RNA–Protein interactions for RNA: ENST00000405876.8

TCHP-202, Transcript of trichoplein keratin filament binding, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCHP, Length 3,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-202ENST00000405876 PRDM2Q13029 1718 aa17.32■□□□□ 0.36
TCHP-202ENST00000405876 TOPBP1Q92547 1522 aa17.32■□□□□ 0.36
TCHP-202ENST00000405876 FHOD3Q2V2M9 1422 aa17.3■□□□□ 0.36
TCHP-202ENST00000405876 FAM50AQ14320 339 aaKnown RBP17.3■□□□□ 0.36
TCHP-202ENST00000405876 RRBP1Q9P2E9 1410 aaKnown RBP17.29■□□□□ 0.36
TCHP-202ENST00000405876 DNMBPQ6XZF7 1577 aa17.25■□□□□ 0.35
TCHP-202ENST00000405876 PHLDB1Q86UU1 1377 aa17.25■□□□□ 0.35
TCHP-202ENST00000405876 URB2Q14146 1524 aaKnown RBP17.24■□□□□ 0.35
TCHP-202ENST00000405876 ABCA10Q8WWZ4 1543 aa17.23■□□□□ 0.35
TCHP-202ENST00000405876 LRRC9Q6ZRR7 1453 aa17.19■□□□□ 0.34
TCHP-202ENST00000405876 TIAM1Q13009 1591 aa17.19■□□□□ 0.34
TCHP-202ENST00000405876 RAB3GAP2Q9H2M9 1393 aa17.19■□□□□ 0.34
TCHP-202ENST00000405876 FHAD1B1AJZ9 1412 aa17.15■□□□□ 0.34
TCHP-202ENST00000405876 PCF11O94913 1555 aaKnown RBP17.15■□□□□ 0.34
TCHP-202ENST00000405876 ARID3CA6NKF2 412 aa17.13■□□□□ 0.33
TCHP-202ENST00000405876 SIN3AQ96ST3 1273 aa17.13■□□□□ 0.33
TCHP-202ENST00000405876 CLSPNQ9HAW4 1339 aa17.12■□□□□ 0.33
TCHP-202ENST00000405876 PDS5BQ9NTI5 1447 aa17.11■□□□□ 0.33
TCHP-202ENST00000405876 GAPVD1Q14C86 1478 aa17.1■□□□□ 0.33
TCHP-202ENST00000405876 LAMC3Q9Y6N6 1575 aa17.1■□□□□ 0.33
TCHP-202ENST00000405876 KCNH8Q96L42 1107 aa17.08■□□□□ 0.32
TCHP-202ENST00000405876 SETD5Q9C0A6 1442 aa17.06■□□□□ 0.32
TCHP-202ENST00000405876 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.322e-6■■■■■ 29.8
TCHP-202ENST00000405876 MAP3K1Q13233 1512 aa17.05■□□□□ 0.32
TCHP-202ENST00000405876 CASKIN1Q8WXD9 1431 aa17.04■□□□□ 0.32
TCHP-202ENST00000405876 MTUS2Q5JR59 1369 aa17.04■□□□□ 0.32
TCHP-202ENST00000405876 HIRIP3Q9BW71 556 aaPredicted RBP17.02■□□□□ 0.32
TCHP-202ENST00000405876 KIF21AQ7Z4S6 1674 aa17.01■□□□□ 0.31
TCHP-202ENST00000405876 MAPKBP1O60336 1514 aa17.01■□□□□ 0.31
TCHP-202ENST00000405876 FYCO1Q9BQS8 1478 aa17.01■□□□□ 0.31
TCHP-202ENST00000405876 CUL7Q14999 1698 aa17■□□□□ 0.31
TCHP-202ENST00000405876 FMN1Q68DA7 1419 aa17■□□□□ 0.31
TCHP-202ENST00000405876 EFCAB5A4FU69 1503 aa16.98■□□□□ 0.31
TCHP-202ENST00000405876 SNAPC4Q5SXM2 1469 aa16.97■□□□□ 0.31
TCHP-202ENST00000405876 ABCA5Q8WWZ7 1642 aa16.97■□□□□ 0.31
TCHP-202ENST00000405876 SUPT16HQ9Y5B9 1047 aaKnown RBP16.95■□□□□ 0.3
TCHP-202ENST00000405876 WDR97A6NE52 1622 aa16.95■□□□□ 0.3
TCHP-202ENST00000405876 CFAP43Q8NDM7 1665 aa16.95■□□□□ 0.3
TCHP-202ENST00000405876 CHIC2Q9UKJ5 165 aa16.95■□□□□ 0.3
TCHP-202ENST00000405876 CTTNBP2Q8WZ74 1663 aa16.94■□□□□ 0.3
TCHP-202ENST00000405876 PTPRKQ15262 1439 aa16.94■□□□□ 0.3
TCHP-202ENST00000405876 FGD6Q6ZV73 1430 aa16.94■□□□□ 0.3
TCHP-202ENST00000405876 DDX10Q13206 875 aaKnown RBP16.94■□□□□ 0.3
TCHP-202ENST00000405876 BCANQ96GW7 911 aa16.93■□□□□ 0.3
TCHP-202ENST00000405876 RRP7BPQ9NSQ0 103 aa16.9■□□□□ 0.3
TCHP-202ENST00000405876 ZNF608Q9ULD9 1512 aaPredicted RBP16.9■□□□□ 0.3
TCHP-202ENST00000405876 TARBP1Q13395 1621 aaKnown RBP16.9■□□□□ 0.3
TCHP-202ENST00000405876 NCOA2Q15596 1464 aa16.88■□□□□ 0.29
TCHP-202ENST00000405876 GRIN2BQ13224 1484 aa16.86■□□□□ 0.29
TCHP-202ENST00000405876 SAMD9Q5K651 1589 aa16.85■□□□□ 0.29
TCHP-202ENST00000405876 FBLN2P98095 1184 aa16.85■□□□□ 0.29
TCHP-202ENST00000405876 MAGI3Q5TCQ9 1506 aa16.84■□□□□ 0.29
TCHP-202ENST00000405876 MRC2Q9UBG0 1479 aa16.83■□□□□ 0.28
TCHP-202ENST00000405876 LRRIQ1Q96JM4 1722 aa16.83■□□□□ 0.28
TCHP-202ENST00000405876 MYOM3Q5VTT5 1437 aa16.82■□□□□ 0.28
TCHP-202ENST00000405876 CDK13Q14004 1512 aaKnown RBP16.81■□□□□ 0.28
TCHP-202ENST00000405876 PPP1R15AO75807 674 aaPredicted RBP16.81■□□□□ 0.28
TCHP-202ENST00000405876 CCDC18Q5T9S5 1454 aa16.8■□□□□ 0.28
TCHP-202ENST00000405876 TRIM52Q96A61 297 aa16.79■□□□□ 0.28
TCHP-202ENST00000405876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.79■□□□□ 0.28
TCHP-202ENST00000405876 NAIPQ13075 1403 aa16.78■□□□□ 0.28
TCHP-202ENST00000405876 FOXD1Q16676 465 aa16.77■□□□□ 0.27
TCHP-202ENST00000405876 HFM1A2PYH4 1435 aa16.76■□□□□ 0.27
TCHP-202ENST00000405876 IQGAP2Q13576 1575 aa16.76■□□□□ 0.27
TCHP-202ENST00000405876 ZNF644Q9H582 1327 aaPredicted RBP16.76■□□□□ 0.27
TCHP-202ENST00000405876 TONSLQ96HA7 1378 aa16.75■□□□□ 0.27
TCHP-202ENST00000405876 EPRSP07814 1512 aaKnown RBP16.74■□□□□ 0.27
TCHP-202ENST00000405876 ADAMTS12P58397 1594 aa16.74■□□□□ 0.27
TCHP-202ENST00000405876 PBRM1Q86U86 1689 aa16.74■□□□□ 0.27
TCHP-202ENST00000405876 FKBP8Q14318 412 aa16.74■□□□□ 0.27
TCHP-202ENST00000405876 CHMP7Q8WUX9 453 aaPredicted RBP16.73■□□□□ 0.27
TCHP-202ENST00000405876 ERCC6Q03468 1493 aa16.72■□□□□ 0.27
TCHP-202ENST00000405876 EHBP1L1Q8N3D4 1523 aa16.72■□□□□ 0.27
TCHP-202ENST00000405876 TSHZ2Q9NRE2 1034 aa16.71■□□□□ 0.27
TCHP-202ENST00000405876 UACAQ9BZF9 1416 aa16.71■□□□□ 0.27
TCHP-202ENST00000405876 UGGT2Q9NYU1 1516 aa16.71■□□□□ 0.27
TCHP-202ENST00000405876 PTPN23Q9H3S7 1636 aa16.7■□□□□ 0.26
TCHP-202ENST00000405876 SUPT6HQ7KZ85 1726 aaKnown RBP16.7■□□□□ 0.26
TCHP-202ENST00000405876 IFT140Q96RY7 1462 aa16.69■□□□□ 0.26
TCHP-202ENST00000405876 THOC2Q8NI27 1593 aaKnown RBP16.69■□□□□ 0.26
TCHP-202ENST00000405876 TIMELESSQ9UNS1 1208 aa16.67■□□□□ 0.26
TCHP-202ENST00000405876 ZNF777Q9ULD5 760 aaPredicted RBP16.66■□□□□ 0.26
TCHP-202ENST00000405876 DISP1Q96F81 1524 aa16.65■□□□□ 0.26
TCHP-202ENST00000405876 ARHGEF11O15085 1522 aa16.65■□□□□ 0.26
TCHP-202ENST00000405876 HECW1Q76N89 1606 aa16.64■□□□□ 0.25
TCHP-202ENST00000405876 WDR62O43379 1518 aa16.64■□□□□ 0.25
TCHP-202ENST00000405876 KIAA0586Q9BVV6 1533 aa16.64■□□□□ 0.25
TCHP-202ENST00000405876 GRIN2AQ12879 1464 aa16.63■□□□□ 0.25
TCHP-202ENST00000405876 KDM6BO15054 1643 aa16.63■□□□□ 0.25
TCHP-202ENST00000405876 MPHOSPH9Q99550 1183 aa16.63■□□□□ 0.25
TCHP-202ENST00000405876 ANP32CO43423 234 aa16.61■□□□□ 0.25
TCHP-202ENST00000405876 PRG4Q92954 1404 aaPredicted RBP16.61■□□□□ 0.25
TCHP-202ENST00000405876 NUP153P49790 1475 aaKnown RBP16.61■□□□□ 0.25
TCHP-202ENST00000405876 PLB1Q6P1J6 1458 aa16.6■□□□□ 0.25
TCHP-202ENST00000405876 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
TCHP-202ENST00000405876 DENND4BO75064 1496 aaPredicted RBP16.6■□□□□ 0.25
TCHP-202ENST00000405876 JPH4Q96JJ6 628 aa16.6■□□□□ 0.25
TCHP-202ENST00000405876 BCL11AQ9H165 835 aa16.58■□□□□ 0.24
TCHP-202ENST00000405876 TCOF1Q13428 1488 aaKnown RBP16.57■□□□□ 0.24
TCHP-202ENST00000405876 L3MBTL2Q969R5 705 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms