RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 HIRIP3Q9BW71 556 aaPredicted RBP18.16■□□□□ 0.5
ATG9A-203ENST00000409033 ERCC6Q03468 1493 aa18.16■□□□□ 0.5
ATG9A-203ENST00000409033 TOPBP1Q92547 1522 aa18.16■□□□□ 0.5
ATG9A-203ENST00000409033 CHMP7Q8WUX9 453 aaPredicted RBP18.15■□□□□ 0.5
ATG9A-203ENST00000409033 ZNF777Q9ULD5 760 aaPredicted RBP18.15■□□□□ 0.5
ATG9A-203ENST00000409033 CNGB1Q14028 1251 aaPredicted RBP18.12■□□□□ 0.49
ATG9A-203ENST00000409033 ERICH3Q5RHP9 1530 aa18.12■□□□□ 0.49
ATG9A-203ENST00000409033 SIN3AQ96ST3 1273 aa18.12■□□□□ 0.49
ATG9A-203ENST00000409033 RRP7BPQ9NSQ0 103 aa18.11■□□□□ 0.49
ATG9A-203ENST00000409033 AQRO60306 1485 aaKnown RBP eCLIP18.1■□□□□ 0.491e-7■■■■■ 36.4
ATG9A-203ENST00000409033 MIER1Q8N108 512 aa18.09■□□□□ 0.49
ATG9A-203ENST00000409033 FHAD1B1AJZ9 1412 aa18.06■□□□□ 0.48
ATG9A-203ENST00000409033 GAPVD1Q14C86 1478 aa18.06■□□□□ 0.48
ATG9A-203ENST00000409033 URB2Q14146 1524 aaKnown RBP18.02■□□□□ 0.48
ATG9A-203ENST00000409033 DNMBPQ6XZF7 1577 aa18.01■□□□□ 0.47
ATG9A-203ENST00000409033 POLR3GLQ9BT43 218 aa18.01■□□□□ 0.47
ATG9A-203ENST00000409033 RAB3GAP2Q9H2M9 1393 aa18■□□□□ 0.47
ATG9A-203ENST00000409033 PHLDB1Q86UU1 1377 aa18■□□□□ 0.47
ATG9A-203ENST00000409033 GTF3C3Q9Y5Q9 886 aa17.99■□□□□ 0.47
ATG9A-203ENST00000409033 SCAF1Q9H7N4 1312 aaKnown RBP17.97■□□□□ 0.47
ATG9A-203ENST00000409033 DHX57Q6P158 1386 aaKnown RBP17.96■□□□□ 0.47
ATG9A-203ENST00000409033 ZNF326Q5BKZ1 582 aaKnown RBP17.96■□□□□ 0.47
ATG9A-203ENST00000409033 ACIN1Q9UKV3 1341 aaKnown RBP17.95■□□□□ 0.46
ATG9A-203ENST00000409033 DDX10Q13206 875 aaKnown RBP17.93■□□□□ 0.46
ATG9A-203ENST00000409033 ABCA10Q8WWZ4 1543 aa17.92■□□□□ 0.46
ATG9A-203ENST00000409033 FMN1Q68DA7 1419 aa17.9■□□□□ 0.46
ATG9A-203ENST00000409033 MYT1LQ9UL68 1186 aa17.89■□□□□ 0.45
ATG9A-203ENST00000409033 LRRC9Q6ZRR7 1453 aa17.89■□□□□ 0.45
ATG9A-203ENST00000409033 CDK11AQ9UQ88 783 aaPredicted RBP17.88■□□□□ 0.45
ATG9A-203ENST00000409033 LAMC3Q9Y6N6 1575 aa17.88■□□□□ 0.45
ATG9A-203ENST00000409033 FOXD1Q16676 465 aa17.87■□□□□ 0.45
ATG9A-203ENST00000409033 TONSLQ96HA7 1378 aa17.87■□□□□ 0.45
ATG9A-203ENST00000409033 SETD5Q9C0A6 1442 aa17.87■□□□□ 0.45
ATG9A-203ENST00000409033 PCF11O94913 1555 aaKnown RBP17.83■□□□□ 0.44
ATG9A-203ENST00000409033 ZNF608Q9ULD9 1512 aaPredicted RBP17.83■□□□□ 0.44
ATG9A-203ENST00000409033 TIAM1Q13009 1591 aa17.81■□□□□ 0.44
ATG9A-203ENST00000409033 RRBP1Q9P2E9 1410 aaKnown RBP17.8■□□□□ 0.44
ATG9A-203ENST00000409033 KCNH8Q96L42 1107 aa17.8■□□□□ 0.44
ATG9A-203ENST00000409033 KIF21AQ7Z4S6 1674 aa17.79■□□□□ 0.44
ATG9A-203ENST00000409033 CFDP1Q9UEE9 299 aaPredicted RBP17.79■□□□□ 0.44
ATG9A-203ENST00000409033 MRC2Q9UBG0 1479 aa17.78■□□□□ 0.44
ATG9A-203ENST00000409033 PRDM2Q13029 1718 aa17.77■□□□□ 0.43
ATG9A-203ENST00000409033 ZNF644Q9H582 1327 aaPredicted RBP17.76■□□□□ 0.43
ATG9A-203ENST00000409033 CASKIN1Q8WXD9 1431 aa17.75■□□□□ 0.43
ATG9A-203ENST00000409033 JPH4Q96JJ6 628 aa17.75■□□□□ 0.43
ATG9A-203ENST00000409033 SLC4A1APQ9BWU0 796 aaKnown RBP17.73■□□□□ 0.43
ATG9A-203ENST00000409033 CLSPNQ9HAW4 1339 aa17.73■□□□□ 0.43
ATG9A-203ENST00000409033 PLEKHD1A6NEE1 506 aa17.73■□□□□ 0.43
ATG9A-203ENST00000409033 GRIN2BQ13224 1484 aa17.72■□□□□ 0.43
ATG9A-203ENST00000409033 FGD6Q6ZV73 1430 aa17.71■□□□□ 0.43
ATG9A-203ENST00000409033 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.71■□□□□ 0.43
ATG9A-203ENST00000409033 SNAPC4Q5SXM2 1469 aa17.7■□□□□ 0.42
ATG9A-203ENST00000409033 FYCO1Q9BQS8 1478 aa17.7■□□□□ 0.42
ATG9A-203ENST00000409033 NCOA2Q15596 1464 aa17.68■□□□□ 0.42
ATG9A-203ENST00000409033 BCANQ96GW7 911 aa17.68■□□□□ 0.42
ATG9A-203ENST00000409033 CDK13Q14004 1512 aaKnown RBP17.67■□□□□ 0.42
ATG9A-203ENST00000409033 CUL7Q14999 1698 aa17.66■□□□□ 0.42
ATG9A-203ENST00000409033 ANP32CO43423 234 aa17.66■□□□□ 0.42
ATG9A-203ENST00000409033 EFCAB5A4FU69 1503 aa17.65■□□□□ 0.42
ATG9A-203ENST00000409033 KDM2AQ9Y2K7 1162 aa17.64■□□□□ 0.41
ATG9A-203ENST00000409033 TSPY4P0CV99 314 aa17.62■□□□□ 0.41
ATG9A-203ENST00000409033 TSPY10P0CW01 314 aa17.62■□□□□ 0.41
ATG9A-203ENST00000409033 MYOM3Q5VTT5 1437 aa17.61■□□□□ 0.41
ATG9A-203ENST00000409033 CCDC18Q5T9S5 1454 aa17.61■□□□□ 0.41
ATG9A-203ENST00000409033 IFT140Q96RY7 1462 aa17.61■□□□□ 0.41
ATG9A-203ENST00000409033 SENP3-EIF4A1A0A087X0R7 540 aa17.6■□□□□ 0.41
ATG9A-203ENST00000409033 MPHOSPH9Q99550 1183 aa17.58■□□□□ 0.4
ATG9A-203ENST00000409033 PPP1R15AO75807 674 aaPredicted RBP17.57■□□□□ 0.4
ATG9A-203ENST00000409033 CARMIL2Q6F5E8 1435 aa17.57■□□□□ 0.4
ATG9A-203ENST00000409033 IQGAP2Q13576 1575 aa17.56■□□□□ 0.4
ATG9A-203ENST00000409033 HNRNPMP52272 730 aaKnown RBP eCLIP17.56■□□□□ 0.4
ATG9A-203ENST00000409033 CTTNBP2Q8WZ74 1663 aa17.55■□□□□ 0.4
ATG9A-203ENST00000409033 PRG4Q92954 1404 aaPredicted RBP17.54■□□□□ 0.4
ATG9A-203ENST00000409033 RGL3Q3MIN7 710 aa17.54■□□□□ 0.4
ATG9A-203ENST00000409033 ABCA5Q8WWZ7 1642 aa17.52■□□□□ 0.4
ATG9A-203ENST00000409033 PTPRKQ15262 1439 aa17.52■□□□□ 0.4
ATG9A-203ENST00000409033 EPRSP07814 1512 aaKnown RBP17.51■□□□□ 0.39
ATG9A-203ENST00000409033 PLB1Q6P1J6 1458 aa17.51■□□□□ 0.39
ATG9A-203ENST00000409033 NEFLP07196 543 aa17.5■□□□□ 0.39
ATG9A-203ENST00000409033 L3MBTL2Q969R5 705 aa17.5■□□□□ 0.39
ATG9A-203ENST00000409033 GRIN2AQ12879 1464 aa17.49■□□□□ 0.39
ATG9A-203ENST00000409033 PKD2Q13563 968 aa17.48■□□□□ 0.39
ATG9A-203ENST00000409033 SENP3Q9H4L4 574 aaPredicted RBP17.48■□□□□ 0.39
ATG9A-203ENST00000409033 EIF4G2P78344 907 aaKnown RBP eCLIP17.48■□□□□ 0.39
ATG9A-203ENST00000409033 TARBP1Q13395 1621 aaKnown RBP17.47■□□□□ 0.39
ATG9A-203ENST00000409033 HSPA5P11021 654 aaKnown RBP17.46■□□□□ 0.39
ATG9A-203ENST00000409033 MAP3K1Q13233 1512 aa17.46■□□□□ 0.39
ATG9A-203ENST00000409033 KIAA0586Q9BVV6 1533 aa17.46■□□□□ 0.39
ATG9A-203ENST00000409033 PTPRGP23470 1445 aa17.45■□□□□ 0.38
ATG9A-203ENST00000409033 FAM9BQ8IZU0 186 aa17.45■□□□□ 0.38
ATG9A-203ENST00000409033 THOC2Q8NI27 1593 aaKnown RBP17.45■□□□□ 0.38
ATG9A-203ENST00000409033 WDR97A6NE52 1622 aa17.44■□□□□ 0.38
ATG9A-203ENST00000409033 EHBP1L1Q8N3D4 1523 aa17.44■□□□□ 0.38
ATG9A-203ENST00000409033 HNRNPUQ00839 825 aaKnown RBP eCLIP17.43■□□□□ 0.38
ATG9A-203ENST00000409033 NAIPQ13075 1403 aa17.43■□□□□ 0.38
ATG9A-203ENST00000409033 ADAMTS12P58397 1594 aa17.43■□□□□ 0.38
ATG9A-203ENST00000409033 SUPT6HQ7KZ85 1726 aaKnown RBP17.42■□□□□ 0.38
ATG9A-203ENST00000409033 MAPKBP1O60336 1514 aa17.41■□□□□ 0.38
ATG9A-203ENST00000409033 HECW1Q76N89 1606 aa17.41■□□□□ 0.38
ATG9A-203ENST00000409033 PBRM1Q86U86 1689 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms