RNA–Protein interactions for RNA: ENST00000398944.7

EIF3CL-202, Transcript of eukaryotic translation initiation factor 3 subunit C like, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3CL, Length 3,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3CL-202ENST00000398944 CCDC136Q96JN2 1154 aa15.75■□□□□ 0.11
EIF3CL-202ENST00000398944 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
EIF3CL-202ENST00000398944 RRBP1Q9P2E9 1410 aaKnown RBP15.7■□□□□ 0.1
EIF3CL-202ENST00000398944 RAD54L2Q9Y4B4 1467 aa15.68■□□□□ 0.1
EIF3CL-202ENST00000398944 SIN3AQ96ST3 1273 aa15.66■□□□□ 0.1
EIF3CL-202ENST00000398944 RAB3GAP2Q9H2M9 1393 aa15.66■□□□□ 0.1
EIF3CL-202ENST00000398944 RBM19Q9Y4C8 960 aaKnown RBP15.66■□□□□ 0.1
EIF3CL-202ENST00000398944 CLSPNQ9HAW4 1339 aa15.66■□□□□ 0.1
EIF3CL-202ENST00000398944 ERICH6Q7L0X2 663 aa15.65■□□□□ 0.1
EIF3CL-202ENST00000398944 NESP48681 1621 aa15.64■□□□□ 0.09
EIF3CL-202ENST00000398944 FANCD2Q9BXW9 1451 aa15.64■□□□□ 0.09
EIF3CL-202ENST00000398944 PHLDB1Q86UU1 1377 aa15.63■□□□□ 0.09
EIF3CL-202ENST00000398944 FKBP8Q14318 412 aa15.63■□□□□ 0.09
EIF3CL-202ENST00000398944 FHOD3Q2V2M9 1422 aa15.62■□□□□ 0.09
EIF3CL-202ENST00000398944 CC2D2AQ9P2K1 1620 aa15.62■□□□□ 0.09
EIF3CL-202ENST00000398944 HIRIP3Q9BW71 556 aaPredicted RBP15.62■□□□□ 0.09
EIF3CL-202ENST00000398944 MSH5O43196 834 aa15.61■□□□□ 0.09
EIF3CL-202ENST00000398944 DNAJC5BQ9UF47 199 aa15.61■□□□□ 0.09
EIF3CL-202ENST00000398944 KCNH8Q96L42 1107 aa15.6■□□□□ 0.09
EIF3CL-202ENST00000398944 SALL2Q9Y467 1007 aaPredicted RBP15.59■□□□□ 0.09
EIF3CL-202ENST00000398944 LRRC9Q6ZRR7 1453 aa15.57■□□□□ 0.08
EIF3CL-202ENST00000398944 RTN4Q9NQC3 1192 aaKnown RBP15.56■□□□□ 0.08
EIF3CL-202ENST00000398944 TIAM1Q13009 1591 aa15.56■□□□□ 0.08
EIF3CL-202ENST00000398944 TDRD9Q8NDG6 1382 aaKnown RBP15.56■□□□□ 0.08
EIF3CL-202ENST00000398944 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.55■□□□□ 0.08
EIF3CL-202ENST00000398944 SETD5Q9C0A6 1442 aa15.55■□□□□ 0.08
EIF3CL-202ENST00000398944 DDX10Q13206 875 aaKnown RBP15.54■□□□□ 0.08
EIF3CL-202ENST00000398944 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.08
EIF3CL-202ENST00000398944 ARID3CA6NKF2 412 aa15.52■□□□□ 0.07
EIF3CL-202ENST00000398944 FHAD1B1AJZ9 1412 aa15.51■□□□□ 0.07
EIF3CL-202ENST00000398944 TOPBP1Q92547 1522 aa15.5■□□□□ 0.07
EIF3CL-202ENST00000398944 DEKP35659 375 aaKnown RBP15.49■□□□□ 0.07
EIF3CL-202ENST00000398944 PCF11O94913 1555 aaKnown RBP15.48■□□□□ 0.07
EIF3CL-202ENST00000398944 PRDM2Q13029 1718 aa15.48■□□□□ 0.07
EIF3CL-202ENST00000398944 MAPKBP1O60336 1514 aa15.48■□□□□ 0.07
EIF3CL-202ENST00000398944 NBR1Q14596 966 aa15.47■□□□□ 0.07
EIF3CL-202ENST00000398944 MTUS2Q5JR59 1369 aa15.44■□□□□ 0.06
EIF3CL-202ENST00000398944 DNMBPQ6XZF7 1577 aa15.43■□□□□ 0.06
EIF3CL-202ENST00000398944 ABCA10Q8WWZ4 1543 aa15.43■□□□□ 0.06
EIF3CL-202ENST00000398944 CHIC2Q9UKJ5 165 aa15.42■□□□□ 0.06
EIF3CL-202ENST00000398944 MAP3K1Q13233 1512 aa15.41■□□□□ 0.06
EIF3CL-202ENST00000398944 WDR97A6NE52 1622 aa15.4■□□□□ 0.06
EIF3CL-202ENST00000398944 IRX6P78412 446 aaPredicted RBP15.4■□□□□ 0.06
EIF3CL-202ENST00000398944 URB2Q14146 1524 aaKnown RBP15.39■□□□□ 0.05
EIF3CL-202ENST00000398944 CASKIN1Q8WXD9 1431 aa15.38■□□□□ 0.05
EIF3CL-202ENST00000398944 RRP7BPQ9NSQ0 103 aa15.38■□□□□ 0.05
EIF3CL-202ENST00000398944 PPP1R15AO75807 674 aaPredicted RBP15.37■□□□□ 0.05
EIF3CL-202ENST00000398944 FYCO1Q9BQS8 1478 aa15.35■□□□□ 0.05
EIF3CL-202ENST00000398944 TRIM52Q96A61 297 aa15.35■□□□□ 0.05
EIF3CL-202ENST00000398944 FMN1Q68DA7 1419 aa15.34■□□□□ 0.05
EIF3CL-202ENST00000398944 FGD6Q6ZV73 1430 aa15.34■□□□□ 0.05
EIF3CL-202ENST00000398944 PTPRKQ15262 1439 aa15.34■□□□□ 0.05
EIF3CL-202ENST00000398944 GAPVD1Q14C86 1478 aa15.34■□□□□ 0.05
EIF3CL-202ENST00000398944 NEFLP07196 543 aa15.33■□□□□ 0.05
EIF3CL-202ENST00000398944 TONSLQ96HA7 1378 aa15.33■□□□□ 0.04
EIF3CL-202ENST00000398944 IL27Q8NEV9 243 aa15.32■□□□□ 0.04
EIF3CL-202ENST00000398944 CFAP43Q8NDM7 1665 aa15.31■□□□□ 0.04
EIF3CL-202ENST00000398944 EFCAB5A4FU69 1503 aa15.29■□□□□ 0.04
EIF3CL-202ENST00000398944 PDS5BQ9NTI5 1447 aa15.28■□□□□ 0.04
EIF3CL-202ENST00000398944 SNAPC4Q5SXM2 1469 aa15.27■□□□□ 0.04
EIF3CL-202ENST00000398944 NCOA2Q15596 1464 aa15.27■□□□□ 0.03
EIF3CL-202ENST00000398944 CCDC18Q5T9S5 1454 aa15.27■□□□□ 0.03
EIF3CL-202ENST00000398944 FOXD1Q16676 465 aa15.27■□□□□ 0.03
EIF3CL-202ENST00000398944 AQRO60306 1485 aaKnown RBP eCLIP15.26■□□□□ 0.03
EIF3CL-202ENST00000398944 ANP32CO43423 234 aa15.26■□□□□ 0.03
EIF3CL-202ENST00000398944 EIF5BO60841 1220 aaKnown RBP15.26■□□□□ 0.03
EIF3CL-202ENST00000398944 CUL7Q14999 1698 aa15.26■□□□□ 0.03
EIF3CL-202ENST00000398944 CTTNBP2Q8WZ74 1663 aa15.24■□□□□ 0.03
EIF3CL-202ENST00000398944 TIMELESSQ9UNS1 1208 aa15.23■□□□□ 0.03
EIF3CL-202ENST00000398944 MYOM3Q5VTT5 1437 aa15.22■□□□□ 0.03
EIF3CL-202ENST00000398944 LAMC3Q9Y6N6 1575 aa15.22■□□□□ 0.03
EIF3CL-202ENST00000398944 NAIPQ13075 1403 aa15.21■□□□□ 0.03
EIF3CL-202ENST00000398944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.21■□□□□ 0.02
EIF3CL-202ENST00000398944 HFM1A2PYH4 1435 aa15.19■□□□□ 0.02
EIF3CL-202ENST00000398944 GRIN2BQ13224 1484 aa15.19■□□□□ 0.02
EIF3CL-202ENST00000398944 UACAQ9BZF9 1416 aa15.18■□□□□ 0.02
EIF3CL-202ENST00000398944 ABCA5Q8WWZ7 1642 aa15.17■□□□□ 0.02
EIF3CL-202ENST00000398944 MAGI3Q5TCQ9 1506 aa15.16■□□□□ 0.02
EIF3CL-202ENST00000398944 ZNF644Q9H582 1327 aaPredicted RBP15.16■□□□□ 0.02
EIF3CL-202ENST00000398944 FBLN2P98095 1184 aa15.15■□□□□ 0.02
EIF3CL-202ENST00000398944 CNGB1Q14028 1251 aaPredicted RBP15.15■□□□□ 0.02
EIF3CL-202ENST00000398944 KIF21AQ7Z4S6 1674 aa15.15■□□□□ 0.02
EIF3CL-202ENST00000398944 LRRIQ1Q96JM4 1722 aa15.15■□□□□ 0.02
EIF3CL-202ENST00000398944 PTPN23Q9H3S7 1636 aa15.15■□□□□ 0.02
EIF3CL-202ENST00000398944 CDK13Q14004 1512 aaKnown RBP15.15■□□□□ 0.02
EIF3CL-202ENST00000398944 HSPA5P11021 654 aaKnown RBP15.14■□□□□ 0.01
EIF3CL-202ENST00000398944 SAMD9Q5K651 1589 aa15.14■□□□□ 0.01
EIF3CL-202ENST00000398944 CDK11AQ9UQ88 783 aaPredicted RBP15.14■□□□□ 0.01
EIF3CL-202ENST00000398944 MPHOSPH9Q99550 1183 aa15.13■□□□□ 0.01
EIF3CL-202ENST00000398944 PAK3O75914 559 aaPredicted RBP15.13■□□□□ 0.01
EIF3CL-202ENST00000398944 ZNF777Q9ULD5 760 aaPredicted RBP15.11■□□□□ 0.01
EIF3CL-202ENST00000398944 L3MBTL2Q969R5 705 aa15.11■□□□□ 0.01
EIF3CL-202ENST00000398944 SUPT6HQ7KZ85 1726 aaKnown RBP15.1■□□□□ 0.01
EIF3CL-202ENST00000398944 CCER2I3L3R5 266 aa15.1■□□□□ 0.01
EIF3CL-202ENST00000398944 EHBP1L1Q8N3D4 1523 aa15.09■□□□□ 0.01
EIF3CL-202ENST00000398944 ZNF608Q9ULD9 1512 aaPredicted RBP15.09■□□□□ 0.01
EIF3CL-202ENST00000398944 HNRNPUQ00839 825 aaKnown RBP eCLIP15.09■□□□□ 0.01
EIF3CL-202ENST00000398944 EPRSP07814 1512 aaKnown RBP15.08■□□□□ 0.01
EIF3CL-202ENST00000398944 UGGT2Q9NYU1 1516 aa15.08■□□□□ 0
EIF3CL-202ENST00000398944 TARBP1Q13395 1621 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms