RNA–Protein interactions for RNA: ENST00000415569.5

GTDC1-208, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5

Gene GTDC1, Length 2,780 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-208ENST00000415569 TRIM26Q12899 539 aaPredicted RBP7.02□□□□□ -1.29
GTDC1-208ENST00000415569 CLIP1P30622 1438 aa7.02□□□□□ -1.29
GTDC1-208ENST00000415569 UBTFP17480 764 aaKnown RBP7.02□□□□□ -1.29
GTDC1-208ENST00000415569 CUL7Q14999 1698 aa7.01□□□□□ -1.29
GTDC1-208ENST00000415569 ARAP1Q96P48 1450 aa7□□□□□ -1.29
GTDC1-208ENST00000415569 WDR62O43379 1518 aa7□□□□□ -1.29
GTDC1-208ENST00000415569 MRC2Q9UBG0 1479 aa7□□□□□ -1.29
GTDC1-208ENST00000415569 VPS8Q8N3P4 1428 aa6.99□□□□□ -1.29
GTDC1-208ENST00000415569 SLC4A2P04920 1241 aa6.98□□□□□ -1.29
GTDC1-208ENST00000415569 THOC2Q8NI27 1593 aaKnown RBP6.98□□□□□ -1.29
GTDC1-208ENST00000415569 CARMIL1Q5VZK9 1371 aa6.98□□□□□ -1.29
GTDC1-208ENST00000415569 PBRM1Q86U86 1689 aa6.97□□□□□ -1.29
GTDC1-208ENST00000415569 ARHGAP35Q9NRY4 1499 aa6.97□□□□□ -1.29
GTDC1-208ENST00000415569 CTTNBP2Q8WZ74 1663 aa6.97□□□□□ -1.29
GTDC1-208ENST00000415569 GAPVD1Q14C86 1478 aa6.95□□□□□ -1.3
GTDC1-208ENST00000415569 HRCP23327 699 aa6.94□□□□□ -1.3
GTDC1-208ENST00000415569 PPARGC1BQ86YN6 1023 aaKnown RBP6.93□□□□□ -1.3
GTDC1-208ENST00000415569 TDRD9Q8NDG6 1382 aaKnown RBP6.93□□□□□ -1.3
GTDC1-208ENST00000415569 ADAMTS12P58397 1594 aa6.93□□□□□ -1.3
GTDC1-208ENST00000415569 IFT140Q96RY7 1462 aa6.92□□□□□ -1.3
GTDC1-208ENST00000415569 SAMD9Q5K651 1589 aa6.91□□□□□ -1.3
GTDC1-208ENST00000415569 EFCAB5A4FU69 1503 aa6.9□□□□□ -1.3
GTDC1-208ENST00000415569 ZNF608Q9ULD9 1512 aaPredicted RBP6.9□□□□□ -1.3
GTDC1-208ENST00000415569 EIF4G3O43432 1585 aaKnown RBP6.9□□□□□ -1.3
GTDC1-208ENST00000415569 AQRO60306 1485 aaKnown RBP eCLIP6.89□□□□□ -1.31
GTDC1-208ENST00000415569 MAP3K1Q13233 1512 aa6.88□□□□□ -1.31
GTDC1-208ENST00000415569 CFAP43Q8NDM7 1665 aa6.88□□□□□ -1.31
GTDC1-208ENST00000415569 GRIN2BQ13224 1484 aa6.88□□□□□ -1.31
GTDC1-208ENST00000415569 ERCC6Q03468 1493 aa6.88□□□□□ -1.31
GTDC1-208ENST00000415569 DCAF8L1A6NGE4 600 aa6.88□□□□□ -1.31
GTDC1-208ENST00000415569 FHAD1B1AJZ9 1412 aa6.88□□□□□ -1.31
GTDC1-208ENST00000415569 PCF11O94913 1555 aaKnown RBP6.87□□□□□ -1.31
GTDC1-208ENST00000415569 TIAM1Q13009 1591 aa6.87□□□□□ -1.31
GTDC1-208ENST00000415569 LRRIQ1Q96JM4 1722 aa6.86□□□□□ -1.31
GTDC1-208ENST00000415569 RANGAP1P46060 587 aaPredicted RBP6.86□□□□□ -1.31
GTDC1-208ENST00000415569 SNAPC4Q5SXM2 1469 aa6.85□□□□□ -1.31
GTDC1-208ENST00000415569 MYCNP04198 464 aaPredicted RBP6.85□□□□□ -1.31
GTDC1-208ENST00000415569 FHOD3Q2V2M9 1422 aa6.84□□□□□ -1.31
GTDC1-208ENST00000415569 FYCO1Q9BQS8 1478 aa6.84□□□□□ -1.31
GTDC1-208ENST00000415569 IQGAP2Q13576 1575 aa6.84□□□□□ -1.32
GTDC1-208ENST00000415569 KANK4Q5T7N3 995 aaPredicted RBP6.83□□□□□ -1.32
GTDC1-208ENST00000415569 CASKIN1Q8WXD9 1431 aa6.83□□□□□ -1.32
GTDC1-208ENST00000415569 MAGI1Q96QZ7 1491 aaPredicted RBP6.83□□□□□ -1.32
GTDC1-208ENST00000415569 UGGT2Q9NYU1 1516 aa6.83□□□□□ -1.32
GTDC1-208ENST00000415569 TTBK1Q5TCY1 1321 aaPredicted RBP6.82□□□□□ -1.32
GTDC1-208ENST00000415569 RRBP1Q9P2E9 1410 aaKnown RBP6.82□□□□□ -1.32
GTDC1-208ENST00000415569 GRIN2AQ12879 1464 aa6.82□□□□□ -1.32
GTDC1-208ENST00000415569 LRRC9Q6ZRR7 1453 aa6.82□□□□□ -1.32
GTDC1-208ENST00000415569 CEP170Q5SW79 1584 aa6.81□□□□□ -1.32
GTDC1-208ENST00000415569 SYNJ2O15056 1496 aa6.8□□□□□ -1.32
GTDC1-208ENST00000415569 FMN1Q68DA7 1419 aa6.8□□□□□ -1.32
GTDC1-208ENST00000415569 KIAA0586Q9BVV6 1533 aa6.79□□□□□ -1.32
GTDC1-208ENST00000415569 KIAA0556O60303 1618 aa6.79□□□□□ -1.32
GTDC1-208ENST00000415569 DISP1Q96F81 1524 aa6.79□□□□□ -1.32
GTDC1-208ENST00000415569 DNAJC5Q9H3Z4 198 aa6.79□□□□□ -1.32
GTDC1-208ENST00000415569 APLP2Q06481 763 aa6.78□□□□□ -1.32
GTDC1-208ENST00000415569 NUP160Q12769 1436 aa6.78□□□□□ -1.32
GTDC1-208ENST00000415569 P3H3Q8IVL6 736 aa6.77□□□□□ -1.33
GTDC1-208ENST00000415569 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.77□□□□□ -1.33
GTDC1-208ENST00000415569 ARHGEF11O15085 1522 aa6.76□□□□□ -1.33
GTDC1-208ENST00000415569 MAGI3Q5TCQ9 1506 aa6.76□□□□□ -1.33
GTDC1-208ENST00000415569 HECW1Q76N89 1606 aa6.76□□□□□ -1.33
GTDC1-208ENST00000415569 ATXN8OSP0DMR3 200 aa6.75□□□□□ -1.33
GTDC1-208ENST00000415569 PHLDB1Q86UU1 1377 aa6.75□□□□□ -1.33
GTDC1-208ENST00000415569 ZEB1P37275 1124 aaPredicted RBP6.75□□□□□ -1.33
GTDC1-208ENST00000415569 CHD1O14646 1710 aa6.74□□□□□ -1.33
GTDC1-208ENST00000415569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.74□□□□□ -1.33
GTDC1-208ENST00000415569 CCNB3Q8WWL7 1395 aa6.74□□□□□ -1.33
GTDC1-208ENST00000415569 EHBP1L1Q8N3D4 1523 aa6.73□□□□□ -1.33
GTDC1-208ENST00000415569 CCDC18Q5T9S5 1454 aa6.73□□□□□ -1.33
GTDC1-208ENST00000415569 ATF5Q9Y2D1 282 aaPredicted RBP6.73□□□□□ -1.33
GTDC1-208ENST00000415569 EPRSP07814 1512 aaKnown RBP6.73□□□□□ -1.33
GTDC1-208ENST00000415569 SUPT6HQ7KZ85 1726 aaKnown RBP6.72□□□□□ -1.33
GTDC1-208ENST00000415569 RAPGEF6Q8TEU7 1601 aa6.72□□□□□ -1.33
GTDC1-208ENST00000415569 SHROOM2Q13796 1616 aa6.72□□□□□ -1.33
GTDC1-208ENST00000415569 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.71□□□□□ -1.34
GTDC1-208ENST00000415569 HNRNPUL2Q1KMD3 747 aaKnown RBP6.71□□□□□ -1.34
GTDC1-208ENST00000415569 U3KPZ7 1027 aaPredicted RBP6.71□□□□□ -1.34
GTDC1-208ENST00000415569 NUP153P49790 1475 aaKnown RBP6.71□□□□□ -1.34
GTDC1-208ENST00000415569 CDK13Q14004 1512 aaKnown RBP6.71□□□□□ -1.34
GTDC1-208ENST00000415569 NCOA2Q15596 1464 aa6.7□□□□□ -1.34
GTDC1-208ENST00000415569 FGD6Q6ZV73 1430 aa6.69□□□□□ -1.34
GTDC1-208ENST00000415569 ABCA8O94911 1581 aa6.69□□□□□ -1.34
GTDC1-208ENST00000415569 CHMP7Q8WUX9 453 aaPredicted RBP6.69□□□□□ -1.34
GTDC1-208ENST00000415569 CCER1Q8TC90 406 aaPredicted RBP6.69□□□□□ -1.34
GTDC1-208ENST00000415569 ADCY10Q96PN6 1610 aa6.68□□□□□ -1.34
GTDC1-208ENST00000415569 TCOF1Q13428 1488 aaKnown RBP6.68□□□□□ -1.34
GTDC1-208ENST00000415569 PTPN23Q9H3S7 1636 aa6.67□□□□□ -1.34
GTDC1-208ENST00000415569 CLASP1Q7Z460 1538 aa6.67□□□□□ -1.34
GTDC1-208ENST00000415569 MYOM3Q5VTT5 1437 aa6.67□□□□□ -1.34
GTDC1-208ENST00000415569 MTUS2Q5JR59 1369 aa6.67□□□□□ -1.34
GTDC1-208ENST00000415569 DHX57Q6P158 1386 aaKnown RBP6.67□□□□□ -1.34
GTDC1-208ENST00000415569 PLB1Q6P1J6 1458 aa6.66□□□□□ -1.34
GTDC1-208ENST00000415569 JPH4Q96JJ6 628 aa6.66□□□□□ -1.34
GTDC1-208ENST00000415569 ATP1B4Q9UN42 357 aaPredicted RBP6.66□□□□□ -1.34
GTDC1-208ENST00000415569 PTPRKQ15262 1439 aa6.66□□□□□ -1.34
GTDC1-208ENST00000415569 FKBP8Q14318 412 aa6.65□□□□□ -1.34
GTDC1-208ENST00000415569 CARMIL2Q6F5E8 1435 aa6.65□□□□□ -1.34
GTDC1-208ENST00000415569 ERCC6L2Q5T890 1561 aa6.64□□□□□ -1.35
GTDC1-208ENST00000415569 MAPKBP1O60336 1514 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms