RNA–Protein interactions for RNA: ENST00000398213.4

PYM1-202, Transcript of PYM homolog 1, exon junction complex associated factor, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PYM1, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PYM1-202ENST00000398213 TOPBP1Q92547 1522 aa18.55■□□□□ 0.56
PYM1-202ENST00000398213 ARHGEF11O15085 1522 aa18.53■□□□□ 0.56
PYM1-202ENST00000398213 ABCC8Q09428 1581 aa18.52■□□□□ 0.56
PYM1-202ENST00000398213 EIF4G3O43432 1585 aaKnown RBP18.51■□□□□ 0.55
PYM1-202ENST00000398213 ZBTB12Q9Y330 459 aaPredicted RBP18.49■□□□□ 0.55
PYM1-202ENST00000398213 DNMBPQ6XZF7 1577 aa18.48■□□□□ 0.55
PYM1-202ENST00000398213 AKT1S1Q96B36 256 aa18.45■□□□□ 0.54
PYM1-202ENST00000398213 CHD1O14646 1710 aa18.43■□□□□ 0.54
PYM1-202ENST00000398213 CYB5RLQ6IPT4 315 aa18.41■□□□□ 0.54
PYM1-202ENST00000398213 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.548e-7■■■■■ 28.7
PYM1-202ENST00000398213 TARBP1Q13395 1621 aaKnown RBP18.39■□□□□ 0.53
PYM1-202ENST00000398213 FBLN2P98095 1184 aa18.38■□□□□ 0.53
PYM1-202ENST00000398213 POLA1P09884 1462 aaPredicted RBP18.34■□□□□ 0.53
PYM1-202ENST00000398213 ARAP1Q96P48 1450 aa18.33■□□□□ 0.52
PYM1-202ENST00000398213 ZBTB22O15209 634 aa18.32■□□□□ 0.52
PYM1-202ENST00000398213 REM2Q8IYK8 340 aaPredicted RBP18.31■□□□□ 0.52
PYM1-202ENST00000398213 SOGA1O94964 1423 aa18.27■□□□□ 0.52
PYM1-202ENST00000398213 RAD54L2Q9Y4B4 1467 aa18.26■□□□□ 0.51
PYM1-202ENST00000398213 TDRD9Q8NDG6 1382 aaKnown RBP18.25■□□□□ 0.51
PYM1-202ENST00000398213 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
PYM1-202ENST00000398213 SNAPC4Q5SXM2 1469 aa18.23■□□□□ 0.51
PYM1-202ENST00000398213 FGD5Q6ZNL6 1462 aa18.2■□□□□ 0.5
PYM1-202ENST00000398213 PIP4P2Q8N4L2 257 aa18.2■□□□□ 0.5
PYM1-202ENST00000398213 SYNJ1O43426 1573 aa18.2■□□□□ 0.5
PYM1-202ENST00000398213 CHMP7Q8WUX9 453 aaPredicted RBP18.19■□□□□ 0.5
PYM1-202ENST00000398213 CLASP1Q7Z460 1538 aa18.18■□□□□ 0.5
PYM1-202ENST00000398213 SP7Q8TDD2 431 aaPredicted RBP18.17■□□□□ 0.5
PYM1-202ENST00000398213 MAGI1Q96QZ7 1491 aaPredicted RBP18.17■□□□□ 0.5
PYM1-202ENST00000398213 PITPNM1O00562 1244 aa18.15■□□□□ 0.5
PYM1-202ENST00000398213 GRIN2BQ13224 1484 aa18.14■□□□□ 0.5
PYM1-202ENST00000398213 CUX1P39880 1505 aa18.13■□□□□ 0.49
PYM1-202ENST00000398213 SYNJ2O15056 1496 aa18.11■□□□□ 0.49
PYM1-202ENST00000398213 PBRM1Q86U86 1689 aa18.08■□□□□ 0.48
PYM1-202ENST00000398213 ATXN8OSP0DMR3 200 aa18.05■□□□□ 0.48
PYM1-202ENST00000398213 GAPVD1Q14C86 1478 aa18.04■□□□□ 0.48
PYM1-202ENST00000398213 HAX1O00165 279 aa18.02■□□□□ 0.48
PYM1-202ENST00000398213 FXR2P51116 673 aaKnown RBP eCLIP17.98■□□□□ 0.47
PYM1-202ENST00000398213 ABCA5Q8WWZ7 1642 aa17.98■□□□□ 0.47
PYM1-202ENST00000398213 ABCA10Q8WWZ4 1543 aa17.98■□□□□ 0.47
PYM1-202ENST00000398213 GRIN2AQ12879 1464 aa17.9■□□□□ 0.46
PYM1-202ENST00000398213 SPDYE2BA6NHP3 402 aa17.9■□□□□ 0.46
PYM1-202ENST00000398213 SPDYE6P0CI01 402 aa17.9■□□□□ 0.46
PYM1-202ENST00000398213 SPDYE2Q495Y8 402 aa17.9■□□□□ 0.46
PYM1-202ENST00000398213 WRNQ14191 1432 aaPredicted RBP eCLIP17.88■□□□□ 0.45
PYM1-202ENST00000398213 ADAMTS12P58397 1594 aa17.87■□□□□ 0.45
PYM1-202ENST00000398213 ERCC6L2Q5T890 1561 aa17.87■□□□□ 0.45
PYM1-202ENST00000398213 CEP170Q5SW79 1584 aa17.85■□□□□ 0.45
PYM1-202ENST00000398213 NUP160Q12769 1436 aa17.83■□□□□ 0.45
PYM1-202ENST00000398213 SUPT5HO00267 1087 aaKnown RBP17.81■□□□□ 0.44
PYM1-202ENST00000398213 BIVM-ERCC5R4GMW8 1640 aa17.8■□□□□ 0.44
PYM1-202ENST00000398213 CLEC11AQ9Y240 323 aa17.8■□□□□ 0.44
PYM1-202ENST00000398213 FHAD1B1AJZ9 1412 aa17.8■□□□□ 0.44
PYM1-202ENST00000398213 TOP2BQ02880 1626 aa17.8■□□□□ 0.44
PYM1-202ENST00000398213 SHROOM2Q13796 1616 aa17.8■□□□□ 0.44
PYM1-202ENST00000398213 MKRN4PQ13434 485 aaPredicted RBP17.76■□□□□ 0.43
PYM1-202ENST00000398213 ERICH3Q5RHP9 1530 aa17.76■□□□□ 0.43
PYM1-202ENST00000398213 EVX2Q03828 476 aa17.73■□□□□ 0.43
PYM1-202ENST00000398213 ZNF692Q9BU19 519 aaPredicted RBP17.71■□□□□ 0.43
PYM1-202ENST00000398213 PRKAR2AP13861 404 aaKnown RBP17.7■□□□□ 0.42
PYM1-202ENST00000398213 SPDYE1Q8NFV5 336 aaPredicted RBP17.7■□□□□ 0.42
PYM1-202ENST00000398213 PRG4Q92954 1404 aaPredicted RBP17.7■□□□□ 0.42
PYM1-202ENST00000398213 KIF13AQ9H1H9 1805 aa17.7■□□□□ 0.42
PYM1-202ENST00000398213 JPH4Q96JJ6 628 aa17.66■□□□□ 0.42
PYM1-202ENST00000398213 RUSC2Q8N2Y8 1516 aa17.63■□□□□ 0.41
PYM1-202ENST00000398213 NPM1P06748 294 aaKnown RBP eCLIP17.63■□□□□ 0.41
PYM1-202ENST00000398213 SSUH2Q9Y2M2 353 aa17.61■□□□□ 0.41
PYM1-202ENST00000398213 FAM69CQ0P6D2 419 aa17.58■□□□□ 0.4
PYM1-202ENST00000398213 ABCC10Q5T3U5 1492 aa17.57■□□□□ 0.4
PYM1-202ENST00000398213 MAPKBP1O60336 1514 aa17.56■□□□□ 0.4
PYM1-202ENST00000398213 DIP2BQ9P265 1576 aa17.53■□□□□ 0.4
PYM1-202ENST00000398213 ADCY10Q96PN6 1610 aa17.53■□□□□ 0.4
PYM1-202ENST00000398213 KIAA0586Q9BVV6 1533 aa17.5■□□□□ 0.39
PYM1-202ENST00000398213 KDM6BO15054 1643 aa17.49■□□□□ 0.39
PYM1-202ENST00000398213 CUL7Q14999 1698 aa17.48■□□□□ 0.39
PYM1-202ENST00000398213 CHADLQ6NUI6 762 aa17.48■□□□□ 0.39
PYM1-202ENST00000398213 TSPOAP1O95153 1857 aa17.46■□□□□ 0.39
PYM1-202ENST00000398213 KIF27Q86VH2 1401 aa17.46■□□□□ 0.39
PYM1-202ENST00000398213 C19orf67A6NJJ6 358 aa17.43■□□□□ 0.38
PYM1-202ENST00000398213 IGF1RP08069 1367 aa17.42■□□□□ 0.38
PYM1-202ENST00000398213 TTBK1Q5TCY1 1321 aaPredicted RBP17.4■□□□□ 0.38
PYM1-202ENST00000398213 PTPRGP23470 1445 aa17.39■□□□□ 0.38
PYM1-202ENST00000398213 PRR29P0C7W0 189 aa17.39■□□□□ 0.37
PYM1-202ENST00000398213 CARMIL2Q6F5E8 1435 aa17.38■□□□□ 0.37
PYM1-202ENST00000398213 KDM4FA0A1W2PPD8 638 aa17.35■□□□□ 0.37
PYM1-202ENST00000398213 TNIKQ9UKE5 1360 aa17.35■□□□□ 0.37
PYM1-202ENST00000398213 CARMIL1Q5VZK9 1371 aa17.34■□□□□ 0.37
PYM1-202ENST00000398213 ABCC2Q92887 1545 aa17.34■□□□□ 0.37
PYM1-202ENST00000398213 IQGAP2Q13576 1575 aa17.32■□□□□ 0.36
PYM1-202ENST00000398213 PLB1Q6P1J6 1458 aa17.31■□□□□ 0.36
PYM1-202ENST00000398213 ASXL2Q76L83 1435 aa17.3■□□□□ 0.36
PYM1-202ENST00000398213 GABBR2O75899 941 aa17.29■□□□□ 0.36
PYM1-202ENST00000398213 GLI2P10070 1586 aa17.28■□□□□ 0.36
PYM1-202ENST00000398213 UHRF1BP1LA0JNW5 1464 aa17.26■□□□□ 0.35
PYM1-202ENST00000398213 PPRC1Q5VV67 1664 aaKnown RBP17.26■□□□□ 0.35
PYM1-202ENST00000398213 UACAQ9BZF9 1416 aa17.25■□□□□ 0.35
PYM1-202ENST00000398213 DISP1Q96F81 1524 aa17.21■□□□□ 0.34
PYM1-202ENST00000398213 ADGRL1O94910 1474 aa17.2■□□□□ 0.34
PYM1-202ENST00000398213 TEX14Q8IWB6 1497 aa17.19■□□□□ 0.34
PYM1-202ENST00000398213 MAP3K4Q9Y6R4 1608 aa17.19■□□□□ 0.34
PYM1-202ENST00000398213 EPRSP07814 1512 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms