RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 RAB3GAP2Q9H2M9 1393 aa26.88■■□□□ 1.89
EWSR1-207ENST00000406548 FANCD2Q9BXW9 1451 aa26.88■■□□□ 1.89
EWSR1-207ENST00000406548 NESP48681 1621 aa26.87■■□□□ 1.89
EWSR1-207ENST00000406548 PCF11O94913 1555 aaKnown RBP26.85■■□□□ 1.89
EWSR1-207ENST00000406548 MAPKBP1O60336 1514 aa26.85■■□□□ 1.89
EWSR1-207ENST00000406548 DNMBPQ6XZF7 1577 aa26.84■■□□□ 1.89
EWSR1-207ENST00000406548 LAMC3Q9Y6N6 1575 aa26.83■■□□□ 1.89
EWSR1-207ENST00000406548 PHLDB1Q86UU1 1377 aa26.81■■□□□ 1.88
EWSR1-207ENST00000406548 ABCA10Q8WWZ4 1543 aa26.79■■□□□ 1.88
EWSR1-207ENST00000406548 SETD5Q9C0A6 1442 aa26.79■■□□□ 1.88
EWSR1-207ENST00000406548 EFCAB5A4FU69 1503 aa26.75■■□□□ 1.87
EWSR1-207ENST00000406548 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
EWSR1-207ENST00000406548 TOPBP1Q92547 1522 aa26.74■■□□□ 1.87
EWSR1-207ENST00000406548 CUL7Q14999 1698 aa26.73■■□□□ 1.87
EWSR1-207ENST00000406548 POLA1P09884 1462 aaPredicted RBP26.73■■□□□ 1.87
EWSR1-207ENST00000406548 FYCO1Q9BQS8 1478 aa26.73■■□□□ 1.87
EWSR1-207ENST00000406548 CTTNBP2Q8WZ74 1663 aa26.71■■□□□ 1.87
EWSR1-207ENST00000406548 FHOD3Q2V2M9 1422 aa26.7■■□□□ 1.87
EWSR1-207ENST00000406548 P3H3Q8IVL6 736 aa26.67■■□□□ 1.86
EWSR1-207ENST00000406548 AQRO60306 1485 aaKnown RBP eCLIP26.67■■□□□ 1.862e-7■■■□□ 18.8
EWSR1-207ENST00000406548 FAM50AQ14320 339 aaKnown RBP26.66■■□□□ 1.86
EWSR1-207ENST00000406548 CASKIN1Q8WXD9 1431 aa26.66■■□□□ 1.86
EWSR1-207ENST00000406548 PDS5BQ9NTI5 1447 aa26.63■■□□□ 1.85
EWSR1-207ENST00000406548 WDR97A6NE52 1622 aa26.6■■□□□ 1.85
EWSR1-207ENST00000406548 ATP1B4Q9UN42 357 aaPredicted RBP26.59■■□□□ 1.85
EWSR1-207ENST00000406548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.59■■□□□ 1.856e-6■□□□□ 11
EWSR1-207ENST00000406548 FMN1Q68DA7 1419 aa26.54■■□□□ 1.84
EWSR1-207ENST00000406548 URB2Q14146 1524 aaKnown RBP26.54■■□□□ 1.84
EWSR1-207ENST00000406548 SNAPC4Q5SXM2 1469 aa26.52■■□□□ 1.84
EWSR1-207ENST00000406548 SIN3AQ96ST3 1273 aa26.51■■□□□ 1.83
EWSR1-207ENST00000406548 ABCA5Q8WWZ7 1642 aa26.49■■□□□ 1.83
EWSR1-207ENST00000406548 TIMELESSQ9UNS1 1208 aa26.49■■□□□ 1.83
EWSR1-207ENST00000406548 SAMD9Q5K651 1589 aa26.48■■□□□ 1.83
EWSR1-207ENST00000406548 KIF21AQ7Z4S6 1674 aa26.48■■□□□ 1.83
EWSR1-207ENST00000406548 FGD6Q6ZV73 1430 aa26.48■■□□□ 1.83
EWSR1-207ENST00000406548 SUPT16HQ9Y5B9 1047 aaKnown RBP26.43■■□□□ 1.82
EWSR1-207ENST00000406548 LRRIQ1Q96JM4 1722 aa26.42■■□□□ 1.82
EWSR1-207ENST00000406548 MTUS2Q5JR59 1369 aa26.39■■□□□ 1.82
EWSR1-207ENST00000406548 THOC2Q8NI27 1593 aaKnown RBP26.38■■□□□ 1.81
EWSR1-207ENST00000406548 GAPVD1Q14C86 1478 aa26.37■■□□□ 1.81
EWSR1-207ENST00000406548 CCDC18Q5T9S5 1454 aa26.37■■□□□ 1.81
EWSR1-207ENST00000406548 GRIN2BQ13224 1484 aa26.36■■□□□ 1.81
EWSR1-207ENST00000406548 TDRD9Q8NDG6 1382 aaKnown RBP26.35■■□□□ 1.81
EWSR1-207ENST00000406548 PTPN23Q9H3S7 1636 aa26.34■■□□□ 1.81
EWSR1-207ENST00000406548 HFM1A2PYH4 1435 aa26.34■■□□□ 1.81
EWSR1-207ENST00000406548 KCNH8Q96L42 1107 aa26.34■■□□□ 1.81
EWSR1-207ENST00000406548 PPP1R15AO75807 674 aaPredicted RBP26.33■■□□□ 1.81
EWSR1-207ENST00000406548 DDX10Q13206 875 aaKnown RBP26.32■■□□□ 1.8
EWSR1-207ENST00000406548 SUPT6HQ7KZ85 1726 aaKnown RBP26.32■■□□□ 1.8
EWSR1-207ENST00000406548 NCOA2Q15596 1464 aa26.32■■□□□ 1.8
EWSR1-207ENST00000406548 PTPRKQ15262 1439 aa26.31■■□□□ 1.8
EWSR1-207ENST00000406548 EHBP1L1Q8N3D4 1523 aa26.31■■□□□ 1.8
EWSR1-207ENST00000406548 MYOM3Q5VTT5 1437 aa26.3■■□□□ 1.8
EWSR1-207ENST00000406548 UACAQ9BZF9 1416 aa26.3■■□□□ 1.8
EWSR1-207ENST00000406548 MYT1Q01538 1121 aa26.28■■□□□ 1.8
EWSR1-207ENST00000406548 MRC2Q9UBG0 1479 aa26.27■■□□□ 1.8
EWSR1-207ENST00000406548 TONSLQ96HA7 1378 aa26.24■■□□□ 1.79
EWSR1-207ENST00000406548 NAIPQ13075 1403 aa26.23■■□□□ 1.79
EWSR1-207ENST00000406548 UGGT2Q9NYU1 1516 aa26.22■■□□□ 1.79
EWSR1-207ENST00000406548 TARBP1Q13395 1621 aaKnown RBP26.21■■□□□ 1.79
EWSR1-207ENST00000406548 ARHGEF11O15085 1522 aa26.21■■□□□ 1.79
EWSR1-207ENST00000406548 MAGI3Q5TCQ9 1506 aa26.17■■□□□ 1.78
EWSR1-207ENST00000406548 HIRIP3Q9BW71 556 aaPredicted RBP26.16■■□□□ 1.78
EWSR1-207ENST00000406548 PBRM1Q86U86 1689 aa26.15■■□□□ 1.78
EWSR1-207ENST00000406548 HECW1Q76N89 1606 aa26.14■■□□□ 1.78
EWSR1-207ENST00000406548 CCER2I3L3R5 266 aa26.14■■□□□ 1.77
EWSR1-207ENST00000406548 WDR62O43379 1518 aa26.13■■□□□ 1.77
EWSR1-207ENST00000406548 GCC2Q8IWJ2 1684 aa26.12■■□□□ 1.77
EWSR1-207ENST00000406548 TCOF1Q13428 1488 aaKnown RBP26.12■■□□□ 1.77
EWSR1-207ENST00000406548 ANP32CO43423 234 aa26.1■■□□□ 1.77
EWSR1-207ENST00000406548 KDM5BQ9UGL1 1544 aa26.09■■□□□ 1.77
EWSR1-207ENST00000406548 IQGAP2Q13576 1575 aa26.08■■□□□ 1.77
EWSR1-207ENST00000406548 ADAMTS12P58397 1594 aa26.06■■□□□ 1.76
EWSR1-207ENST00000406548 ERCC6Q03468 1493 aa26.05■■□□□ 1.76
EWSR1-207ENST00000406548 AKNAQ7Z591 1439 aa26.04■■□□□ 1.76
EWSR1-207ENST00000406548 EPRSP07814 1512 aaKnown RBP26.03■■□□□ 1.76
EWSR1-207ENST00000406548 IFT140Q96RY7 1462 aa26■■□□□ 1.75
EWSR1-207ENST00000406548 TSHZ2Q9NRE2 1034 aa25.99■■□□□ 1.75
EWSR1-207ENST00000406548 RRP7BPQ9NSQ0 103 aa25.98■■□□□ 1.75
EWSR1-207ENST00000406548 MIA2Q96PC5 1412 aa25.97■■□□□ 1.75
EWSR1-207ENST00000406548 CDK13Q14004 1512 aaKnown RBP25.97■■□□□ 1.75
EWSR1-207ENST00000406548 DENND4BO75064 1496 aaPredicted RBP25.97■■□□□ 1.75
EWSR1-207ENST00000406548 KDM6BO15054 1643 aa25.95■■□□□ 1.74
EWSR1-207ENST00000406548 FKBP8Q14318 412 aa25.94■■□□□ 1.74
EWSR1-207ENST00000406548 CHIC2Q9UKJ5 165 aa25.94■■□□□ 1.74
EWSR1-207ENST00000406548 TRIM52Q96A61 297 aa25.91■■□□□ 1.74
EWSR1-207ENST00000406548 BCANQ96GW7 911 aa25.9■■□□□ 1.74
EWSR1-207ENST00000406548 ZNF608Q9ULD9 1512 aaPredicted RBP25.9■■□□□ 1.74
EWSR1-207ENST00000406548 NEFLP07196 543 aa25.86■■□□□ 1.73
EWSR1-207ENST00000406548 HSPA5P11021 654 aaKnown RBP25.82■■□□□ 1.72
EWSR1-207ENST00000406548 KIAA0556O60303 1618 aa25.81■■□□□ 1.72
EWSR1-207ENST00000406548 MPHOSPH9Q99550 1183 aa25.81■■□□□ 1.72
EWSR1-207ENST00000406548 WASHC2AQ641Q2 1341 aa25.8■■□□□ 1.72
EWSR1-207ENST00000406548 DNMT1P26358 1616 aaKnown RBP25.79■■□□□ 1.72
EWSR1-207ENST00000406548 DAPK1P53355 1430 aa25.79■■□□□ 1.72
EWSR1-207ENST00000406548 ROCK1Q13464 1354 aa25.78■■□□□ 1.72
EWSR1-207ENST00000406548 ARID3CA6NKF2 412 aa25.78■■□□□ 1.72
EWSR1-207ENST00000406548 EIF4G3O43432 1585 aaKnown RBP25.76■■□□□ 1.71
EWSR1-207ENST00000406548 DISP1Q96F81 1524 aa25.76■■□□□ 1.71
EWSR1-207ENST00000406548 KIAA0586Q9BVV6 1533 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms