RNA–Protein interactions for RNA: ENST00000410056.7

SLC3A1-208, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 1,426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-208ENST00000410056 TOPBP1Q92547 1522 aa16.49■□□□□ 0.23
SLC3A1-208ENST00000410056 ARAP1Q96P48 1450 aa16.45■□□□□ 0.22
SLC3A1-208ENST00000410056 EIF4G3O43432 1585 aaKnown RBP16.45■□□□□ 0.22
SLC3A1-208ENST00000410056 CCDC88BA6NC98 1476 aa16.44■□□□□ 0.22
SLC3A1-208ENST00000410056 ABCC8Q09428 1581 aa16.41■□□□□ 0.22
SLC3A1-208ENST00000410056 AQRO60306 1485 aaKnown RBP eCLIP16.4■□□□□ 0.22
SLC3A1-208ENST00000410056 CHD1O14646 1710 aa16.39■□□□□ 0.21
SLC3A1-208ENST00000410056 TARBP1Q13395 1621 aaKnown RBP16.39■□□□□ 0.21
SLC3A1-208ENST00000410056 DNMBPQ6XZF7 1577 aa16.37■□□□□ 0.21
SLC3A1-208ENST00000410056 ZBTB12Q9Y330 459 aaPredicted RBP16.35■□□□□ 0.21
SLC3A1-208ENST00000410056 FBLN2P98095 1184 aa16.32■□□□□ 0.2
SLC3A1-208ENST00000410056 RBM42Q9BTD8 480 aaKnown RBP16.31■□□□□ 0.2
SLC3A1-208ENST00000410056 POLA1P09884 1462 aaPredicted RBP16.3■□□□□ 0.2
SLC3A1-208ENST00000410056 CLASP1Q7Z460 1538 aa16.25■□□□□ 0.19
SLC3A1-208ENST00000410056 RAD54L2Q9Y4B4 1467 aa16.24■□□□□ 0.19
SLC3A1-208ENST00000410056 TDRD9Q8NDG6 1382 aaKnown RBP16.24■□□□□ 0.19
SLC3A1-208ENST00000410056 SOGA1O94964 1423 aa16.21■□□□□ 0.19
SLC3A1-208ENST00000410056 SNAPC4Q5SXM2 1469 aa16.2■□□□□ 0.18
SLC3A1-208ENST00000410056 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
SLC3A1-208ENST00000410056 WDR97A6NE52 1622 aa16.16■□□□□ 0.18
SLC3A1-208ENST00000410056 SYNJ1O43426 1573 aa16.16■□□□□ 0.18
SLC3A1-208ENST00000410056 CHMP7Q8WUX9 453 aaPredicted RBP16.16■□□□□ 0.18
SLC3A1-208ENST00000410056 MAGI1Q96QZ7 1491 aaPredicted RBP16.15■□□□□ 0.18
SLC3A1-208ENST00000410056 FGD5Q6ZNL6 1462 aa16.12■□□□□ 0.17
SLC3A1-208ENST00000410056 GRIN2BQ13224 1484 aa16.11■□□□□ 0.17
SLC3A1-208ENST00000410056 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
SLC3A1-208ENST00000410056 GAPVD1Q14C86 1478 aa16.09■□□□□ 0.17
SLC3A1-208ENST00000410056 CUX1P39880 1505 aa16.06■□□□□ 0.16
SLC3A1-208ENST00000410056 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
SLC3A1-208ENST00000410056 ERCC6L2Q5T890 1561 aa15.97■□□□□ 0.15
SLC3A1-208ENST00000410056 PBRM1Q86U86 1689 aa15.96■□□□□ 0.15
SLC3A1-208ENST00000410056 AKT1S1Q96B36 256 aa15.95■□□□□ 0.14
SLC3A1-208ENST00000410056 ABCA10Q8WWZ4 1543 aa15.94■□□□□ 0.14
SLC3A1-208ENST00000410056 ABCA5Q8WWZ7 1642 aa15.94■□□□□ 0.14
SLC3A1-208ENST00000410056 GRIN2AQ12879 1464 aa15.9■□□□□ 0.14
SLC3A1-208ENST00000410056 NUP160Q12769 1436 aa15.9■□□□□ 0.14
SLC3A1-208ENST00000410056 CEP170Q5SW79 1584 aa15.9■□□□□ 0.14
SLC3A1-208ENST00000410056 POTEHQ6S545 545 aa15.88■□□□□ 0.13
SLC3A1-208ENST00000410056 SHROOM2Q13796 1616 aa15.85■□□□□ 0.13
SLC3A1-208ENST00000410056 KIF13AQ9H1H9 1805 aa15.83■□□□□ 0.13
SLC3A1-208ENST00000410056 ADAMTS12P58397 1594 aa15.83■□□□□ 0.12
SLC3A1-208ENST00000410056 SPDYE2BA6NHP3 402 aa15.81■□□□□ 0.12
SLC3A1-208ENST00000410056 SPDYE6P0CI01 402 aa15.81■□□□□ 0.12
SLC3A1-208ENST00000410056 SPDYE2Q495Y8 402 aa15.81■□□□□ 0.12
SLC3A1-208ENST00000410056 FHAD1B1AJZ9 1412 aa15.79■□□□□ 0.12
SLC3A1-208ENST00000410056 MKRN4PQ13434 485 aaPredicted RBP15.78■□□□□ 0.12
SLC3A1-208ENST00000410056 WRNQ14191 1432 aaPredicted RBP eCLIP15.78■□□□□ 0.12
SLC3A1-208ENST00000410056 CHRDL2Q6WN34 429 aa15.77■□□□□ 0.11
SLC3A1-208ENST00000410056 PRG4Q92954 1404 aaPredicted RBP15.75■□□□□ 0.11
SLC3A1-208ENST00000410056 ABCC10Q5T3U5 1492 aa15.74■□□□□ 0.11
SLC3A1-208ENST00000410056 REM2Q8IYK8 340 aaPredicted RBP15.74■□□□□ 0.11
SLC3A1-208ENST00000410056 FAM69CQ0P6D2 419 aa15.72■□□□□ 0.11
SLC3A1-208ENST00000410056 JPH4Q96JJ6 628 aa15.72■□□□□ 0.11
SLC3A1-208ENST00000410056 ERICH3Q5RHP9 1530 aa15.72■□□□□ 0.11
SLC3A1-208ENST00000410056 KDM4FA0A1W2PPD8 638 aa15.71■□□□□ 0.11
SLC3A1-208ENST00000410056 MAPKBP1O60336 1514 aa15.69■□□□□ 0.1
SLC3A1-208ENST00000410056 TOP2BQ02880 1626 aa15.68■□□□□ 0.1
SLC3A1-208ENST00000410056 BIVM-ERCC5R4GMW8 1640 aa15.68■□□□□ 0.1
SLC3A1-208ENST00000410056 DIP2BQ9P265 1576 aa15.66■□□□□ 0.1
SLC3A1-208ENST00000410056 NPM1P06748 294 aaKnown RBP eCLIP15.63■□□□□ 0.09
SLC3A1-208ENST00000410056 ILDR1Q86SU0 546 aaPredicted RBP15.62■□□□□ 0.09
SLC3A1-208ENST00000410056 ADCY10Q96PN6 1610 aa15.62■□□□□ 0.09
SLC3A1-208ENST00000410056 RUSC2Q8N2Y8 1516 aa15.61■□□□□ 0.09
SLC3A1-208ENST00000410056 ZNF692Q9BU19 519 aaPredicted RBP15.6■□□□□ 0.09
SLC3A1-208ENST00000410056 SSUH2Q9Y2M2 353 aa15.6■□□□□ 0.09
SLC3A1-208ENST00000410056 KDM6BO15054 1643 aa15.59■□□□□ 0.09
SLC3A1-208ENST00000410056 PITPNM1O00562 1244 aa15.54■□□□□ 0.08
SLC3A1-208ENST00000410056 KIAA0586Q9BVV6 1533 aa15.52■□□□□ 0.08
SLC3A1-208ENST00000410056 TSPOAP1O95153 1857 aa15.51■□□□□ 0.07
SLC3A1-208ENST00000410056 SUPT5HO00267 1087 aaKnown RBP15.48■□□□□ 0.07
SLC3A1-208ENST00000410056 IGF1RP08069 1367 aa15.47■□□□□ 0.07
SLC3A1-208ENST00000410056 SPDYE1Q8NFV5 336 aaPredicted RBP15.46■□□□□ 0.07
SLC3A1-208ENST00000410056 PTPRGP23470 1445 aa15.44■□□□□ 0.06
SLC3A1-208ENST00000410056 PPRC1Q5VV67 1664 aaKnown RBP15.43■□□□□ 0.06
SLC3A1-208ENST00000410056 ADGRL1O94910 1474 aa15.43■□□□□ 0.06
SLC3A1-208ENST00000410056 GLI2P10070 1586 aa15.43■□□□□ 0.06
SLC3A1-208ENST00000410056 ABCC2Q92887 1545 aa15.43■□□□□ 0.06
SLC3A1-208ENST00000410056 PIP4P2Q8N4L2 257 aa15.42■□□□□ 0.06
SLC3A1-208ENST00000410056 COL17A1Q9UMD9 1497 aaPredicted RBP15.41■□□□□ 0.06
SLC3A1-208ENST00000410056 ASXL2Q76L83 1435 aa15.41■□□□□ 0.06
SLC3A1-208ENST00000410056 FXR2P51116 673 aaKnown RBP eCLIP15.41■□□□□ 0.06
SLC3A1-208ENST00000410056 PLB1Q6P1J6 1458 aa15.4■□□□□ 0.06
SLC3A1-208ENST00000410056 TNIKQ9UKE5 1360 aa15.38■□□□□ 0.05
SLC3A1-208ENST00000410056 UHRF1BP1LA0JNW5 1464 aa15.37■□□□□ 0.05
SLC3A1-208ENST00000410056 CUL7Q14999 1698 aa15.36■□□□□ 0.05
SLC3A1-208ENST00000410056 KIF27Q86VH2 1401 aa15.35■□□□□ 0.05
SLC3A1-208ENST00000410056 HECW2Q9P2P5 1572 aa15.35■□□□□ 0.05
SLC3A1-208ENST00000410056 CARMIL2Q6F5E8 1435 aa15.34■□□□□ 0.05
SLC3A1-208ENST00000410056 TTBK1Q5TCY1 1321 aaPredicted RBP15.33■□□□□ 0.04
SLC3A1-208ENST00000410056 EPRSP07814 1512 aaKnown RBP15.32■□□□□ 0.04
SLC3A1-208ENST00000410056 CLEC11AQ9Y240 323 aa15.32■□□□□ 0.04
SLC3A1-208ENST00000410056 CARMIL1Q5VZK9 1371 aa15.32■□□□□ 0.04
SLC3A1-208ENST00000410056 UACAQ9BZF9 1416 aa15.31■□□□□ 0.04
SLC3A1-208ENST00000410056 MAP3K4Q9Y6R4 1608 aa15.31■□□□□ 0.04
SLC3A1-208ENST00000410056 KDM5BQ9UGL1 1544 aa15.31■□□□□ 0.04
SLC3A1-208ENST00000410056 DISP1Q96F81 1524 aa15.29■□□□□ 0.04
SLC3A1-208ENST00000410056 IQGAP2Q13576 1575 aa15.28■□□□□ 0.04
SLC3A1-208ENST00000410056 TEX14Q8IWB6 1497 aa15.28■□□□□ 0.04
SLC3A1-208ENST00000410056 SPDYE4A6NLX3 237 aa15.22■□□□□ 0.03
SLC3A1-208ENST00000410056 ZCCHC11Q5TAX3 1644 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms