RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 UBE2Q2Q8WVN8 375 aa11.76□□□□□ -0.53
TCF4-203ENST00000398339 CUX1P39880 1505 aa11.76□□□□□ -0.53
TCF4-203ENST00000398339 FKBP8Q14318 412 aa11.74□□□□□ -0.53
TCF4-203ENST00000398339 BCANQ96GW7 911 aa11.74□□□□□ -0.53
TCF4-203ENST00000398339 SETD5Q9C0A6 1442 aa11.73□□□□□ -0.53
TCF4-203ENST00000398339 MAP3K1Q13233 1512 aa11.72□□□□□ -0.53
TCF4-203ENST00000398339 DDX10Q13206 875 aaKnown RBP11.72□□□□□ -0.53
TCF4-203ENST00000398339 WDR97A6NE52 1622 aa11.71□□□□□ -0.53
TCF4-203ENST00000398339 PPP1R15AO75807 674 aaPredicted RBP11.71□□□□□ -0.54
TCF4-203ENST00000398339 TIAM1Q13009 1591 aa11.7□□□□□ -0.54
TCF4-203ENST00000398339 ANO8Q9HCE9 1232 aaPredicted RBP11.7□□□□□ -0.54
TCF4-203ENST00000398339 SIN3AQ96ST3 1273 aa11.68□□□□□ -0.54
TCF4-203ENST00000398339 TIMELESSQ9UNS1 1208 aa11.68□□□□□ -0.54
TCF4-203ENST00000398339 CCER2I3L3R5 266 aa11.67□□□□□ -0.54
TCF4-203ENST00000398339 NEFLP07196 543 aa11.67□□□□□ -0.54
TCF4-203ENST00000398339 LRRC9Q6ZRR7 1453 aa11.66□□□□□ -0.54
TCF4-203ENST00000398339 PHLDB1Q86UU1 1377 aa11.66□□□□□ -0.54
TCF4-203ENST00000398339 RBM19Q9Y4C8 960 aaKnown RBP11.66□□□□□ -0.54
TCF4-203ENST00000398339 HMGXB3Q12766 1538 aa11.65□□□□□ -0.55
TCF4-203ENST00000398339 NCAPD3P42695 1498 aa11.63□□□□□ -0.55
TCF4-203ENST00000398339 CFTRP13569 1480 aa11.63□□□□□ -0.55
TCF4-203ENST00000398339 ANP32CO43423 234 aa11.63□□□□□ -0.55
TCF4-203ENST00000398339 IGF1RP08069 1367 aa11.63□□□□□ -0.55
TCF4-203ENST00000398339 FAM50AQ14320 339 aaKnown RBP11.62□□□□□ -0.55
TCF4-203ENST00000398339 TRIM52Q96A61 297 aa11.61□□□□□ -0.55
TCF4-203ENST00000398339 HIRIP3Q9BW71 556 aaPredicted RBP11.59□□□□□ -0.55
TCF4-203ENST00000398339 CFAP43Q8NDM7 1665 aa11.59□□□□□ -0.55
TCF4-203ENST00000398339 FHAD1B1AJZ9 1412 aa11.59□□□□□ -0.55
TCF4-203ENST00000398339 PODXL2Q9NZ53 605 aa11.58□□□□□ -0.56
TCF4-203ENST00000398339 CARMIL1Q5VZK9 1371 aa11.58□□□□□ -0.56
TCF4-203ENST00000398339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.56□□□□□ -0.56
TCF4-203ENST00000398339 PCF11O94913 1555 aaKnown RBP11.56□□□□□ -0.56
TCF4-203ENST00000398339 MSH5O43196 834 aa11.53□□□□□ -0.56
TCF4-203ENST00000398339 TONSLQ96HA7 1378 aa11.52□□□□□ -0.56
TCF4-203ENST00000398339 PRDM2Q13029 1718 aa11.51□□□□□ -0.57
TCF4-203ENST00000398339 FYCO1Q9BQS8 1478 aa11.5□□□□□ -0.57
TCF4-203ENST00000398339 P3H3Q8IVL6 736 aa11.5□□□□□ -0.57
TCF4-203ENST00000398339 PKNOX2Q96KN3 472 aa11.5□□□□□ -0.57
TCF4-203ENST00000398339 FANCIQ9NVI1 1328 aa11.5□□□□□ -0.57
TCF4-203ENST00000398339 FGD5Q6ZNL6 1462 aa11.5□□□□□ -0.57
TCF4-203ENST00000398339 ATP1B4Q9UN42 357 aaPredicted RBP11.49□□□□□ -0.57
TCF4-203ENST00000398339 CASKIN1Q8WXD9 1431 aa11.49□□□□□ -0.57
TCF4-203ENST00000398339 CCDC18Q5T9S5 1454 aa11.48□□□□□ -0.57
TCF4-203ENST00000398339 FHOD3Q2V2M9 1422 aa11.48□□□□□ -0.57
TCF4-203ENST00000398339 AQRO60306 1485 aaKnown RBP eCLIP11.48□□□□□ -0.57
TCF4-203ENST00000398339 FGD6Q6ZV73 1430 aa11.47□□□□□ -0.57
TCF4-203ENST00000398339 UACAQ9BZF9 1416 aa11.47□□□□□ -0.57
TCF4-203ENST00000398339 HNRNPUQ00839 825 aaKnown RBP eCLIP11.47□□□□□ -0.57
TCF4-203ENST00000398339 CDK11AQ9UQ88 783 aaPredicted RBP11.47□□□□□ -0.57
TCF4-203ENST00000398339 EFCAB5A4FU69 1503 aa11.46□□□□□ -0.57
TCF4-203ENST00000398339 HFM1A2PYH4 1435 aa11.46□□□□□ -0.57
TCF4-203ENST00000398339 KDM5BQ9UGL1 1544 aa11.44□□□□□ -0.58
TCF4-203ENST00000398339 PTPN23Q9H3S7 1636 aa11.44□□□□□ -0.58
TCF4-203ENST00000398339 PTPRKQ15262 1439 aa11.44□□□□□ -0.58
TCF4-203ENST00000398339 ERICH6BQ5W0A0 696 aa11.44□□□□□ -0.58
TCF4-203ENST00000398339 CADPSQ9ULU8 1353 aa11.44□□□□□ -0.58
TCF4-203ENST00000398339 IRX6P78412 446 aaPredicted RBP11.43□□□□□ -0.58
TCF4-203ENST00000398339 NAIPQ13075 1403 aa11.41□□□□□ -0.58
TCF4-203ENST00000398339 SALL2Q9Y467 1007 aaPredicted RBP11.4□□□□□ -0.58
TCF4-203ENST00000398339 FMN1Q68DA7 1419 aa11.4□□□□□ -0.58
TCF4-203ENST00000398339 PPP4R2Q9NY27 417 aa11.4□□□□□ -0.58
TCF4-203ENST00000398339 WASHC2AQ641Q2 1341 aa11.4□□□□□ -0.58
TCF4-203ENST00000398339 SNAPC4Q5SXM2 1469 aa11.39□□□□□ -0.59
TCF4-203ENST00000398339 HSPA5P11021 654 aaKnown RBP11.39□□□□□ -0.59
TCF4-203ENST00000398339 MTUS2Q5JR59 1369 aa11.39□□□□□ -0.59
TCF4-203ENST00000398339 NCOA2Q15596 1464 aa11.38□□□□□ -0.59
TCF4-203ENST00000398339 MYOM3Q5VTT5 1437 aa11.37□□□□□ -0.59
TCF4-203ENST00000398339 ABCA10Q8WWZ4 1543 aa11.36□□□□□ -0.59
TCF4-203ENST00000398339 CC2D2AQ9P2K1 1620 aa11.36□□□□□ -0.59
TCF4-203ENST00000398339 CNTLNQ9NXG0 1405 aa11.36□□□□□ -0.59
TCF4-203ENST00000398339 CTTNBP2Q8WZ74 1663 aa11.36□□□□□ -0.59
TCF4-203ENST00000398339 NCBP3Q53F19 620 aaKnown RBP11.35□□□□□ -0.59
TCF4-203ENST00000398339 RAD54L2Q9Y4B4 1467 aa11.35□□□□□ -0.59
TCF4-203ENST00000398339 CCDC136Q96JN2 1154 aa11.35□□□□□ -0.59
TCF4-203ENST00000398339 CUL7Q14999 1698 aa11.35□□□□□ -0.59
TCF4-203ENST00000398339 MYT1LQ9UL68 1186 aa11.34□□□□□ -0.59
TCF4-203ENST00000398339 EIF4G2P78344 907 aaKnown RBP eCLIP11.34□□□□□ -0.592e-7■■■■■ 31.9
TCF4-203ENST00000398339 CCDC184Q52MB2 194 aa11.34□□□□□ -0.59
TCF4-203ENST00000398339 FANCD2Q9BXW9 1451 aa11.33□□□□□ -0.6
TCF4-203ENST00000398339 DNMBPQ6XZF7 1577 aa11.32□□□□□ -0.6
TCF4-203ENST00000398339 DENND4BO75064 1496 aaPredicted RBP11.32□□□□□ -0.6
TCF4-203ENST00000398339 GRIN2BQ13224 1484 aa11.32□□□□□ -0.6
TCF4-203ENST00000398339 SUPT6HQ7KZ85 1726 aaKnown RBP11.31□□□□□ -0.6
TCF4-203ENST00000398339 POLA1P09884 1462 aaPredicted RBP11.31□□□□□ -0.6
TCF4-203ENST00000398339 ZBED9Q6R2W3 1325 aa11.31□□□□□ -0.6
TCF4-203ENST00000398339 EHBP1L1Q8N3D4 1523 aa11.31□□□□□ -0.6
TCF4-203ENST00000398339 PRKRIP1Q9H875 184 aaPredicted RBP11.31□□□□□ -0.6
TCF4-203ENST00000398339 LRRIQ1Q96JM4 1722 aa11.31□□□□□ -0.6
TCF4-203ENST00000398339 NCOA1Q15788 1441 aa11.31□□□□□ -0.6
TCF4-203ENST00000398339 HECW1Q76N89 1606 aa11.31□□□□□ -0.6
TCF4-203ENST00000398339 SAMD9Q5K651 1589 aa11.3□□□□□ -0.6
TCF4-203ENST00000398339 THOC2Q8NI27 1593 aaKnown RBP11.3□□□□□ -0.6
TCF4-203ENST00000398339 CCDC7Q96M83 1385 aa11.3□□□□□ -0.6
TCF4-203ENST00000398339 B4GALNT3Q6L9W6 998 aa11.3□□□□□ -0.6
TCF4-203ENST00000398339 RRP7BPQ9NSQ0 103 aa11.29□□□□□ -0.6
TCF4-203ENST00000398339 UGGT2Q9NYU1 1516 aa11.29□□□□□ -0.6
TCF4-203ENST00000398339 FAM9BQ8IZU0 186 aa11.29□□□□□ -0.6
TCF4-203ENST00000398339 ARHGEF11O15085 1522 aa11.29□□□□□ -0.6
TCF4-203ENST00000398339 TOPBP1Q92547 1522 aa11.29□□□□□ -0.6
TCF4-203ENST00000398339 GCC2Q8IWJ2 1684 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms