RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 MAGI1Q96QZ7 1491 aaPredicted RBP13.04□□□□□ -0.32
CASP4-202ENST00000417440 SYNJ1O43426 1573 aa13.03□□□□□ -0.32
CASP4-202ENST00000417440 SYNJ2O15056 1496 aa13.03□□□□□ -0.32
CASP4-202ENST00000417440 CLASP1Q7Z460 1538 aa13.03□□□□□ -0.32
CASP4-202ENST00000417440 GAPVD1Q14C86 1478 aa13.02□□□□□ -0.33
CASP4-202ENST00000417440 WDR97A6NE52 1622 aa13.01□□□□□ -0.33
CASP4-202ENST00000417440 ZBTB22O15209 634 aa12.98□□□□□ -0.33
CASP4-202ENST00000417440 ABCA10Q8WWZ4 1543 aa12.95□□□□□ -0.34
CASP4-202ENST00000417440 PBRM1Q86U86 1689 aa12.93□□□□□ -0.34
CASP4-202ENST00000417440 FOXD4L1Q9NU39 408 aa12.93□□□□□ -0.34
CASP4-202ENST00000417440 WRNQ14191 1432 aaPredicted RBP eCLIP12.93□□□□□ -0.34
CASP4-202ENST00000417440 ABCA5Q8WWZ7 1642 aa12.9□□□□□ -0.34
CASP4-202ENST00000417440 GRIN2AQ12879 1464 aa12.9□□□□□ -0.34
CASP4-202ENST00000417440 SLC4A2P04920 1241 aa12.88□□□□□ -0.35
CASP4-202ENST00000417440 ERCC6L2Q5T890 1561 aa12.88□□□□□ -0.35
CASP4-202ENST00000417440 FHAD1B1AJZ9 1412 aa12.85□□□□□ -0.35
CASP4-202ENST00000417440 CEP170Q5SW79 1584 aa12.85□□□□□ -0.35
CASP4-202ENST00000417440 ADAMTS12P58397 1594 aa12.84□□□□□ -0.35
CASP4-202ENST00000417440 NUP160Q12769 1436 aa12.83□□□□□ -0.36
CASP4-202ENST00000417440 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
CASP4-202ENST00000417440 TOP2BQ02880 1626 aa12.82□□□□□ -0.36
CASP4-202ENST00000417440 JPH4Q96JJ6 628 aa12.8□□□□□ -0.36
CASP4-202ENST00000417440 BIVM-ERCC5R4GMW8 1640 aa12.79□□□□□ -0.36
CASP4-202ENST00000417440 PRG4Q92954 1404 aaPredicted RBP12.79□□□□□ -0.36
CASP4-202ENST00000417440 ERICH3Q5RHP9 1530 aa12.77□□□□□ -0.37
CASP4-202ENST00000417440 NPM1P06748 294 aaKnown RBP eCLIP12.75□□□□□ -0.37
CASP4-202ENST00000417440 SHROOM2Q13796 1616 aa12.73□□□□□ -0.37
CASP4-202ENST00000417440 FAM69CQ0P6D2 419 aa12.73□□□□□ -0.37
CASP4-202ENST00000417440 TTBK1Q5TCY1 1321 aaPredicted RBP12.72□□□□□ -0.37
CASP4-202ENST00000417440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.66□□□□□ -0.38
CASP4-202ENST00000417440 IGF1RP08069 1367 aa12.66□□□□□ -0.38
CASP4-202ENST00000417440 RUSC2Q8N2Y8 1516 aa12.65□□□□□ -0.38
CASP4-202ENST00000417440 MYCNP04198 464 aaPredicted RBP12.64□□□□□ -0.39
CASP4-202ENST00000417440 KIF27Q86VH2 1401 aa12.63□□□□□ -0.39
CASP4-202ENST00000417440 ABCC10Q5T3U5 1492 aa12.62□□□□□ -0.39
CASP4-202ENST00000417440 KIAA0586Q9BVV6 1533 aa12.62□□□□□ -0.39
CASP4-202ENST00000417440 KIF13AQ9H1H9 1805 aa12.61□□□□□ -0.39
CASP4-202ENST00000417440 ADCY10Q96PN6 1610 aa12.59□□□□□ -0.39
CASP4-202ENST00000417440 PTPRGP23470 1445 aa12.59□□□□□ -0.39
CASP4-202ENST00000417440 CARMIL1Q5VZK9 1371 aa12.58□□□□□ -0.4
CASP4-202ENST00000417440 MAPKBP1O60336 1514 aa12.57□□□□□ -0.4
CASP4-202ENST00000417440 DIP2BQ9P265 1576 aa12.55□□□□□ -0.4
CASP4-202ENST00000417440 CUL7Q14999 1698 aa12.54□□□□□ -0.4
CASP4-202ENST00000417440 TNIKQ9UKE5 1360 aa12.53□□□□□ -0.4
CASP4-202ENST00000417440 CARMIL2Q6F5E8 1435 aa12.53□□□□□ -0.4
CASP4-202ENST00000417440 KDM4FA0A1W2PPD8 638 aa12.52□□□□□ -0.41
CASP4-202ENST00000417440 ATXN8OSP0DMR3 200 aa12.51□□□□□ -0.41
CASP4-202ENST00000417440 KDM6BO15054 1643 aa12.51□□□□□ -0.41
CASP4-202ENST00000417440 U3KPZ7 1027 aaPredicted RBP12.5□□□□□ -0.41
CASP4-202ENST00000417440 TSPOAP1O95153 1857 aa12.49□□□□□ -0.41
CASP4-202ENST00000417440 ASXL2Q76L83 1435 aa12.48□□□□□ -0.41
CASP4-202ENST00000417440 ABCC2Q92887 1545 aa12.47□□□□□ -0.41
CASP4-202ENST00000417440 IQGAP2Q13576 1575 aa12.46□□□□□ -0.42
CASP4-202ENST00000417440 UACAQ9BZF9 1416 aa12.45□□□□□ -0.42
CASP4-202ENST00000417440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
CASP4-202ENST00000417440 HNRNPUL2Q1KMD3 747 aaKnown RBP12.45□□□□□ -0.42
CASP4-202ENST00000417440 PLB1Q6P1J6 1458 aa12.45□□□□□ -0.42
CASP4-202ENST00000417440 DISP1Q96F81 1524 aa12.42□□□□□ -0.42
CASP4-202ENST00000417440 RAPGEF2Q9Y4G8 1499 aa12.42□□□□□ -0.42
CASP4-202ENST00000417440 UHRF1BP1LA0JNW5 1464 aa12.41□□□□□ -0.42
CASP4-202ENST00000417440 SAMD1Q6SPF0 538 aaPredicted RBP12.41□□□□□ -0.42
CASP4-202ENST00000417440 EPRSP07814 1512 aaKnown RBP12.38□□□□□ -0.43
CASP4-202ENST00000417440 KCNH8Q96L42 1107 aa12.38□□□□□ -0.43
CASP4-202ENST00000417440 GLI2P10070 1586 aa12.37□□□□□ -0.43
CASP4-202ENST00000417440 UGGT2Q9NYU1 1516 aa12.37□□□□□ -0.43
CASP4-202ENST00000417440 COL17A1Q9UMD9 1497 aaPredicted RBP12.36□□□□□ -0.43
CASP4-202ENST00000417440 KDM5BQ9UGL1 1544 aa12.36□□□□□ -0.43
CASP4-202ENST00000417440 ARID3CA6NKF2 412 aa12.35□□□□□ -0.43
CASP4-202ENST00000417440 PPRC1Q5VV67 1664 aaKnown RBP12.35□□□□□ -0.43
CASP4-202ENST00000417440 ADGRL1O94910 1474 aa12.34□□□□□ -0.43
CASP4-202ENST00000417440 KIAA0556O60303 1618 aa12.34□□□□□ -0.43
CASP4-202ENST00000417440 P3H3Q8IVL6 736 aa12.34□□□□□ -0.43
CASP4-202ENST00000417440 ZCCHC11Q5TAX3 1644 aaKnown RBP12.33□□□□□ -0.43
CASP4-202ENST00000417440 TEX14Q8IWB6 1497 aa12.33□□□□□ -0.44
CASP4-202ENST00000417440 RNF39Q9H2S5 420 aa12.31□□□□□ -0.44
CASP4-202ENST00000417440 WDR7Q9Y4E6 1490 aa12.31□□□□□ -0.44
CASP4-202ENST00000417440 MAP3K4Q9Y6R4 1608 aa12.29□□□□□ -0.44
CASP4-202ENST00000417440 CD109Q6YHK3 1445 aa12.29□□□□□ -0.44
CASP4-202ENST00000417440 ILDR1Q86SU0 546 aaPredicted RBP12.29□□□□□ -0.44
CASP4-202ENST00000417440 FAM9AQ8IZU1 332 aaPredicted RBP12.29□□□□□ -0.44
CASP4-202ENST00000417440 GOLGA3Q08378 1498 aa12.28□□□□□ -0.44
CASP4-202ENST00000417440 RANGAP1P46060 587 aaPredicted RBP12.28□□□□□ -0.44
CASP4-202ENST00000417440 APLP2Q06481 763 aa12.27□□□□□ -0.45
CASP4-202ENST00000417440 ATF5Q9Y2D1 282 aaPredicted RBP12.26□□□□□ -0.45
CASP4-202ENST00000417440 ABCA8O94911 1581 aa12.24□□□□□ -0.45
CASP4-202ENST00000417440 PRXQ9BXM0 1461 aa12.24□□□□□ -0.45
CASP4-202ENST00000417440 CTTNBP2Q8WZ74 1663 aa12.23□□□□□ -0.45
CASP4-202ENST00000417440 MAGI3Q5TCQ9 1506 aa12.22□□□□□ -0.45
CASP4-202ENST00000417440 ATP10BO94823 1461 aa12.2□□□□□ -0.46
CASP4-202ENST00000417440 C1QBPQ07021 282 aaKnown RBP12.19□□□□□ -0.46
CASP4-202ENST00000417440 HECW2Q9P2P5 1572 aa12.18□□□□□ -0.46
CASP4-202ENST00000417440 CFAP43Q8NDM7 1665 aa12.17□□□□□ -0.46
CASP4-202ENST00000417440 RAPGEF3O95398 923 aa12.17□□□□□ -0.46
CASP4-202ENST00000417440 ARID4BQ4LE39 1312 aaPredicted RBP12.15□□□□□ -0.46
CASP4-202ENST00000417440 KIF21BO75037 1637 aa12.13□□□□□ -0.47
CASP4-202ENST00000417440 ARAP3Q8WWN8 1544 aa12.12□□□□□ -0.47
CASP4-202ENST00000417440 PLEKHD1A6NEE1 506 aa12.11□□□□□ -0.47
CASP4-202ENST00000417440 FHOD3Q2V2M9 1422 aa12.11□□□□□ -0.47
CASP4-202ENST00000417440 PHLDB1Q86UU1 1377 aa12.09□□□□□ -0.47
CASP4-202ENST00000417440 RAPGEF6Q8TEU7 1601 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms