RNA–Protein interactions for RNA: ENST00000406936.7

COMMD6-205, Transcript of COMM domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD6, Length 1,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-205ENST00000406936 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
COMMD6-205ENST00000406936 GRIN2BQ13224 1484 aa15.66■□□□□ 0.1
COMMD6-205ENST00000406936 CUX1P39880 1505 aa15.65■□□□□ 0.1
COMMD6-205ENST00000406936 CHMP7Q8WUX9 453 aaPredicted RBP15.65■□□□□ 0.1
COMMD6-205ENST00000406936 GAPVD1Q14C86 1478 aa15.64■□□□□ 0.09
COMMD6-205ENST00000406936 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.58■□□□□ 0.09
COMMD6-205ENST00000406936 ERCC6L2Q5T890 1561 aa15.57■□□□□ 0.08
COMMD6-205ENST00000406936 ABCA5Q8WWZ7 1642 aa15.57■□□□□ 0.08
COMMD6-205ENST00000406936 KIF13AQ9H1H9 1805 aa15.53■□□□□ 0.08
COMMD6-205ENST00000406936 ABCA10Q8WWZ4 1543 aa15.51■□□□□ 0.07
COMMD6-205ENST00000406936 CEP170Q5SW79 1584 aa15.5■□□□□ 0.07
COMMD6-205ENST00000406936 SHROOM2Q13796 1616 aa15.49■□□□□ 0.07
COMMD6-205ENST00000406936 GRIN2AQ12879 1464 aa15.48■□□□□ 0.07
COMMD6-205ENST00000406936 ADAMTS12P58397 1594 aa15.46■□□□□ 0.07
COMMD6-205ENST00000406936 NUP160Q12769 1436 aa15.45■□□□□ 0.06
COMMD6-205ENST00000406936 DSG3P32926 999 aa15.34■□□□□ 0.05
COMMD6-205ENST00000406936 BIVM-ERCC5R4GMW8 1640 aa15.34■□□□□ 0.05
COMMD6-205ENST00000406936 FHAD1B1AJZ9 1412 aa15.33■□□□□ 0.04
COMMD6-205ENST00000406936 WRNQ14191 1432 aaPredicted RBP eCLIP15.32■□□□□ 0.04
COMMD6-205ENST00000406936 ERICH3Q5RHP9 1530 aa15.3■□□□□ 0.04
COMMD6-205ENST00000406936 TOP2BQ02880 1626 aa15.3■□□□□ 0.04
COMMD6-205ENST00000406936 PRG4Q92954 1404 aaPredicted RBP15.3■□□□□ 0.04
COMMD6-205ENST00000406936 ABCC10Q5T3U5 1492 aa15.29■□□□□ 0.04
COMMD6-205ENST00000406936 DIP2BQ9P265 1576 aa15.29■□□□□ 0.04
COMMD6-205ENST00000406936 MAPKBP1O60336 1514 aa15.28■□□□□ 0.04
COMMD6-205ENST00000406936 RUSC2Q8N2Y8 1516 aa15.26■□□□□ 0.03
COMMD6-205ENST00000406936 ADCY10Q96PN6 1610 aa15.26■□□□□ 0.03
COMMD6-205ENST00000406936 KDM6BO15054 1643 aa15.23■□□□□ 0.03
COMMD6-205ENST00000406936 CAPN15O75808 1086 aa15.23■□□□□ 0.03
COMMD6-205ENST00000406936 TSPOAP1O95153 1857 aa15.23■□□□□ 0.03
COMMD6-205ENST00000406936 KDM4FA0A1W2PPD8 638 aa15.22■□□□□ 0.03
COMMD6-205ENST00000406936 FAM69CQ0P6D2 419 aa15.22■□□□□ 0.03
COMMD6-205ENST00000406936 JPH4Q96JJ6 628 aa15.21■□□□□ 0.03
COMMD6-205ENST00000406936 ILDR1Q86SU0 546 aaPredicted RBP15.14■□□□□ 0.01
COMMD6-205ENST00000406936 NPM1P06748 294 aaKnown RBP eCLIP15.13■□□□□ 0.01
COMMD6-205ENST00000406936 PPRC1Q5VV67 1664 aaKnown RBP15.11■□□□□ 0.01
COMMD6-205ENST00000406936 KIAA0586Q9BVV6 1533 aa15.07■□□□□ 0
COMMD6-205ENST00000406936 NCBP3Q53F19 620 aaKnown RBP15.04■□□□□ -0
COMMD6-205ENST00000406936 SPINK5Q9NQ38 1064 aaPredicted RBP15.04■□□□□ -0
COMMD6-205ENST00000406936 ADGRL1O94910 1474 aa15.03■□□□□ -0
COMMD6-205ENST00000406936 GLI2P10070 1586 aa15.03■□□□□ -0
COMMD6-205ENST00000406936 CUL7Q14999 1698 aa15.03■□□□□ -0
COMMD6-205ENST00000406936 SUPT5HO00267 1087 aaKnown RBP15.01□□□□□ -0.01
COMMD6-205ENST00000406936 ABCC2Q92887 1545 aa15□□□□□ -0.01
COMMD6-205ENST00000406936 U3KPZ7 1027 aaPredicted RBP14.99□□□□□ -0.01
COMMD6-205ENST00000406936 PTPRGP23470 1445 aa14.98□□□□□ -0.01
COMMD6-205ENST00000406936 IGF1RP08069 1367 aa14.98□□□□□ -0.01
COMMD6-205ENST00000406936 HECW2Q9P2P5 1572 aa14.98□□□□□ -0.01
COMMD6-205ENST00000406936 ASXL2Q76L83 1435 aa14.97□□□□□ -0.01
COMMD6-205ENST00000406936 COL17A1Q9UMD9 1497 aaPredicted RBP14.97□□□□□ -0.01
COMMD6-205ENST00000406936 MAP3K4Q9Y6R4 1608 aa14.97□□□□□ -0.01
COMMD6-205ENST00000406936 PLB1Q6P1J6 1458 aa14.95□□□□□ -0.02
COMMD6-205ENST00000406936 UHRF1BP1LA0JNW5 1464 aa14.93□□□□□ -0.02
COMMD6-205ENST00000406936 TNIKQ9UKE5 1360 aa14.92□□□□□ -0.02
COMMD6-205ENST00000406936 RBM42Q9BTD8 480 aaKnown RBP14.92□□□□□ -0.02
COMMD6-205ENST00000406936 KIF27Q86VH2 1401 aa14.91□□□□□ -0.02
COMMD6-205ENST00000406936 IQGAP2Q13576 1575 aa14.9□□□□□ -0.02
COMMD6-205ENST00000406936 SP7Q8TDD2 431 aaPredicted RBP14.9□□□□□ -0.02
COMMD6-205ENST00000406936 EPRSP07814 1512 aaKnown RBP14.9□□□□□ -0.02
COMMD6-205ENST00000406936 CARMIL2Q6F5E8 1435 aa14.89□□□□□ -0.03
COMMD6-205ENST00000406936 APLP2Q06481 763 aa14.88□□□□□ -0.03
COMMD6-205ENST00000406936 ZCCHC11Q5TAX3 1644 aaKnown RBP14.88□□□□□ -0.03
COMMD6-205ENST00000406936 KDM5BQ9UGL1 1544 aa14.88□□□□□ -0.03
COMMD6-205ENST00000406936 TTBK1Q5TCY1 1321 aaPredicted RBP14.87□□□□□ -0.03
COMMD6-205ENST00000406936 DISP1Q96F81 1524 aa14.87□□□□□ -0.03
COMMD6-205ENST00000406936 UACAQ9BZF9 1416 aa14.87□□□□□ -0.03
COMMD6-205ENST00000406936 TEX14Q8IWB6 1497 aa14.85□□□□□ -0.03
COMMD6-205ENST00000406936 CARMIL1Q5VZK9 1371 aa14.85□□□□□ -0.03
COMMD6-205ENST00000406936 KCNA4P22459 653 aa14.84□□□□□ -0.03
COMMD6-205ENST00000406936 CHRDL2Q6WN34 429 aa14.83□□□□□ -0.04
COMMD6-205ENST00000406936 UGGT2Q9NYU1 1516 aa14.8□□□□□ -0.04
COMMD6-205ENST00000406936 KIAA0556O60303 1618 aa14.79□□□□□ -0.04
COMMD6-205ENST00000406936 ZNF219Q9P2Y4 722 aaPredicted RBP14.77□□□□□ -0.04
COMMD6-205ENST00000406936 WDR7Q9Y4E6 1490 aa14.77□□□□□ -0.04
COMMD6-205ENST00000406936 CFAP43Q8NDM7 1665 aa14.77□□□□□ -0.05
COMMD6-205ENST00000406936 KIF21BO75037 1637 aa14.76□□□□□ -0.05
COMMD6-205ENST00000406936 MAGI3Q5TCQ9 1506 aa14.74□□□□□ -0.05
COMMD6-205ENST00000406936 FBXO41Q8TF61 875 aa14.7□□□□□ -0.06
COMMD6-205ENST00000406936 CTTNBP2Q8WZ74 1663 aa14.69□□□□□ -0.06
COMMD6-205ENST00000406936 CD109Q6YHK3 1445 aa14.69□□□□□ -0.06
COMMD6-205ENST00000406936 ABCA8O94911 1581 aa14.69□□□□□ -0.06
COMMD6-205ENST00000406936 RAPGEF2Q9Y4G8 1499 aa14.68□□□□□ -0.06
COMMD6-205ENST00000406936 ADAMTSL3P82987 1691 aa14.67□□□□□ -0.06
COMMD6-205ENST00000406936 ABCB7O75027 752 aa14.66□□□□□ -0.06
COMMD6-205ENST00000406936 ARAP3Q8WWN8 1544 aa14.65□□□□□ -0.06
COMMD6-205ENST00000406936 PTPRMP28827 1452 aa14.62□□□□□ -0.07
COMMD6-205ENST00000406936 KCNH8Q96L42 1107 aa14.6□□□□□ -0.07
COMMD6-205ENST00000406936 BCORL1Q5H9F3 1711 aa14.59□□□□□ -0.07
COMMD6-205ENST00000406936 GOLGA3Q08378 1498 aa14.58□□□□□ -0.08
COMMD6-205ENST00000406936 ABCA9Q8IUA7 1624 aa14.58□□□□□ -0.08
COMMD6-205ENST00000406936 MADDQ8WXG6 1647 aa14.57□□□□□ -0.08
COMMD6-205ENST00000406936 PCF11O94913 1555 aaKnown RBP14.56□□□□□ -0.08
COMMD6-205ENST00000406936 FRMPD1Q5SYB0 1578 aa14.56□□□□□ -0.08
COMMD6-205ENST00000406936 LMTK3Q96Q04 1460 aa14.55□□□□□ -0.08
COMMD6-205ENST00000406936 NPM3O75607 178 aaKnown RBP14.55□□□□□ -0.08
COMMD6-205ENST00000406936 ATP10BO94823 1461 aa14.52□□□□□ -0.08
COMMD6-205ENST00000406936 RIMS1Q86UR5 1692 aaKnown RBP14.51□□□□□ -0.09
COMMD6-205ENST00000406936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.51□□□□□ -0.09
COMMD6-205ENST00000406936 HNRNPUL2Q1KMD3 747 aaKnown RBP14.51□□□□□ -0.09
COMMD6-205ENST00000406936 PHLDB1Q86UU1 1377 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms