RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 PHLDB1Q86UU1 1377 aa17.24■□□□□ 0.35
ITSN1-211ENST00000399355 CCNB3Q8WWL7 1395 aa17.22■□□□□ 0.35
ITSN1-211ENST00000399355 RAB3GAP2Q9H2M9 1393 aa17.2■□□□□ 0.34
ITSN1-211ENST00000399355 FANCD2Q9BXW9 1451 aa17.19■□□□□ 0.34
ITSN1-211ENST00000399355 ERICH3Q5RHP9 1530 aa17.16■□□□□ 0.34
ITSN1-211ENST00000399355 CHIC2Q9UKJ5 165 aa17.15■□□□□ 0.34
ITSN1-211ENST00000399355 DDX10Q13206 875 aaKnown RBP17.13■□□□□ 0.33
ITSN1-211ENST00000399355 POLA1P09884 1462 aaPredicted RBP17.09■□□□□ 0.33
ITSN1-211ENST00000399355 CNGB1Q14028 1251 aaPredicted RBP17.09■□□□□ 0.33
ITSN1-211ENST00000399355 BCANQ96GW7 911 aa17.08■□□□□ 0.32
ITSN1-211ENST00000399355 RRBP1Q9P2E9 1410 aaKnown RBP17.07■□□□□ 0.32
ITSN1-211ENST00000399355 FOXD1Q16676 465 aa17.06■□□□□ 0.32
ITSN1-211ENST00000399355 RRP7BPQ9NSQ0 103 aa17.05■□□□□ 0.32
ITSN1-211ENST00000399355 PCF11O94913 1555 aaKnown RBP17.05■□□□□ 0.32
ITSN1-211ENST00000399355 SENP3-EIF4A1A0A087X0R7 540 aa17.03■□□□□ 0.32
ITSN1-211ENST00000399355 TOPBP1Q92547 1522 aa17.03■□□□□ 0.32
ITSN1-211ENST00000399355 LRRC9Q6ZRR7 1453 aa17.02■□□□□ 0.31
ITSN1-211ENST00000399355 TIAM1Q13009 1591 aa17■□□□□ 0.31
ITSN1-211ENST00000399355 MAPKBP1O60336 1514 aa17■□□□□ 0.31
ITSN1-211ENST00000399355 URB2Q14146 1524 aaKnown RBP16.99■□□□□ 0.31
ITSN1-211ENST00000399355 TRIM52Q96A61 297 aa16.98■□□□□ 0.31
ITSN1-211ENST00000399355 WDR97A6NE52 1622 aa16.97■□□□□ 0.31
ITSN1-211ENST00000399355 PTPRKQ15262 1439 aa16.95■□□□□ 0.3
ITSN1-211ENST00000399355 AQRO60306 1485 aaKnown RBP eCLIP16.95■□□□□ 0.3
ITSN1-211ENST00000399355 FBLN2P98095 1184 aa16.94■□□□□ 0.3
ITSN1-211ENST00000399355 SETD5Q9C0A6 1442 aa16.93■□□□□ 0.3
ITSN1-211ENST00000399355 MTUS2Q5JR59 1369 aa16.92■□□□□ 0.3
ITSN1-211ENST00000399355 ZNF644Q9H582 1327 aaPredicted RBP16.88■□□□□ 0.29
ITSN1-211ENST00000399355 PDS5BQ9NTI5 1447 aa16.86■□□□□ 0.29
ITSN1-211ENST00000399355 PRDM2Q13029 1718 aa16.86■□□□□ 0.29
ITSN1-211ENST00000399355 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
ITSN1-211ENST00000399355 ABCA10Q8WWZ4 1543 aa16.84■□□□□ 0.29
ITSN1-211ENST00000399355 SUPT16HQ9Y5B9 1047 aaKnown RBP16.84■□□□□ 0.29
ITSN1-211ENST00000399355 GAPVD1Q14C86 1478 aa16.83■□□□□ 0.28
ITSN1-211ENST00000399355 FHAD1B1AJZ9 1412 aa16.81■□□□□ 0.28
ITSN1-211ENST00000399355 IRX6P78412 446 aaPredicted RBP16.81■□□□□ 0.28
ITSN1-211ENST00000399355 KIF21AQ7Z4S6 1674 aa16.81■□□□□ 0.28
ITSN1-211ENST00000399355 LRRIQ1Q96JM4 1722 aa16.81■□□□□ 0.28
ITSN1-211ENST00000399355 ZNF777Q9ULD5 760 aaPredicted RBP16.79■□□□□ 0.28
ITSN1-211ENST00000399355 ZNF608Q9ULD9 1512 aaPredicted RBP16.79■□□□□ 0.28
ITSN1-211ENST00000399355 CDK13Q14004 1512 aaKnown RBP16.78■□□□□ 0.28
ITSN1-211ENST00000399355 MAGI3Q5TCQ9 1506 aa16.78■□□□□ 0.28
ITSN1-211ENST00000399355 FGD6Q6ZV73 1430 aa16.78■□□□□ 0.28
ITSN1-211ENST00000399355 PPP1R15AO75807 674 aaPredicted RBP16.77■□□□□ 0.28
ITSN1-211ENST00000399355 CLSPNQ9HAW4 1339 aa16.76■□□□□ 0.27
ITSN1-211ENST00000399355 SNAPC4Q5SXM2 1469 aa16.75■□□□□ 0.27
ITSN1-211ENST00000399355 POLR3GLQ9BT43 218 aa16.75■□□□□ 0.27
ITSN1-211ENST00000399355 CASKIN1Q8WXD9 1431 aa16.74■□□□□ 0.27
ITSN1-211ENST00000399355 ZNF326Q5BKZ1 582 aaKnown RBP16.74■□□□□ 0.27
ITSN1-211ENST00000399355 NCOA2Q15596 1464 aa16.74■□□□□ 0.27
ITSN1-211ENST00000399355 TONSLQ96HA7 1378 aa16.73■□□□□ 0.27
ITSN1-211ENST00000399355 CCDC184Q52MB2 194 aa16.73■□□□□ 0.27
ITSN1-211ENST00000399355 CCDC18Q5T9S5 1454 aa16.72■□□□□ 0.27
ITSN1-211ENST00000399355 FKBP8Q14318 412 aa16.72■□□□□ 0.27
ITSN1-211ENST00000399355 KDM6BO15054 1643 aa16.71■□□□□ 0.27
ITSN1-211ENST00000399355 FYCO1Q9BQS8 1478 aa16.69■□□□□ 0.26
ITSN1-211ENST00000399355 CFAP43Q8NDM7 1665 aa16.69■□□□□ 0.26
ITSN1-211ENST00000399355 C11orf95C9JLR9 678 aaPredicted RBP16.69■□□□□ 0.26
ITSN1-211ENST00000399355 CTTNBP2Q8WZ74 1663 aa16.68■□□□□ 0.26
ITSN1-211ENST00000399355 NAIPQ13075 1403 aa16.67■□□□□ 0.26
ITSN1-211ENST00000399355 FMN1Q68DA7 1419 aa16.67■□□□□ 0.26
ITSN1-211ENST00000399355 LAMC3Q9Y6N6 1575 aa16.65■□□□□ 0.26
ITSN1-211ENST00000399355 L3MBTL2Q969R5 705 aa16.62■□□□□ 0.25
ITSN1-211ENST00000399355 HSPA5P11021 654 aaKnown RBP16.62■□□□□ 0.25
ITSN1-211ENST00000399355 ABCA5Q8WWZ7 1642 aa16.62■□□□□ 0.25
ITSN1-211ENST00000399355 MYOM3Q5VTT5 1437 aa16.62■□□□□ 0.25
ITSN1-211ENST00000399355 THOC2Q8NI27 1593 aaKnown RBP16.61■□□□□ 0.25
ITSN1-211ENST00000399355 PELP1Q8IZL8 1130 aaKnown RBP16.61■□□□□ 0.25
ITSN1-211ENST00000399355 GRIN2BQ13224 1484 aa16.6■□□□□ 0.25
ITSN1-211ENST00000399355 ANP32CO43423 234 aa16.59■□□□□ 0.25
ITSN1-211ENST00000399355 MPHOSPH9Q99550 1183 aa16.59■□□□□ 0.25
ITSN1-211ENST00000399355 DENND4BO75064 1496 aaPredicted RBP16.59■□□□□ 0.25
ITSN1-211ENST00000399355 NBPF8Q3BBV2 869 aa16.59■□□□□ 0.25
ITSN1-211ENST00000399355 WASHC2AQ641Q2 1341 aa16.58■□□□□ 0.25
ITSN1-211ENST00000399355 CUL7Q14999 1698 aa16.58■□□□□ 0.24
ITSN1-211ENST00000399355 MAP3K1Q13233 1512 aa16.58■□□□□ 0.24
ITSN1-211ENST00000399355 PTPN23Q9H3S7 1636 aa16.57■□□□□ 0.24
ITSN1-211ENST00000399355 HNRNPUQ00839 825 aaKnown RBP eCLIP16.57■□□□□ 0.24
ITSN1-211ENST00000399355 TARBP1Q13395 1621 aaKnown RBP16.57■□□□□ 0.24
ITSN1-211ENST00000399355 CHMP7Q8WUX9 453 aaPredicted RBP16.56■□□□□ 0.24
ITSN1-211ENST00000399355 FAM9BQ8IZU0 186 aa16.56■□□□□ 0.24
ITSN1-211ENST00000399355 EFCAB5A4FU69 1503 aa16.56■□□□□ 0.24
ITSN1-211ENST00000399355 HFM1A2PYH4 1435 aa16.55■□□□□ 0.24
ITSN1-211ENST00000399355 PRG4Q92954 1404 aaPredicted RBP16.55■□□□□ 0.24
ITSN1-211ENST00000399355 SLC4A1APQ9BWU0 796 aaKnown RBP16.54■□□□□ 0.24
ITSN1-211ENST00000399355 TSHZ2Q9NRE2 1034 aa16.54■□□□□ 0.24
ITSN1-211ENST00000399355 EPRSP07814 1512 aaKnown RBP16.54■□□□□ 0.24
ITSN1-211ENST00000399355 SAMD9Q5K651 1589 aa16.53■□□□□ 0.24
ITSN1-211ENST00000399355 PLB1Q6P1J6 1458 aa16.52■□□□□ 0.24
ITSN1-211ENST00000399355 UACAQ9BZF9 1416 aa16.52■□□□□ 0.24
ITSN1-211ENST00000399355 KDM2AQ9Y2K7 1162 aa16.51■□□□□ 0.23
ITSN1-211ENST00000399355 IQGAP2Q13576 1575 aa16.47■□□□□ 0.23
ITSN1-211ENST00000399355 CFDP1Q9UEE9 299 aaPredicted RBP16.47■□□□□ 0.23
ITSN1-211ENST00000399355 SUPT6HQ7KZ85 1726 aaKnown RBP16.47■□□□□ 0.23
ITSN1-211ENST00000399355 PBRM1Q86U86 1689 aa16.47■□□□□ 0.23
ITSN1-211ENST00000399355 UGGT2Q9NYU1 1516 aa16.47■□□□□ 0.23
ITSN1-211ENST00000399355 KDM5BQ9UGL1 1544 aa16.47■□□□□ 0.23
ITSN1-211ENST00000399355 ERCC6Q03468 1493 aa16.46■□□□□ 0.23
ITSN1-211ENST00000399355 HNRNPMP52272 730 aaKnown RBP eCLIP16.43■□□□□ 0.22
ITSN1-211ENST00000399355 SALL2Q9Y467 1007 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms