.36□□□□□ -0.75
ECHDC1-206ENST00000417628 GRIN2AQ12879 1464 aa10.36□□□□□ -0.75
ECHDC1-206ENST00000417628 SPOCK2Q92563 424 aa10.35□□□□□ -0.75
ECHDC1-206ENST00000417628 ADCY10Q96PN6 1610 aa10.34□□□□□ -0.75
ECHDC1-206ENST00000417628 KLHL34Q8N239 644 aa10.34□□□□□ -0.75
ECHDC1-206ENST00000417628 PCF11O94913 1555 aaKnown RBP10.34□□□□□ -0.75
ECHDC1-206ENST00000417628 FGD5Q6ZNL6 1462 aa10.33□□□□□ -0.76
ECHDC1-206ENST00000417628 PPRC1Q5VV67 1664 aaKnown RBP10.33□□□□□ -0.76
ECHDC1-206ENST00000417628 COL17A1Q9UMD9 1497 aaPredicted RBP10.32□□□□□ -0.76
ECHDC1-206ENST00000417628 PRG4Q92954 1404 aaPredicted RBP10.32□□□□□ -0.76
ECHDC1-206ENST00000417628 PLCB2Q00722 1185 aa10.31□□□□□ -0.76
ECHDC1-206ENST00000417628 PLCD3Q8N3E9 789 aa10.3□□□□□ -0.76
ECHDC1-206ENST00000417628 MIER1Q8N108 512 aa10.28□□□□□ -0.76
ECHDC1-206ENST00000417628 PTPRMP28827 1452 aa10.27□□□□□ -0.77
ECHDC1-206ENST00000417628 GLI2P10070 1586 aa10.26□□□□□ -0.77
ECHDC1-206ENST00000417628 CCDC88BA6NC98 1476 aa10.25□□□□□ -0.77
ECHDC1-206ENST00000417628 ADAMTS12P58397 1594 aa10.25□□□□□ -0.77
ECHDC1-206ENST00000417628 TEX14Q8IWB6 1497 aa10.24□□□□□ -0.77
ECHDC1-206ENST00000417628 ABCA5Q8WWZ7 1642 aa10.24□□□□□ -0.77
ECHDC1-206ENST00000417628 ECM2O94769 699 aaPredicted RBP10.22□□□□□ -0.77
ECHDC1-206ENST00000417628 KIF21BO75037 1637 aa10.21□□□□□ -0.78
ECHDC1-206ENST00000417628 PLB1Q6P1J6 1458 aa10.18□□□□□ -0.78
ECHDC1-206ENST00000417628 ASXL2Q76L83 1435 aa10.18□□□□□ -0.78
ECHDC1-206ENST00000417628 JPH4Q96JJ6 628 aa10.18□□□□□ -0.78
ECHDC1-206ENST00000417628 MAP3K4Q9Y6R4 1608 aa10.18□□□□□ -0.78
ECHDC1-206ENST00000417628 ADAMTSL3P82987 1691 aa10.17□□□□□ -0.78
ECHDC1-206ENST00000417628 CUX1P39880 1505 aa10.17□□□□□ -0.78
ECHDC1-206ENST00000417628 ABCA10Q8WWZ4 1543 aa10.17□□□□□ -0.78
ECHDC1-206ENST00000417628 FHAD1B1AJZ9 1412 aa10.16□□□□□ -0.78
ECHDC1-206ENST00000417628 RGL2O15211 777 aa10.15□□□□□ -0.78
ECHDC1-206ENST00000417628 HSPA2P54652 639 aa10.15□□□□□ -0.78
ECHDC1-206ENST00000417628 KIAA0586Q9BVV6 1533 aa10.14□□□□□ -0.79
ECHDC1-206ENST00000417628 HAP1P54257 671 aaPredicted RBP10.14□□□□□ -0.79
ECHDC1-206ENST00000417628 RUSC2Q8N2Y8 1516 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms