RNA–Protein interactions for RNA: ENST00000398540.7

FRMD4B-201, Transcript of FERM domain containing 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRMD4B, Length 5,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4B-201ENST00000398540 VPS8Q8N3P4 1428 aa19.4■□□□□ 0.7
FRMD4B-201ENST00000398540 NCAPD3P42695 1498 aa19.4■□□□□ 0.7
FRMD4B-201ENST00000398540 STAG3Q9UJ98 1225 aa19.4■□□□□ 0.7
FRMD4B-201ENST00000398540 RUSC2Q8N2Y8 1516 aa19.39■□□□□ 0.7
FRMD4B-201ENST00000398540 KDM2AQ9Y2K7 1162 aa19.35■□□□□ 0.69
FRMD4B-201ENST00000398540 RAPGEF2Q9Y4G8 1499 aa19.34■□□□□ 0.69
FRMD4B-201ENST00000398540 DDX10Q13206 875 aaKnown RBP19.33■□□□□ 0.69
FRMD4B-201ENST00000398540 KANK4Q5T7N3 995 aaPredicted RBP19.33■□□□□ 0.68
FRMD4B-201ENST00000398540 CCNB3Q8WWL7 1395 aa19.31■□□□□ 0.68
FRMD4B-201ENST00000398540 HIRIP3Q9BW71 556 aaPredicted RBP19.28■□□□□ 0.68
FRMD4B-201ENST00000398540 CARMIL2Q6F5E8 1435 aa19.24■□□□□ 0.67
FRMD4B-201ENST00000398540 FGD5Q6ZNL6 1462 aa19.23■□□□□ 0.67
FRMD4B-201ENST00000398540 FHOD3Q2V2M9 1422 aa19.22■□□□□ 0.67
FRMD4B-201ENST00000398540 GTF3C3Q9Y5Q9 886 aa19.21■□□□□ 0.67
FRMD4B-201ENST00000398540 FMN1Q68DA7 1419 aa19.21■□□□□ 0.67
FRMD4B-201ENST00000398540 RGL3Q3MIN7 710 aa19.19■□□□□ 0.66
FRMD4B-201ENST00000398540 RAD54L2Q9Y4B4 1467 aa19.18■□□□□ 0.66
FRMD4B-201ENST00000398540 ARHGAP35Q9NRY4 1499 aa19.17■□□□□ 0.66
FRMD4B-201ENST00000398540 SIN3AQ96ST3 1273 aa19.17■□□□□ 0.66
FRMD4B-201ENST00000398540 SENP3Q9H4L4 574 aaPredicted RBP19.17■□□□□ 0.66
FRMD4B-201ENST00000398540 BICRAQ9NZM4 1560 aa19.17■□□□□ 0.66
FRMD4B-201ENST00000398540 CC2D2AQ9P2K1 1620 aa19.15■□□□□ 0.66
FRMD4B-201ENST00000398540 EIF4G2P78344 907 aaKnown RBP eCLIP19.13■□□□□ 0.65
FRMD4B-201ENST00000398540 IGF1RP08069 1367 aa19.12■□□□□ 0.65
FRMD4B-201ENST00000398540 JPH4Q96JJ6 628 aa19.12■□□□□ 0.65
FRMD4B-201ENST00000398540 ACIN1Q9UKV3 1341 aaKnown RBP19.11■□□□□ 0.65
FRMD4B-201ENST00000398540 CFTRP13569 1480 aa19.1■□□□□ 0.65
FRMD4B-201ENST00000398540 NESP48681 1621 aa19.1■□□□□ 0.65
FRMD4B-201ENST00000398540 GAPVD1Q14C86 1478 aa19.09■□□□□ 0.65
FRMD4B-201ENST00000398540 FAM9BQ8IZU0 186 aa19.09■□□□□ 0.65
FRMD4B-201ENST00000398540 DAXXQ9UER7 740 aaPredicted RBP19.08■□□□□ 0.64
FRMD4B-201ENST00000398540 NEFMP07197 916 aa19.07■□□□□ 0.64
FRMD4B-201ENST00000398540 CLSPNQ9HAW4 1339 aa19.07■□□□□ 0.64
FRMD4B-201ENST00000398540 HMGXB3Q12766 1538 aa19.07■□□□□ 0.64
FRMD4B-201ENST00000398540 ARID4BQ4LE39 1312 aaPredicted RBP19.05■□□□□ 0.64
FRMD4B-201ENST00000398540 HNRNPUQ00839 825 aaKnown RBP eCLIP19.05■□□□□ 0.64
FRMD4B-201ENST00000398540 MIER1Q8N108 512 aa19.05■□□□□ 0.64
FRMD4B-201ENST00000398540 SLC24A1O60721 1099 aa19.03■□□□□ 0.64
FRMD4B-201ENST00000398540 SETD5Q9C0A6 1442 aa19.03■□□□□ 0.64
FRMD4B-201ENST00000398540 SYNJ1O43426 1573 aa19.02■□□□□ 0.64
FRMD4B-201ENST00000398540 AQRO60306 1485 aaKnown RBP eCLIP19.01■□□□□ 0.63
FRMD4B-201ENST00000398540 PPP1R15AO75807 674 aaPredicted RBP19■□□□□ 0.63
FRMD4B-201ENST00000398540 CANXP27824 592 aaKnown RBP18.99■□□□□ 0.63
FRMD4B-201ENST00000398540 TMC1Q8TDI8 760 aa18.99■□□□□ 0.63
FRMD4B-201ENST00000398540 SALL2Q9Y467 1007 aaPredicted RBP18.98■□□□□ 0.63
FRMD4B-201ENST00000398540 MRS2Q9HD23 443 aa18.97■□□□□ 0.63
FRMD4B-201ENST00000398540 CARD11Q9BXL7 1154 aa18.96■□□□□ 0.63
FRMD4B-201ENST00000398540 RAB3GAP2Q9H2M9 1393 aa18.95■□□□□ 0.62
FRMD4B-201ENST00000398540 FOXD1Q16676 465 aa18.94■□□□□ 0.62
FRMD4B-201ENST00000398540 EFCAB2Q5VUJ9 269 aa18.93■□□□□ 0.62
FRMD4B-201ENST00000398540 TRHP20396 242 aaPredicted RBP18.91■□□□□ 0.62
FRMD4B-201ENST00000398540 CCDC18Q5T9S5 1454 aa18.91■□□□□ 0.62
FRMD4B-201ENST00000398540 DNAJC5BQ9UF47 199 aa18.91■□□□□ 0.62
FRMD4B-201ENST00000398540 HNRNPMP52272 730 aaKnown RBP eCLIP18.89■□□□□ 0.61
FRMD4B-201ENST00000398540 CUX1P39880 1505 aa18.89■□□□□ 0.61
FRMD4B-201ENST00000398540 PKD2Q13563 968 aa18.89■□□□□ 0.61
FRMD4B-201ENST00000398540 UNC13AQ9UPW8 1703 aa18.88■□□□□ 0.61
FRMD4B-201ENST00000398540 PTPRGP23470 1445 aa18.88■□□□□ 0.61
FRMD4B-201ENST00000398540 MLECQ14165 292 aa18.88■□□□□ 0.61
FRMD4B-201ENST00000398540 DCAF11Q8TEB1 546 aa18.87■□□□□ 0.61
FRMD4B-201ENST00000398540 GGT6Q6P531 493 aa18.87■□□□□ 0.61
FRMD4B-201ENST00000398540 TOPBP1Q92547 1522 aa18.86■□□□□ 0.61
FRMD4B-201ENST00000398540 KANK1Q14678 1352 aa18.86■□□□□ 0.61
FRMD4B-201ENST00000398540 BCL11AQ9H165 835 aa18.85■□□□□ 0.61
FRMD4B-201ENST00000398540 TOP2BQ02880 1626 aa18.85■□□□□ 0.61
FRMD4B-201ENST00000398540 WDR43Q15061 677 aaKnown RBP eCLIP18.85■□□□□ 0.61
FRMD4B-201ENST00000398540 MRC2Q9UBG0 1479 aa18.85■□□□□ 0.61
FRMD4B-201ENST00000398540 ANKRD30AQ9BXX3 1397 aa18.84■□□□□ 0.61
FRMD4B-201ENST00000398540 MPHOSPH9Q99550 1183 aa18.83■□□□□ 0.61
FRMD4B-201ENST00000398540 FKBP8Q14318 412 aa18.83■□□□□ 0.61
FRMD4B-201ENST00000398540 POLA1P09884 1462 aaPredicted RBP18.83■□□□□ 0.6
FRMD4B-201ENST00000398540 NUP155O75694 1391 aa18.82■□□□□ 0.6
FRMD4B-201ENST00000398540 GRIN2BQ13224 1484 aa18.82■□□□□ 0.6
FRMD4B-201ENST00000398540 KIF21BO75037 1637 aa18.81■□□□□ 0.6
FRMD4B-201ENST00000398540 TIMELESSQ9UNS1 1208 aa18.8■□□□□ 0.6
FRMD4B-201ENST00000398540 ZBTB47Q9UFB7 747 aaPredicted RBP18.8■□□□□ 0.6
FRMD4B-201ENST00000398540 OSCARQ8IYS5 282 aa18.79■□□□□ 0.6
FRMD4B-201ENST00000398540 CDCA8Q53HL2 280 aa18.76■□□□□ 0.59
FRMD4B-201ENST00000398540 ERICH3Q5RHP9 1530 aa18.76■□□□□ 0.59
FRMD4B-201ENST00000398540 KIF3BO15066 747 aa18.74■□□□□ 0.59
FRMD4B-201ENST00000398540 SPAG9O60271 1321 aaKnown RBP18.74■□□□□ 0.59
FRMD4B-201ENST00000398540 SENP3-EIF4A1A0A087X0R7 540 aa18.74■□□□□ 0.59
FRMD4B-201ENST00000398540 PLEKHG5O94827 1062 aa18.73■□□□□ 0.59
FRMD4B-201ENST00000398540 C14orf37Q86TY3 774 aa18.73■□□□□ 0.59
FRMD4B-201ENST00000398540 KNSTRNQ9Y448 316 aa18.73■□□□□ 0.59
FRMD4B-201ENST00000398540 CYB5RLQ6IPT4 315 aa18.73■□□□□ 0.59
FRMD4B-201ENST00000398540 IFT140Q96RY7 1462 aa18.73■□□□□ 0.59
FRMD4B-201ENST00000398540 PRXQ9BXM0 1461 aa18.73■□□□□ 0.59
FRMD4B-201ENST00000398540 DNMBPQ6XZF7 1577 aa18.73■□□□□ 0.59
FRMD4B-201ENST00000398540 PEG3Q9GZU2 1588 aa18.72■□□□□ 0.59
FRMD4B-201ENST00000398540 RSPH4AQ5TD94 716 aa18.71■□□□□ 0.59
FRMD4B-201ENST00000398540 POGKQ9P215 609 aa18.71■□□□□ 0.59
FRMD4B-201ENST00000398540 ARAP1Q96P48 1450 aa18.71■□□□□ 0.59
FRMD4B-201ENST00000398540 SCAF1Q9H7N4 1312 aaKnown RBP18.71■□□□□ 0.59
FRMD4B-201ENST00000398540 HSPA5P11021 654 aaKnown RBP18.68■□□□□ 0.58
FRMD4B-201ENST00000398540 LAMC3Q9Y6N6 1575 aa18.66■□□□□ 0.58
FRMD4B-201ENST00000398540 ZBTB7CA1YPR0 619 aa18.65■□□□□ 0.58
FRMD4B-201ENST00000398540 PRDM2Q13029 1718 aa18.65■□□□□ 0.58
FRMD4B-201ENST00000398540 PHLDB1Q86UU1 1377 aa18.64■□□□□ 0.57
FRMD4B-201ENST00000398540 CASKIN1Q8WXD9 1431 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms