RNA–Protein interactions for RNA: ENST00000406915.3

SYCE3-202, Transcript of synaptonemal complex central element protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYCE3, Length 448 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3-202ENST00000406915 PRG4Q92954 1404 aaPredicted RBP12.12□□□□□ -0.47
SYCE3-202ENST00000406915 MAPKBP1O60336 1514 aa12.12□□□□□ -0.47
SYCE3-202ENST00000406915 TOP2AP11388 1531 aaKnown RBP12.12□□□□□ -0.47
SYCE3-202ENST00000406915 PRDM2Q13029 1718 aa12.11□□□□□ -0.47
SYCE3-202ENST00000406915 WDR97A6NE52 1622 aa12.1□□□□□ -0.47
SYCE3-202ENST00000406915 FGD5Q6ZNL6 1462 aa12.08□□□□□ -0.47
SYCE3-202ENST00000406915 COL17A1Q9UMD9 1497 aaPredicted RBP12.08□□□□□ -0.48
SYCE3-202ENST00000406915 NUP160Q12769 1436 aa12.06□□□□□ -0.48
SYCE3-202ENST00000406915 GRIN2AQ12879 1464 aa12.06□□□□□ -0.48
SYCE3-202ENST00000406915 TOP2BQ02880 1626 aa12.04□□□□□ -0.48
SYCE3-202ENST00000406915 SPATA31D1Q6ZQQ2 1576 aa12.02□□□□□ -0.49
SYCE3-202ENST00000406915 HSPA2P54652 639 aa11.99□□□□□ -0.49
SYCE3-202ENST00000406915 PHF23Q9BUL5 403 aaPredicted RBP11.99□□□□□ -0.49
SYCE3-202ENST00000406915 SHROOM2Q13796 1616 aa11.99□□□□□ -0.49
SYCE3-202ENST00000406915 TTBK1Q5TCY1 1321 aaPredicted RBP11.98□□□□□ -0.49
SYCE3-202ENST00000406915 ADCY10Q96PN6 1610 aa11.94□□□□□ -0.5
SYCE3-202ENST00000406915 PBRM1Q86U86 1689 aa11.93□□□□□ -0.5
SYCE3-202ENST00000406915 PTPRMP28827 1452 aa11.92□□□□□ -0.5
SYCE3-202ENST00000406915 FHAD1B1AJZ9 1412 aa11.92□□□□□ -0.5
SYCE3-202ENST00000406915 ASXL2Q76L83 1435 aa11.9□□□□□ -0.5
SYCE3-202ENST00000406915 PLPPR3Q6T4P5 718 aa11.89□□□□□ -0.51
SYCE3-202ENST00000406915 CUX1P39880 1505 aa11.89□□□□□ -0.51
SYCE3-202ENST00000406915 PLB1Q6P1J6 1458 aa11.89□□□□□ -0.51
SYCE3-202ENST00000406915 TEX14Q8IWB6 1497 aa11.89□□□□□ -0.51
SYCE3-202ENST00000406915 PCF11O94913 1555 aaKnown RBP11.88□□□□□ -0.51
SYCE3-202ENST00000406915 ABCA10Q8WWZ4 1543 aa11.87□□□□□ -0.51
SYCE3-202ENST00000406915 PPRC1Q5VV67 1664 aaKnown RBP11.87□□□□□ -0.51
SYCE3-202ENST00000406915 GLI2P10070 1586 aa11.86□□□□□ -0.51
SYCE3-202ENST00000406915 PTPRGP23470 1445 aa11.86□□□□□ -0.51
SYCE3-202ENST00000406915 ARID4BQ4LE39 1312 aaPredicted RBP11.84□□□□□ -0.51
SYCE3-202ENST00000406915 ADAMTS12P58397 1594 aa11.83□□□□□ -0.52
SYCE3-202ENST00000406915 ABCA5Q8WWZ7 1642 aa11.82□□□□□ -0.52
SYCE3-202ENST00000406915 DMRT2Q9Y5R5 561 aa11.81□□□□□ -0.52
SYCE3-202ENST00000406915 EPRSP07814 1512 aaKnown RBP11.79□□□□□ -0.52
SYCE3-202ENST00000406915 ABCC2Q92887 1545 aa11.79□□□□□ -0.52
SYCE3-202ENST00000406915 KCNH8Q96L42 1107 aa11.75□□□□□ -0.53
SYCE3-202ENST00000406915 KIF21BO75037 1637 aa11.74□□□□□ -0.53
SYCE3-202ENST00000406915 WRNQ14191 1432 aaPredicted RBP eCLIP11.73□□□□□ -0.53
SYCE3-202ENST00000406915 CD109Q6YHK3 1445 aa11.71□□□□□ -0.53
SYCE3-202ENST00000406915 TNIKQ9UKE5 1360 aa11.71□□□□□ -0.53
SYCE3-202ENST00000406915 ADAMTSL3P82987 1691 aa11.71□□□□□ -0.54
SYCE3-202ENST00000406915 MAP3K4Q9Y6R4 1608 aa11.71□□□□□ -0.54
SYCE3-202ENST00000406915 UBAP1LF5GYI3 381 aa11.69□□□□□ -0.54
SYCE3-202ENST00000406915 KIAA0586Q9BVV6 1533 aa11.69□□□□□ -0.54
SYCE3-202ENST00000406915 ERICH3Q5RHP9 1530 aa11.68□□□□□ -0.54
SYCE3-202ENST00000406915 UACAQ9BZF9 1416 aa11.68□□□□□ -0.54
SYCE3-202ENST00000406915 YEATS2Q9ULM3 1422 aa11.68□□□□□ -0.54
SYCE3-202ENST00000406915 RAPGEF3O95398 923 aa11.67□□□□□ -0.54
SYCE3-202ENST00000406915 RUSC2Q8N2Y8 1516 aa11.65□□□□□ -0.54
SYCE3-202ENST00000406915 CARMIL2Q6F5E8 1435 aa11.65□□□□□ -0.54
SYCE3-202ENST00000406915 UHRF1BP1LA0JNW5 1464 aa11.64□□□□□ -0.55
SYCE3-202ENST00000406915 MAGI3Q5TCQ9 1506 aa11.64□□□□□ -0.55
SYCE3-202ENST00000406915 MADDQ8WXG6 1647 aa11.62□□□□□ -0.55
SYCE3-202ENST00000406915 MLECQ14165 292 aa11.61□□□□□ -0.55
SYCE3-202ENST00000406915 CUL7Q14999 1698 aa11.61□□□□□ -0.55
SYCE3-202ENST00000406915 KDM5BQ9UGL1 1544 aa11.6□□□□□ -0.55
SYCE3-202ENST00000406915 HSPA1LP34931 641 aa11.6□□□□□ -0.55
SYCE3-202ENST00000406915 SCAF1Q9H7N4 1312 aaKnown RBP11.59□□□□□ -0.55
SYCE3-202ENST00000406915 ARAP3Q8WWN8 1544 aa11.58□□□□□ -0.56
SYCE3-202ENST00000406915 BCORL1Q5H9F3 1711 aa11.57□□□□□ -0.56
SYCE3-202ENST00000406915 WDR7Q9Y4E6 1490 aa11.57□□□□□ -0.56
SYCE3-202ENST00000406915 FOXD1Q16676 465 aa11.57□□□□□ -0.56
SYCE3-202ENST00000406915 CEBPAP49715 358 aaPredicted RBP11.56□□□□□ -0.56
SYCE3-202ENST00000406915 IQSEC2Q5JU85 1478 aa11.55□□□□□ -0.56
SYCE3-202ENST00000406915 RIMS1Q86UR5 1692 aaKnown RBP11.55□□□□□ -0.56
SYCE3-202ENST00000406915 PTPRTO14522 1441 aa11.54□□□□□ -0.56
SYCE3-202ENST00000406915 PIP4K2BP78356 416 aa11.54□□□□□ -0.56
SYCE3-202ENST00000406915 MED1Q15648 1581 aaPredicted RBP11.54□□□□□ -0.56
SYCE3-202ENST00000406915 PHLDB1Q86UU1 1377 aa11.54□□□□□ -0.56
SYCE3-202ENST00000406915 POGZQ7Z3K3 1410 aa11.52□□□□□ -0.56
SYCE3-202ENST00000406915 LTBP4Q8N2S1 1624 aa11.51□□□□□ -0.57
SYCE3-202ENST00000406915 ZCCHC11Q5TAX3 1644 aaKnown RBP11.49□□□□□ -0.57
SYCE3-202ENST00000406915 IGF1RP08069 1367 aa11.48□□□□□ -0.57
SYCE3-202ENST00000406915 ZNF335Q9H4Z2 1342 aaPredicted RBP11.46□□□□□ -0.57
SYCE3-202ENST00000406915 TOM1O60784 492 aa11.46□□□□□ -0.57
SYCE3-202ENST00000406915 STRCQ7RTU9 1775 aa11.46□□□□□ -0.58
SYCE3-202ENST00000406915 CFAP43Q8NDM7 1665 aa11.46□□□□□ -0.58
SYCE3-202ENST00000406915 RGS17Q9UGC6 210 aaPredicted RBP11.45□□□□□ -0.58
SYCE3-202ENST00000406915 UHRF1BP1Q6BDS2 1440 aa11.44□□□□□ -0.58
SYCE3-202ENST00000406915 ARID3CA6NKF2 412 aa11.42□□□□□ -0.58
SYCE3-202ENST00000406915 FANCAO15360 1455 aa11.41□□□□□ -0.58
SYCE3-202ENST00000406915 AKNAQ7Z591 1439 aa11.4□□□□□ -0.58
SYCE3-202ENST00000406915 DISP1Q96F81 1524 aa11.4□□□□□ -0.59
SYCE3-202ENST00000406915 NCKAP5LQ9HCH0 1330 aa11.38□□□□□ -0.59
SYCE3-202ENST00000406915 CARMIL1Q5VZK9 1371 aa11.38□□□□□ -0.59
SYCE3-202ENST00000406915 NEO1Q92859 1461 aa11.37□□□□□ -0.59
SYCE3-202ENST00000406915 MSH5O43196 834 aa11.36□□□□□ -0.59
SYCE3-202ENST00000406915 POTEAQ6S8J7 498 aa11.36□□□□□ -0.59
SYCE3-202ENST00000406915 PREX1Q8TCU6 1659 aa11.35□□□□□ -0.59
SYCE3-202ENST00000406915 DENND4BO75064 1496 aaPredicted RBP11.34□□□□□ -0.59
SYCE3-202ENST00000406915 FAM9AQ8IZU1 332 aaPredicted RBP11.33□□□□□ -0.6
SYCE3-202ENST00000406915 BIVM-ERCC5R4GMW8 1640 aa11.32□□□□□ -0.6
SYCE3-202ENST00000406915 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.32□□□□□ -0.6
SYCE3-202ENST00000406915 HNRNPUL2Q1KMD3 747 aaKnown RBP11.32□□□□□ -0.6
SYCE3-202ENST00000406915 ESF1Q9H501 851 aaKnown RBP11.32□□□□□ -0.6
SYCE3-202ENST00000406915 IQGAP2Q13576 1575 aa11.32□□□□□ -0.6
SYCE3-202ENST00000406915 TTC37Q6PGP7 1564 aa11.32□□□□□ -0.6
SYCE3-202ENST00000406915 NCOA1Q15788 1441 aa11.31□□□□□ -0.6
SYCE3-202ENST00000406915 UPF1Q92900 1129 aaKnown RBP eCLIP11.3□□□□□ -0.6
SYCE3-202ENST00000406915 ARHGEF40Q8TER5 1519 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms