RNA–Protein interactions for RNA: ENST00000413807.6

PCLO-202, Transcript of piccolo presynaptic cytomatrix protein, humanhuman

TSL 5

Gene PCLO, Length 748 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCLO-202ENST00000413807 CARMIL1Q5VZK9 1371 aa11.76□□□□□ -0.53
PCLO-202ENST00000413807 TNIKQ9UKE5 1360 aa11.76□□□□□ -0.53
PCLO-202ENST00000413807 AQRO60306 1485 aaKnown RBP eCLIP11.76□□□□□ -0.53
PCLO-202ENST00000413807 RAPGEF2Q9Y4G8 1499 aa11.76□□□□□ -0.53
PCLO-202ENST00000413807 GRIN2BQ13224 1484 aa11.75□□□□□ -0.53
PCLO-202ENST00000413807 RNF216Q9NWF9 866 aaPredicted RBP11.73□□□□□ -0.53
PCLO-202ENST00000413807 PBRM1Q86U86 1689 aa11.72□□□□□ -0.53
PCLO-202ENST00000413807 EIF4G3O43432 1585 aaKnown RBP11.72□□□□□ -0.53
PCLO-202ENST00000413807 FHAD1B1AJZ9 1412 aa11.69□□□□□ -0.54
PCLO-202ENST00000413807 ADAMTS12P58397 1594 aa11.68□□□□□ -0.54
PCLO-202ENST00000413807 MAGI1Q96QZ7 1491 aaPredicted RBP11.68□□□□□ -0.54
PCLO-202ENST00000413807 UBTFP17480 764 aaKnown RBP11.64□□□□□ -0.55
PCLO-202ENST00000413807 SYNJ2O15056 1496 aa11.63□□□□□ -0.55
PCLO-202ENST00000413807 SNAPC4Q5SXM2 1469 aa11.63□□□□□ -0.55
PCLO-202ENST00000413807 CEP162Q5TB80 1403 aa11.62□□□□□ -0.55
PCLO-202ENST00000413807 GRIN2AQ12879 1464 aa11.59□□□□□ -0.55
PCLO-202ENST00000413807 C1QBPQ07021 282 aaKnown RBP11.59□□□□□ -0.55
PCLO-202ENST00000413807 CTTNBP2Q8WZ74 1663 aa11.58□□□□□ -0.56
PCLO-202ENST00000413807 EHMT2Q96KQ7 1210 aa11.57□□□□□ -0.56
PCLO-202ENST00000413807 CLIP1P30622 1438 aa11.57□□□□□ -0.56
PCLO-202ENST00000413807 NUP160Q12769 1436 aa11.57□□□□□ -0.56
PCLO-202ENST00000413807 KIAA0586Q9BVV6 1533 aa11.55□□□□□ -0.56
PCLO-202ENST00000413807 ARHGAP35Q9NRY4 1499 aa11.53□□□□□ -0.56
PCLO-202ENST00000413807 CHMP7Q8WUX9 453 aaPredicted RBP11.52□□□□□ -0.57
PCLO-202ENST00000413807 CEP170Q5SW79 1584 aa11.52□□□□□ -0.57
PCLO-202ENST00000413807 EFCAB5A4FU69 1503 aa11.51□□□□□ -0.57
PCLO-202ENST00000413807 UGGT2Q9NYU1 1516 aa11.51□□□□□ -0.57
PCLO-202ENST00000413807 IQGAP2Q13576 1575 aa11.51□□□□□ -0.57
PCLO-202ENST00000413807 SAMD9Q5K651 1589 aa11.5□□□□□ -0.57
PCLO-202ENST00000413807 ARAP1Q96P48 1450 aa11.5□□□□□ -0.57
PCLO-202ENST00000413807 CHD1O14646 1710 aa11.49□□□□□ -0.57
PCLO-202ENST00000413807 VPS8Q8N3P4 1428 aa11.47□□□□□ -0.57
PCLO-202ENST00000413807 DISP1Q96F81 1524 aa11.44□□□□□ -0.58
PCLO-202ENST00000413807 SHROOM2Q13796 1616 aa11.43□□□□□ -0.58
PCLO-202ENST00000413807 CLASP1Q7Z460 1538 aa11.43□□□□□ -0.58
PCLO-202ENST00000413807 FBLN2P98095 1184 aa11.42□□□□□ -0.58
PCLO-202ENST00000413807 JPH4Q96JJ6 628 aa11.42□□□□□ -0.58
PCLO-202ENST00000413807 KIAA0556O60303 1618 aa11.39□□□□□ -0.59
PCLO-202ENST00000413807 FMN1Q68DA7 1419 aa11.39□□□□□ -0.59
PCLO-202ENST00000413807 MAP3K1Q13233 1512 aa11.39□□□□□ -0.59
PCLO-202ENST00000413807 FHOD3Q2V2M9 1422 aa11.38□□□□□ -0.59
PCLO-202ENST00000413807 CASKIN1Q8WXD9 1431 aa11.38□□□□□ -0.59
PCLO-202ENST00000413807 NCBP3Q53F19 620 aaKnown RBP11.38□□□□□ -0.59
PCLO-202ENST00000413807 RANGAP1P46060 587 aaPredicted RBP11.36□□□□□ -0.59
PCLO-202ENST00000413807 FYCO1Q9BQS8 1478 aa11.36□□□□□ -0.59
PCLO-202ENST00000413807 CARMIL2Q6F5E8 1435 aa11.35□□□□□ -0.59
PCLO-202ENST00000413807 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.34□□□□□ -0.59
PCLO-202ENST00000413807 PRG4Q92954 1404 aaPredicted RBP11.34□□□□□ -0.59
PCLO-202ENST00000413807 P3H3Q8IVL6 736 aa11.33□□□□□ -0.6
PCLO-202ENST00000413807 OSCARQ8IYS5 282 aa11.33□□□□□ -0.6
PCLO-202ENST00000413807 PCF11O94913 1555 aaKnown RBP11.32□□□□□ -0.6
PCLO-202ENST00000413807 NPM3O75607 178 aaKnown RBP11.29□□□□□ -0.6
PCLO-202ENST00000413807 ABCA8O94911 1581 aa11.28□□□□□ -0.6
PCLO-202ENST00000413807 TIAM1Q13009 1591 aa11.28□□□□□ -0.6
PCLO-202ENST00000413807 LRRIQ1Q96JM4 1722 aa11.28□□□□□ -0.6
PCLO-202ENST00000413807 ERCC6L2Q5T890 1561 aa11.28□□□□□ -0.6
PCLO-202ENST00000413807 CFAP43Q8NDM7 1665 aa11.27□□□□□ -0.6
PCLO-202ENST00000413807 RAPGEF6Q8TEU7 1601 aa11.26□□□□□ -0.61
PCLO-202ENST00000413807 PTPRGP23470 1445 aa11.26□□□□□ -0.61
PCLO-202ENST00000413807 NUP153P49790 1475 aaKnown RBP11.25□□□□□ -0.61
PCLO-202ENST00000413807 CCDC18Q5T9S5 1454 aa11.25□□□□□ -0.61
PCLO-202ENST00000413807 HECW1Q76N89 1606 aa11.25□□□□□ -0.61
PCLO-202ENST00000413807 LRRC9Q6ZRR7 1453 aa11.25□□□□□ -0.61
PCLO-202ENST00000413807 EPRSP07814 1512 aaKnown RBP11.25□□□□□ -0.61
PCLO-202ENST00000413807 KANK4Q5T7N3 995 aaPredicted RBP11.24□□□□□ -0.61
PCLO-202ENST00000413807 PLB1Q6P1J6 1458 aa11.24□□□□□ -0.61
PCLO-202ENST00000413807 APLP2Q06481 763 aa11.23□□□□□ -0.61
PCLO-202ENST00000413807 UHRF1BP1LA0JNW5 1464 aa11.23□□□□□ -0.61
PCLO-202ENST00000413807 UACAQ9BZF9 1416 aa11.21□□□□□ -0.61
PCLO-202ENST00000413807 TRIM26Q12899 539 aaPredicted RBP11.21□□□□□ -0.61
PCLO-202ENST00000413807 ARHGEF11O15085 1522 aa11.19□□□□□ -0.62
PCLO-202ENST00000413807 MAGI3Q5TCQ9 1506 aa11.19□□□□□ -0.62
PCLO-202ENST00000413807 ABCC2Q92887 1545 aa11.19□□□□□ -0.62
PCLO-202ENST00000413807 ATP10BO94823 1461 aa11.19□□□□□ -0.62
PCLO-202ENST00000413807 CDK13Q14004 1512 aaKnown RBP11.17□□□□□ -0.62
PCLO-202ENST00000413807 EHBP1L1Q8N3D4 1523 aa11.16□□□□□ -0.62
PCLO-202ENST00000413807 KDM5BQ9UGL1 1544 aa11.16□□□□□ -0.62
PCLO-202ENST00000413807 PPARGC1BQ86YN6 1023 aaKnown RBP11.16□□□□□ -0.62
PCLO-202ENST00000413807 RRBP1Q9P2E9 1410 aaKnown RBP11.15□□□□□ -0.62
PCLO-202ENST00000413807 TROQ12816 1431 aaPredicted RBP11.13□□□□□ -0.63
PCLO-202ENST00000413807 ATP1B4Q9UN42 357 aaPredicted RBP11.13□□□□□ -0.63
PCLO-202ENST00000413807 CDK11AQ9UQ88 783 aaPredicted RBP11.13□□□□□ -0.63
PCLO-202ENST00000413807 MTUS2Q5JR59 1369 aa11.13□□□□□ -0.63
PCLO-202ENST00000413807 ADCY10Q96PN6 1610 aa11.12□□□□□ -0.63
PCLO-202ENST00000413807 SUPT6HQ7KZ85 1726 aaKnown RBP11.12□□□□□ -0.63
PCLO-202ENST00000413807 U3KPZ7 1027 aaPredicted RBP11.11□□□□□ -0.63
PCLO-202ENST00000413807 PHLDB1Q86UU1 1377 aa11.11□□□□□ -0.63
PCLO-202ENST00000413807 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.11□□□□□ -0.63
PCLO-202ENST00000413807 NCOA2Q15596 1464 aa11.11□□□□□ -0.63
PCLO-202ENST00000413807 RIMBP3CA6NJZ7 1639 aa11.09□□□□□ -0.63
PCLO-202ENST00000413807 RIMBP3BA6NNM3 1639 aa11.09□□□□□ -0.63
PCLO-202ENST00000413807 RIMBP3Q9UFD9 1639 aa11.09□□□□□ -0.63
PCLO-202ENST00000413807 TTBK1Q5TCY1 1321 aaPredicted RBP11.09□□□□□ -0.63
PCLO-202ENST00000413807 PCGF6Q9BYE7 350 aa11.08□□□□□ -0.64
PCLO-202ENST00000413807 ZCCHC11Q5TAX3 1644 aaKnown RBP11.08□□□□□ -0.64
PCLO-202ENST00000413807 MYOM3Q5VTT5 1437 aa11.08□□□□□ -0.64
PCLO-202ENST00000413807 ABCC10Q5T3U5 1492 aa11.07□□□□□ -0.64
PCLO-202ENST00000413807 PLEKHD1A6NEE1 506 aa11.07□□□□□ -0.64
PCLO-202ENST00000413807 CCNB3Q8WWL7 1395 aa11.06□□□□□ -0.64
PCLO-202ENST00000413807 FGD6Q6ZV73 1430 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms