RNA–Protein interactions for RNA: ENST00000398080.5

SCML1-204, Transcript of Scm polycomb group protein like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCML1, Length 2,704 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML1-204ENST00000398080 CUX2O14529 1486 aa17.76■□□□□ 0.43
SCML1-204ENST00000398080 IGF1RP08069 1367 aa17.74■□□□□ 0.43
SCML1-204ENST00000398080 SETD5Q9C0A6 1442 aa17.67■□□□□ 0.42
SCML1-204ENST00000398080 CARMIL1Q5VZK9 1371 aa17.66■□□□□ 0.42
SCML1-204ENST00000398080 CFTRP13569 1480 aa17.65■□□□□ 0.42
SCML1-204ENST00000398080 FHOD3Q2V2M9 1422 aa17.65■□□□□ 0.42
SCML1-204ENST00000398080 IRX6P78412 446 aaPredicted RBP17.64■□□□□ 0.41
SCML1-204ENST00000398080 NCAPD3P42695 1498 aa17.63■□□□□ 0.41
SCML1-204ENST00000398080 TIAM1Q13009 1591 aa17.63■□□□□ 0.41
SCML1-204ENST00000398080 PPP1R15AO75807 674 aaPredicted RBP17.63■□□□□ 0.41
SCML1-204ENST00000398080 LRRC9Q6ZRR7 1453 aa17.62■□□□□ 0.41
SCML1-204ENST00000398080 MYT1Q01538 1121 aa17.6■□□□□ 0.41
SCML1-204ENST00000398080 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
SCML1-204ENST00000398080 RAD54L2Q9Y4B4 1467 aa17.57■□□□□ 0.4
SCML1-204ENST00000398080 ARID3CA6NKF2 412 aa17.56■□□□□ 0.4
SCML1-204ENST00000398080 PCF11O94913 1555 aaKnown RBP17.56■□□□□ 0.4
SCML1-204ENST00000398080 HMGXB3Q12766 1538 aa17.53■□□□□ 0.4
SCML1-204ENST00000398080 CHIC2Q9UKJ5 165 aa17.51■□□□□ 0.39
SCML1-204ENST00000398080 PTPRKQ15262 1439 aa17.5■□□□□ 0.39
SCML1-204ENST00000398080 SENP3-EIF4A1A0A087X0R7 540 aa17.49■□□□□ 0.39
SCML1-204ENST00000398080 ANP32EQ9BTT0 268 aa17.49■□□□□ 0.39
SCML1-204ENST00000398080 CNGB1Q14028 1251 aaPredicted RBP17.49■□□□□ 0.39
SCML1-204ENST00000398080 ANP32CO43423 234 aa17.48■□□□□ 0.39
SCML1-204ENST00000398080 RBM19Q9Y4C8 960 aaKnown RBP17.47■□□□□ 0.39
SCML1-204ENST00000398080 CADPSQ9ULU8 1353 aa17.47■□□□□ 0.39
SCML1-204ENST00000398080 FOXD1Q16676 465 aa17.47■□□□□ 0.39
SCML1-204ENST00000398080 RRP7BPQ9NSQ0 103 aa17.46■□□□□ 0.39
SCML1-204ENST00000398080 CCDC184Q52MB2 194 aa17.46■□□□□ 0.39
SCML1-204ENST00000398080 AQRO60306 1485 aaKnown RBP eCLIP17.46■□□□□ 0.389e-8■□□□□ 10.6
SCML1-204ENST00000398080 NESP48681 1621 aa17.44■□□□□ 0.38
SCML1-204ENST00000398080 TONSLQ96HA7 1378 aa17.42■□□□□ 0.38
SCML1-204ENST00000398080 HNRNPUQ00839 825 aaKnown RBP eCLIP17.41■□□□□ 0.38
SCML1-204ENST00000398080 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
SCML1-204ENST00000398080 NEFLP07196 543 aa17.4■□□□□ 0.38
SCML1-204ENST00000398080 MSH5O43196 834 aa17.38■□□□□ 0.37
SCML1-204ENST00000398080 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
SCML1-204ENST00000398080 TDRD9Q8NDG6 1382 aaKnown RBP17.38■□□□□ 0.37
SCML1-204ENST00000398080 CCDC18Q5T9S5 1454 aa17.36■□□□□ 0.37
SCML1-204ENST00000398080 MTUS2Q5JR59 1369 aa17.36■□□□□ 0.37
SCML1-204ENST00000398080 CFAP43Q8NDM7 1665 aa17.36■□□□□ 0.37
SCML1-204ENST00000398080 FANCD2Q9BXW9 1451 aa17.35■□□□□ 0.37
SCML1-204ENST00000398080 FGD6Q6ZV73 1430 aa17.35■□□□□ 0.37
SCML1-204ENST00000398080 C11orf95C9JLR9 678 aaPredicted RBP17.34■□□□□ 0.37
SCML1-204ENST00000398080 MAP3K1Q13233 1512 aa17.34■□□□□ 0.37
SCML1-204ENST00000398080 HSPA5P11021 654 aaKnown RBP17.33■□□□□ 0.36
SCML1-204ENST00000398080 WASHC2AQ641Q2 1341 aa17.33■□□□□ 0.36
SCML1-204ENST00000398080 POLA1P09884 1462 aaPredicted RBP17.32■□□□□ 0.36
SCML1-204ENST00000398080 CCER2I3L3R5 266 aa17.31■□□□□ 0.36
SCML1-204ENST00000398080 CASKIN1Q8WXD9 1431 aa17.29■□□□□ 0.36
SCML1-204ENST00000398080 FAM9BQ8IZU0 186 aa17.29■□□□□ 0.36
SCML1-204ENST00000398080 LRRIQ1Q96JM4 1722 aa17.28■□□□□ 0.36
SCML1-204ENST00000398080 NAIPQ13075 1403 aa17.27■□□□□ 0.36
SCML1-204ENST00000398080 PRDM2Q13029 1718 aa17.27■□□□□ 0.35
SCML1-204ENST00000398080 FYCO1Q9BQS8 1478 aa17.27■□□□□ 0.35
SCML1-204ENST00000398080 TOPBP1Q92547 1522 aa17.25■□□□□ 0.35
SCML1-204ENST00000398080 KDM5BQ9UGL1 1544 aa17.25■□□□□ 0.35
SCML1-204ENST00000398080 SNAPC4Q5SXM2 1469 aa17.25■□□□□ 0.35
SCML1-204ENST00000398080 KDM6BO15054 1643 aa17.24■□□□□ 0.35
SCML1-204ENST00000398080 NCOA2Q15596 1464 aa17.24■□□□□ 0.35
SCML1-204ENST00000398080 PTPN23Q9H3S7 1636 aa17.24■□□□□ 0.35
SCML1-204ENST00000398080 CC2D2AQ9P2K1 1620 aa17.24■□□□□ 0.35
SCML1-204ENST00000398080 UACAQ9BZF9 1416 aa17.23■□□□□ 0.35
SCML1-204ENST00000398080 DENND4BO75064 1496 aaPredicted RBP17.22■□□□□ 0.35
SCML1-204ENST00000398080 HFM1A2PYH4 1435 aa17.22■□□□□ 0.35
SCML1-204ENST00000398080 L3MBTL2Q969R5 705 aa17.22■□□□□ 0.35
SCML1-204ENST00000398080 BCL11AQ9H165 835 aa17.22■□□□□ 0.35
SCML1-204ENST00000398080 TIMELESSQ9UNS1 1208 aa17.22■□□□□ 0.35
SCML1-204ENST00000398080 MAGI3Q5TCQ9 1506 aa17.22■□□□□ 0.35
SCML1-204ENST00000398080 B4GALNT3Q6L9W6 998 aa17.21■□□□□ 0.35
SCML1-204ENST00000398080 POLR3GLQ9BT43 218 aa17.21■□□□□ 0.35
SCML1-204ENST00000398080 ABCA10Q8WWZ4 1543 aa17.19■□□□□ 0.34
SCML1-204ENST00000398080 NBPF8Q3BBV2 869 aa17.19■□□□□ 0.34
SCML1-204ENST00000398080 ZNF644Q9H582 1327 aaPredicted RBP17.18■□□□□ 0.34
SCML1-204ENST00000398080 MYOM3Q5VTT5 1437 aa17.17■□□□□ 0.34
SCML1-204ENST00000398080 FMN1Q68DA7 1419 aa17.16■□□□□ 0.34
SCML1-204ENST00000398080 MPHOSPH9Q99550 1183 aa17.15■□□□□ 0.34
SCML1-204ENST00000398080 DNMBPQ6XZF7 1577 aa17.14■□□□□ 0.33
SCML1-204ENST00000398080 URB2Q14146 1524 aaKnown RBP17.14■□□□□ 0.33
SCML1-204ENST00000398080 CTTNBP2Q8WZ74 1663 aa17.14■□□□□ 0.33
SCML1-204ENST00000398080 ZNF326Q5BKZ1 582 aaKnown RBP17.14■□□□□ 0.33
SCML1-204ENST00000398080 MRS2Q9HD23 443 aa17.13■□□□□ 0.33
SCML1-204ENST00000398080 EIF4G2P78344 907 aaKnown RBP eCLIP17.12■□□□□ 0.33
SCML1-204ENST00000398080 EFCAB5A4FU69 1503 aa17.11■□□□□ 0.33
SCML1-204ENST00000398080 CDK13Q14004 1512 aaKnown RBP17.11■□□□□ 0.33
SCML1-204ENST00000398080 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.11■□□□□ 0.33
SCML1-204ENST00000398080 GRIN2BQ13224 1484 aa17.1■□□□□ 0.33
SCML1-204ENST00000398080 PRKRIP1Q9H875 184 aaPredicted RBP17.09■□□□□ 0.33
SCML1-204ENST00000398080 CDK11AQ9UQ88 783 aaPredicted RBP17.08■□□□□ 0.33
SCML1-204ENST00000398080 GAPVD1Q14C86 1478 aa17.06■□□□□ 0.32
SCML1-204ENST00000398080 KIF7Q2M1P5 1343 aa17.04■□□□□ 0.32
SCML1-204ENST00000398080 CCDC7Q96M83 1385 aa17.03■□□□□ 0.32
SCML1-204ENST00000398080 SUPT6HQ7KZ85 1726 aaKnown RBP17.03■□□□□ 0.32
SCML1-204ENST00000398080 UGGT2Q9NYU1 1516 aa17.02■□□□□ 0.32
SCML1-204ENST00000398080 CUL7Q14999 1698 aa17.02■□□□□ 0.32
SCML1-204ENST00000398080 SAMD9Q5K651 1589 aa17.02■□□□□ 0.31
SCML1-204ENST00000398080 CNTLNQ9NXG0 1405 aa17.02■□□□□ 0.31
SCML1-204ENST00000398080 AKNAQ7Z591 1439 aa17.01■□□□□ 0.31
SCML1-204ENST00000398080 SLC4A1APQ9BWU0 796 aaKnown RBP17.01■□□□□ 0.31
SCML1-204ENST00000398080 ZNF777Q9ULD5 760 aaPredicted RBP17■□□□□ 0.31
SCML1-204ENST00000398080 SALL2Q9Y467 1007 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms