RNA–Protein interactions for RNA: ENST00000411817.2

ITGA9-202, Transcript of integrin subunit alpha 9, humanhuman

TSL 5

Gene ITGA9, Length 609 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-202ENST00000411817 WDR97A6NE52 1622 aa17.81■□□□□ 0.44
ITGA9-202ENST00000411817 TARBP1Q13395 1621 aaKnown RBP17.81■□□□□ 0.44
ITGA9-202ENST00000411817 RBM42Q9BTD8 480 aaKnown RBP17.81■□□□□ 0.44
ITGA9-202ENST00000411817 ABCA10Q8WWZ4 1543 aa17.79■□□□□ 0.44
ITGA9-202ENST00000411817 POLA2Q14181 598 aa17.79■□□□□ 0.44
ITGA9-202ENST00000411817 IFT140Q96RY7 1462 aa17.79■□□□□ 0.44
ITGA9-202ENST00000411817 EEA1Q15075 1411 aa17.74■□□□□ 0.43
ITGA9-202ENST00000411817 RUSC2Q8N2Y8 1516 aa17.74■□□□□ 0.43
ITGA9-202ENST00000411817 KIF27Q86VH2 1401 aa17.73■□□□□ 0.43
ITGA9-202ENST00000411817 ABCA5Q8WWZ7 1642 aa17.7■□□□□ 0.42
ITGA9-202ENST00000411817 FAM9AQ8IZU1 332 aaPredicted RBP17.69■□□□□ 0.42
ITGA9-202ENST00000411817 TDRD9Q8NDG6 1382 aaKnown RBP17.68■□□□□ 0.42
ITGA9-202ENST00000411817 ZNF608Q9ULD9 1512 aaPredicted RBP17.67■□□□□ 0.42
ITGA9-202ENST00000411817 GAPVD1Q14C86 1478 aa17.66■□□□□ 0.42
ITGA9-202ENST00000411817 EIF4G3O43432 1585 aaKnown RBP17.65■□□□□ 0.42
ITGA9-202ENST00000411817 CSRNP3Q8WYN3 585 aa17.63■□□□□ 0.41
ITGA9-202ENST00000411817 PBRM1Q86U86 1689 aa17.63■□□□□ 0.41
ITGA9-202ENST00000411817 AQRO60306 1485 aaKnown RBP eCLIP17.63■□□□□ 0.41
ITGA9-202ENST00000411817 SLC4A1APQ9BWU0 796 aaKnown RBP17.62■□□□□ 0.41
ITGA9-202ENST00000411817 ERICH3Q5RHP9 1530 aa17.6■□□□□ 0.41
ITGA9-202ENST00000411817 IGF1RP08069 1367 aa17.59■□□□□ 0.41
ITGA9-202ENST00000411817 GRIN2BQ13224 1484 aa17.58■□□□□ 0.41
ITGA9-202ENST00000411817 FOXD4L1Q9NU39 408 aa17.57■□□□□ 0.4
ITGA9-202ENST00000411817 CUL7Q14999 1698 aa17.56■□□□□ 0.4
ITGA9-202ENST00000411817 CHRDL2Q6WN34 429 aa17.56■□□□□ 0.4
ITGA9-202ENST00000411817 ATF5Q9Y2D1 282 aaPredicted RBP17.56■□□□□ 0.4
ITGA9-202ENST00000411817 KIF21BO75037 1637 aa17.54■□□□□ 0.4
ITGA9-202ENST00000411817 PRXQ9BXM0 1461 aa17.52■□□□□ 0.4
ITGA9-202ENST00000411817 CARMIL1Q5VZK9 1371 aa17.51■□□□□ 0.39
ITGA9-202ENST00000411817 ADAMTS12P58397 1594 aa17.49■□□□□ 0.39
ITGA9-202ENST00000411817 SNAPC4Q5SXM2 1469 aa17.49■□□□□ 0.39
ITGA9-202ENST00000411817 MAGI1Q96QZ7 1491 aaPredicted RBP17.49■□□□□ 0.39
ITGA9-202ENST00000411817 RAPGEF2Q9Y4G8 1499 aa17.47■□□□□ 0.39
ITGA9-202ENST00000411817 FHAD1B1AJZ9 1412 aa17.47■□□□□ 0.39
ITGA9-202ENST00000411817 GOLGA3Q08378 1498 aa17.46■□□□□ 0.39
ITGA9-202ENST00000411817 LOC105371045A0A1W2PR82 267 aa17.44■□□□□ 0.38
ITGA9-202ENST00000411817 EHMT2Q96KQ7 1210 aa17.43■□□□□ 0.38
ITGA9-202ENST00000411817 SYNJ2O15056 1496 aa17.4■□□□□ 0.38
ITGA9-202ENST00000411817 ZBTB12Q9Y330 459 aaPredicted RBP17.38■□□□□ 0.37
ITGA9-202ENST00000411817 GRIN2AQ12879 1464 aa17.36■□□□□ 0.37
ITGA9-202ENST00000411817 UBTFP17480 764 aaKnown RBP17.35■□□□□ 0.37
ITGA9-202ENST00000411817 CHMP7Q8WUX9 453 aaPredicted RBP17.35■□□□□ 0.37
ITGA9-202ENST00000411817 CHD1O14646 1710 aa17.35■□□□□ 0.37
ITGA9-202ENST00000411817 AKT1S1Q96B36 256 aa17.34■□□□□ 0.37
ITGA9-202ENST00000411817 TNIKQ9UKE5 1360 aa17.33■□□□□ 0.36
ITGA9-202ENST00000411817 CTTNBP2Q8WZ74 1663 aa17.32■□□□□ 0.36
ITGA9-202ENST00000411817 FBLN2P98095 1184 aa17.32■□□□□ 0.36
ITGA9-202ENST00000411817 ZBTB22O15209 634 aa17.26■□□□□ 0.35
ITGA9-202ENST00000411817 OSCARQ8IYS5 282 aa17.26■□□□□ 0.35
ITGA9-202ENST00000411817 CEP170Q5SW79 1584 aa17.26■□□□□ 0.35
ITGA9-202ENST00000411817 NUP160Q12769 1436 aa17.25■□□□□ 0.35
ITGA9-202ENST00000411817 KIAA0586Q9BVV6 1533 aa17.21■□□□□ 0.35
ITGA9-202ENST00000411817 IQGAP2Q13576 1575 aa17.21■□□□□ 0.35
ITGA9-202ENST00000411817 CEP162Q5TB80 1403 aa17.21■□□□□ 0.34
ITGA9-202ENST00000411817 REM2Q8IYK8 340 aaPredicted RBP17.2■□□□□ 0.34
ITGA9-202ENST00000411817 CLIP1P30622 1438 aa17.15■□□□□ 0.34
ITGA9-202ENST00000411817 RANGAP1P46060 587 aaPredicted RBP17.15■□□□□ 0.34
ITGA9-202ENST00000411817 CLASP1Q7Z460 1538 aa17.14■□□□□ 0.33
ITGA9-202ENST00000411817 UGGT2Q9NYU1 1516 aa17.12■□□□□ 0.33
ITGA9-202ENST00000411817 EFCAB5A4FU69 1503 aa17.11■□□□□ 0.33
ITGA9-202ENST00000411817 ARHGAP35Q9NRY4 1499 aa17.1■□□□□ 0.33
ITGA9-202ENST00000411817 SAMD9Q5K651 1589 aa17.1■□□□□ 0.33
ITGA9-202ENST00000411817 PIP4P2Q8N4L2 257 aa17.09■□□□□ 0.33
ITGA9-202ENST00000411817 SHROOM2Q13796 1616 aa17.08■□□□□ 0.32
ITGA9-202ENST00000411817 JPH4Q96JJ6 628 aa17.08■□□□□ 0.32
ITGA9-202ENST00000411817 KIAA0556O60303 1618 aa17.04■□□□□ 0.32
ITGA9-202ENST00000411817 PITPNM1O00562 1244 aa17.04■□□□□ 0.32
ITGA9-202ENST00000411817 SP7Q8TDD2 431 aaPredicted RBP17.04■□□□□ 0.32
ITGA9-202ENST00000411817 DISP1Q96F81 1524 aa17.04■□□□□ 0.32
ITGA9-202ENST00000411817 ARAP1Q96P48 1450 aa17.04■□□□□ 0.32
ITGA9-202ENST00000411817 ATXN8OSP0DMR3 200 aa17.03■□□□□ 0.32
ITGA9-202ENST00000411817 CARMIL2Q6F5E8 1435 aa17.02■□□□□ 0.31
ITGA9-202ENST00000411817 P3H3Q8IVL6 736 aa17.01■□□□□ 0.31
ITGA9-202ENST00000411817 PRG4Q92954 1404 aaPredicted RBP17.01■□□□□ 0.31
ITGA9-202ENST00000411817 FHOD3Q2V2M9 1422 aa17■□□□□ 0.31
ITGA9-202ENST00000411817 VPS8Q8N3P4 1428 aa16.96■□□□□ 0.31
ITGA9-202ENST00000411817 ERCC6L2Q5T890 1561 aa16.94■□□□□ 0.3
ITGA9-202ENST00000411817 FXR2P51116 673 aaKnown RBP eCLIP16.93■□□□□ 0.3
ITGA9-202ENST00000411817 FMN1Q68DA7 1419 aa16.93■□□□□ 0.3
ITGA9-202ENST00000411817 PCF11O94913 1555 aaKnown RBP16.89■□□□□ 0.29
ITGA9-202ENST00000411817 TTBK1Q5TCY1 1321 aaPredicted RBP16.87■□□□□ 0.29
ITGA9-202ENST00000411817 PTPRGP23470 1445 aa16.87■□□□□ 0.29
ITGA9-202ENST00000411817 CASKIN1Q8WXD9 1431 aa16.86■□□□□ 0.29
ITGA9-202ENST00000411817 FYCO1Q9BQS8 1478 aa16.86■□□□□ 0.29
ITGA9-202ENST00000411817 ARHGEF11O15085 1522 aa16.84■□□□□ 0.29
ITGA9-202ENST00000411817 RAPGEF6Q8TEU7 1601 aa16.84■□□□□ 0.29
ITGA9-202ENST00000411817 SPDYE2BA6NHP3 402 aa16.83■□□□□ 0.28
ITGA9-202ENST00000411817 HAX1O00165 279 aa16.83■□□□□ 0.28
ITGA9-202ENST00000411817 SPDYE6P0CI01 402 aa16.83■□□□□ 0.28
ITGA9-202ENST00000411817 SPDYE2Q495Y8 402 aa16.83■□□□□ 0.28
ITGA9-202ENST00000411817 HECW1Q76N89 1606 aa16.81■□□□□ 0.28
ITGA9-202ENST00000411817 ABCA8O94911 1581 aa16.81■□□□□ 0.28
ITGA9-202ENST00000411817 PLB1Q6P1J6 1458 aa16.81■□□□□ 0.28
ITGA9-202ENST00000411817 RIMBP3CA6NJZ7 1639 aa16.8■□□□□ 0.28
ITGA9-202ENST00000411817 RIMBP3BA6NNM3 1639 aa16.8■□□□□ 0.28
ITGA9-202ENST00000411817 RIMBP3Q9UFD9 1639 aa16.8■□□□□ 0.28
ITGA9-202ENST00000411817 ATP1B4Q9UN42 357 aaPredicted RBP16.79■□□□□ 0.28
ITGA9-202ENST00000411817 LRRIQ1Q96JM4 1722 aa16.79■□□□□ 0.28
ITGA9-202ENST00000411817 UACAQ9BZF9 1416 aa16.78■□□□□ 0.28
ITGA9-202ENST00000411817 CFAP43Q8NDM7 1665 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms