RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 HNRNPUQ00839 825 aaKnown RBP eCLIP20.69■□□□□ 0.9
RAPGEF4-201ENST00000397081 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
RAPGEF4-201ENST00000397081 KIF27Q86VH2 1401 aa20.68■□□□□ 0.9
RAPGEF4-201ENST00000397081 CUX2O14529 1486 aa20.68■□□□□ 0.9
RAPGEF4-201ENST00000397081 CCNB3Q8WWL7 1395 aa20.67■□□□□ 0.9
RAPGEF4-201ENST00000397081 ARID3CA6NKF2 412 aa20.67■□□□□ 0.9
RAPGEF4-201ENST00000397081 SENP3-EIF4A1A0A087X0R7 540 aa20.64■□□□□ 0.89
RAPGEF4-201ENST00000397081 CUX1P39880 1505 aa20.62■□□□□ 0.89
RAPGEF4-201ENST00000397081 RAB3GAP2Q9H2M9 1393 aa20.61■□□□□ 0.89
RAPGEF4-201ENST00000397081 KIF21BO75037 1637 aa20.57■□□□□ 0.88
RAPGEF4-201ENST00000397081 RBM19Q9Y4C8 960 aaKnown RBP20.56■□□□□ 0.88
RAPGEF4-201ENST00000397081 TONSLQ96HA7 1378 aa20.56■□□□□ 0.88
RAPGEF4-201ENST00000397081 CHIC2Q9UKJ5 165 aa20.56■□□□□ 0.88
RAPGEF4-201ENST00000397081 CDK11AQ9UQ88 783 aaPredicted RBP20.56■□□□□ 0.88
RAPGEF4-201ENST00000397081 TOP2BQ02880 1626 aa20.55■□□□□ 0.88
RAPGEF4-201ENST00000397081 FGD5Q6ZNL6 1462 aa20.54■□□□□ 0.88
RAPGEF4-201ENST00000397081 FAM9BQ8IZU0 186 aa20.54■□□□□ 0.88
RAPGEF4-201ENST00000397081 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
RAPGEF4-201ENST00000397081 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.88
RAPGEF4-201ENST00000397081 FBLN2P98095 1184 aa20.52■□□□□ 0.88
RAPGEF4-201ENST00000397081 RAD54L2Q9Y4B4 1467 aa20.52■□□□□ 0.88
RAPGEF4-201ENST00000397081 BCL11AQ9H165 835 aa20.48■□□□□ 0.87
RAPGEF4-201ENST00000397081 CARMIL1Q5VZK9 1371 aa20.47■□□□□ 0.87
RAPGEF4-201ENST00000397081 ZNF326Q5BKZ1 582 aaKnown RBP20.46■□□□□ 0.87
RAPGEF4-201ENST00000397081 ERCC6Q03468 1493 aa20.45■□□□□ 0.86
RAPGEF4-201ENST00000397081 ARAP1Q96P48 1450 aa20.43■□□□□ 0.86
RAPGEF4-201ENST00000397081 RRP7BPQ9NSQ0 103 aa20.43■□□□□ 0.86
RAPGEF4-201ENST00000397081 SETD5Q9C0A6 1442 aa20.4■□□□□ 0.86
RAPGEF4-201ENST00000397081 IGF1RP08069 1367 aa20.38■□□□□ 0.85
RAPGEF4-201ENST00000397081 TOPBP1Q92547 1522 aa20.35■□□□□ 0.85
RAPGEF4-201ENST00000397081 PPP1R15AO75807 674 aaPredicted RBP20.35■□□□□ 0.85
RAPGEF4-201ENST00000397081 NBR1Q14596 966 aa20.35■□□□□ 0.85
RAPGEF4-201ENST00000397081 BIVM-ERCC5R4GMW8 1640 aa20.34■□□□□ 0.85
RAPGEF4-201ENST00000397081 POLA1P09884 1462 aaPredicted RBP20.32■□□□□ 0.84
RAPGEF4-201ENST00000397081 B4GALNT3Q6L9W6 998 aa20.32■□□□□ 0.84
RAPGEF4-201ENST00000397081 MRS2Q9HD23 443 aa20.31■□□□□ 0.84
RAPGEF4-201ENST00000397081 MTUS2Q5JR59 1369 aa20.29■□□□□ 0.84
RAPGEF4-201ENST00000397081 FOXD1Q16676 465 aa20.28■□□□□ 0.84
RAPGEF4-201ENST00000397081 PHLDB1Q86UU1 1377 aa20.27■□□□□ 0.84
RAPGEF4-201ENST00000397081 LAMC3Q9Y6N6 1575 aa20.27■□□□□ 0.83
RAPGEF4-201ENST00000397081 SALL2Q9Y467 1007 aaPredicted RBP20.26■□□□□ 0.83
RAPGEF4-201ENST00000397081 PRXQ9BXM0 1461 aa20.26■□□□□ 0.83
RAPGEF4-201ENST00000397081 URB2Q14146 1524 aaKnown RBP20.25■□□□□ 0.83
RAPGEF4-201ENST00000397081 DNMBPQ6XZF7 1577 aa20.24■□□□□ 0.83
RAPGEF4-201ENST00000397081 CCER2I3L3R5 266 aa20.23■□□□□ 0.83
RAPGEF4-201ENST00000397081 RRBP1Q9P2E9 1410 aaKnown RBP20.23■□□□□ 0.83
RAPGEF4-201ENST00000397081 ARHGAP35Q9NRY4 1499 aa20.21■□□□□ 0.83
RAPGEF4-201ENST00000397081 NPM2Q86SE8 214 aaKnown RBP20.2■□□□□ 0.82
RAPGEF4-201ENST00000397081 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
RAPGEF4-201ENST00000397081 AQRO60306 1485 aaKnown RBP eCLIP20.2■□□□□ 0.82
RAPGEF4-201ENST00000397081 FHOD3Q2V2M9 1422 aa20.2■□□□□ 0.82
RAPGEF4-201ENST00000397081 CHMP7Q8WUX9 453 aaPredicted RBP20.19■□□□□ 0.82
RAPGEF4-201ENST00000397081 HSPA5P11021 654 aaKnown RBP20.19■□□□□ 0.82
RAPGEF4-201ENST00000397081 EIF4G2P78344 907 aaKnown RBP eCLIP20.19■□□□□ 0.82
RAPGEF4-201ENST00000397081 GAPVD1Q14C86 1478 aa20.17■□□□□ 0.82
RAPGEF4-201ENST00000397081 ERICH3Q5RHP9 1530 aa20.12■□□□□ 0.81
RAPGEF4-201ENST00000397081 ZNF777Q9ULD5 760 aaPredicted RBP20.12■□□□□ 0.81
RAPGEF4-201ENST00000397081 PRDM2Q13029 1718 aa20.12■□□□□ 0.81
RAPGEF4-201ENST00000397081 RTL5Q5HYW3 569 aaPredicted RBP20.11■□□□□ 0.81
RAPGEF4-201ENST00000397081 MSH5O43196 834 aa20.1■□□□□ 0.81
RAPGEF4-201ENST00000397081 CCDC136Q96JN2 1154 aa20.1■□□□□ 0.81
RAPGEF4-201ENST00000397081 KIF21AQ7Z4S6 1674 aa20.1■□□□□ 0.81
RAPGEF4-201ENST00000397081 MRC2Q9UBG0 1479 aa20.1■□□□□ 0.81
RAPGEF4-201ENST00000397081 CCDC184Q52MB2 194 aa20.09■□□□□ 0.81
RAPGEF4-201ENST00000397081 ABCA10Q8WWZ4 1543 aa20.09■□□□□ 0.81
RAPGEF4-201ENST00000397081 TIMELESSQ9UNS1 1208 aa20.08■□□□□ 0.8
RAPGEF4-201ENST00000397081 PPP4R2Q9NY27 417 aa20.07■□□□□ 0.8
RAPGEF4-201ENST00000397081 FHAD1B1AJZ9 1412 aa20.07■□□□□ 0.8
RAPGEF4-201ENST00000397081 LRRC9Q6ZRR7 1453 aa20.03■□□□□ 0.8
RAPGEF4-201ENST00000397081 SLC4A1APQ9BWU0 796 aaKnown RBP20.02■□□□□ 0.8
RAPGEF4-201ENST00000397081 ANP32AP39687 249 aaKnown RBP20.02■□□□□ 0.79
RAPGEF4-201ENST00000397081 MAPKBP1O60336 1514 aa20.01■□□□□ 0.79
RAPGEF4-201ENST00000397081 L3MBTL2Q969R5 705 aa20.01■□□□□ 0.79
RAPGEF4-201ENST00000397081 KDM2AQ9Y2K7 1162 aa20■□□□□ 0.79
RAPGEF4-201ENST00000397081 WASHC2AQ641Q2 1341 aa19.98■□□□□ 0.79
RAPGEF4-201ENST00000397081 ZNF608Q9ULD9 1512 aaPredicted RBP19.98■□□□□ 0.79
RAPGEF4-201ENST00000397081 TMC1Q8TDI8 760 aa19.97■□□□□ 0.79
RAPGEF4-201ENST00000397081 DEKP35659 375 aaKnown RBP19.97■□□□□ 0.79
RAPGEF4-201ENST00000397081 CCDC18Q5T9S5 1454 aa19.93■□□□□ 0.78
RAPGEF4-201ENST00000397081 MPHOSPH9Q99550 1183 aa19.92■□□□□ 0.78
RAPGEF4-201ENST00000397081 ZBTB47Q9UFB7 747 aaPredicted RBP19.92■□□□□ 0.78
RAPGEF4-201ENST00000397081 NOP58Q9Y2X3 529 aaKnown RBP19.91■□□□□ 0.78
RAPGEF4-201ENST00000397081 PRKRIP1Q9H875 184 aaPredicted RBP19.9■□□□□ 0.78
RAPGEF4-201ENST00000397081 RTN4Q9NQC3 1192 aaKnown RBP19.89■□□□□ 0.78
RAPGEF4-201ENST00000397081 TIAM1Q13009 1591 aa19.89■□□□□ 0.77
RAPGEF4-201ENST00000397081 GRIN2BQ13224 1484 aa19.88■□□□□ 0.77
RAPGEF4-201ENST00000397081 IFT140Q96RY7 1462 aa19.87■□□□□ 0.77
RAPGEF4-201ENST00000397081 C11orf95C9JLR9 678 aaPredicted RBP19.86■□□□□ 0.77
RAPGEF4-201ENST00000397081 LAS1LQ9Y4W2 734 aaKnown RBP19.86■□□□□ 0.77
RAPGEF4-201ENST00000397081 FGD6Q6ZV73 1430 aa19.84■□□□□ 0.77
RAPGEF4-201ENST00000397081 DAXXQ9UER7 740 aaPredicted RBP19.83■□□□□ 0.77
RAPGEF4-201ENST00000397081 SNAPC4Q5SXM2 1469 aa19.83■□□□□ 0.76
RAPGEF4-201ENST00000397081 FANCIQ9NVI1 1328 aa19.83■□□□□ 0.76
RAPGEF4-201ENST00000397081 PAK3O75914 559 aaPredicted RBP19.81■□□□□ 0.76
RAPGEF4-201ENST00000397081 FMN1Q68DA7 1419 aa19.8■□□□□ 0.76
RAPGEF4-201ENST00000397081 CUL7Q14999 1698 aa19.79■□□□□ 0.76
RAPGEF4-201ENST00000397081 UACAQ9BZF9 1416 aa19.77■□□□□ 0.75
RAPGEF4-201ENST00000397081 NBPF8Q3BBV2 869 aa19.75■□□□□ 0.75
RAPGEF4-201ENST00000397081 JPH4Q96JJ6 628 aa19.75■□□□□ 0.75
RAPGEF4-201ENST00000397081 RGL3Q3MIN7 710 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms