RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 CUX2O14529 1486 aa20.71■□□□□ 0.91
CCNF-202ENST00000397066 CUX1P39880 1505 aa20.7■□□□□ 0.9
CCNF-202ENST00000397066 BIVM-ERCC5R4GMW8 1640 aa20.69■□□□□ 0.9
CCNF-202ENST00000397066 CARMIL1Q5VZK9 1371 aa20.66■□□□□ 0.9
CCNF-202ENST00000397066 TONSLQ96HA7 1378 aa20.66■□□□□ 0.9
CCNF-202ENST00000397066 PHLDB1Q86UU1 1377 aa20.63■□□□□ 0.89
CCNF-202ENST00000397066 IGF1RP08069 1367 aa20.61■□□□□ 0.89
CCNF-202ENST00000397066 PPP1R15AO75807 674 aaPredicted RBP20.61■□□□□ 0.89
CCNF-202ENST00000397066 ERICH6Q7L0X2 663 aa20.61■□□□□ 0.89
CCNF-202ENST00000397066 TIMELESSQ9UNS1 1208 aa20.61■□□□□ 0.89
CCNF-202ENST00000397066 CCER2I3L3R5 266 aa20.59■□□□□ 0.89
CCNF-202ENST00000397066 MAPKBP1O60336 1514 aa20.59■□□□□ 0.89
CCNF-202ENST00000397066 WDR97A6NE52 1622 aa20.59■□□□□ 0.89
CCNF-202ENST00000397066 RBM19Q9Y4C8 960 aaKnown RBP20.59■□□□□ 0.89
CCNF-202ENST00000397066 FHAD1B1AJZ9 1412 aa20.58■□□□□ 0.88
CCNF-202ENST00000397066 LRRC9Q6ZRR7 1453 aa20.57■□□□□ 0.88
CCNF-202ENST00000397066 HNRNPUQ00839 825 aaKnown RBP eCLIP20.57■□□□□ 0.88
CCNF-202ENST00000397066 TIAM1Q13009 1591 aa20.55■□□□□ 0.88
CCNF-202ENST00000397066 NCAPD3P42695 1498 aa20.54■□□□□ 0.88
CCNF-202ENST00000397066 IRX6P78412 446 aaPredicted RBP20.54■□□□□ 0.88
CCNF-202ENST00000397066 CFTRP13569 1480 aa20.52■□□□□ 0.87
CCNF-202ENST00000397066 CDK11AQ9UQ88 783 aaPredicted RBP20.5■□□□□ 0.87
CCNF-202ENST00000397066 FHOD3Q2V2M9 1422 aa20.47■□□□□ 0.87
CCNF-202ENST00000397066 MTUS2Q5JR59 1369 aa20.46■□□□□ 0.87
CCNF-202ENST00000397066 HMGXB3Q12766 1538 aa20.45■□□□□ 0.86
CCNF-202ENST00000397066 MAP3K1Q13233 1512 aa20.41■□□□□ 0.86
CCNF-202ENST00000397066 FGD5Q6ZNL6 1462 aa20.41■□□□□ 0.86
CCNF-202ENST00000397066 CHIC2Q9UKJ5 165 aa20.4■□□□□ 0.86
CCNF-202ENST00000397066 BCL11AQ9H165 835 aa20.39■□□□□ 0.85
CCNF-202ENST00000397066 CADPSQ9ULU8 1353 aa20.38■□□□□ 0.85
CCNF-202ENST00000397066 RRP7BPQ9NSQ0 103 aa20.37■□□□□ 0.85
CCNF-202ENST00000397066 CNGB1Q14028 1251 aaPredicted RBP20.36■□□□□ 0.85
CCNF-202ENST00000397066 FAM9BQ8IZU0 186 aa20.34■□□□□ 0.85
CCNF-202ENST00000397066 CCDC18Q5T9S5 1454 aa20.33■□□□□ 0.84
CCNF-202ENST00000397066 PCF11O94913 1555 aaKnown RBP20.32■□□□□ 0.84
CCNF-202ENST00000397066 HSPA5P11021 654 aaKnown RBP20.3■□□□□ 0.84
CCNF-202ENST00000397066 EIF4G2P78344 907 aaKnown RBP eCLIP20.3■□□□□ 0.84
CCNF-202ENST00000397066 FGD6Q6ZV73 1430 aa20.3■□□□□ 0.84
CCNF-202ENST00000397066 ARID3CA6NKF2 412 aa20.28■□□□□ 0.84
CCNF-202ENST00000397066 POLR3GLQ9BT43 218 aa20.28■□□□□ 0.84
CCNF-202ENST00000397066 CASKIN1Q8WXD9 1431 aa20.26■□□□□ 0.83
CCNF-202ENST00000397066 FMN1Q68DA7 1419 aa20.26■□□□□ 0.83
CCNF-202ENST00000397066 MRS2Q9HD23 443 aa20.26■□□□□ 0.83
CCNF-202ENST00000397066 FYCO1Q9BQS8 1478 aa20.25■□□□□ 0.83
CCNF-202ENST00000397066 UACAQ9BZF9 1416 aa20.25■□□□□ 0.83
CCNF-202ENST00000397066 RAD54L2Q9Y4B4 1467 aa20.24■□□□□ 0.83
CCNF-202ENST00000397066 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.22■□□□□ 0.83
CCNF-202ENST00000397066 PPP4R2Q9NY27 417 aa20.21■□□□□ 0.83
CCNF-202ENST00000397066 WASHC2AQ641Q2 1341 aa20.19■□□□□ 0.82
CCNF-202ENST00000397066 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
CCNF-202ENST00000397066 MSH5O43196 834 aa20.18■□□□□ 0.82
CCNF-202ENST00000397066 HFM1A2PYH4 1435 aa20.18■□□□□ 0.82
CCNF-202ENST00000397066 B4GALNT3Q6L9W6 998 aa20.18■□□□□ 0.82
CCNF-202ENST00000397066 CFAP43Q8NDM7 1665 aa20.17■□□□□ 0.82
CCNF-202ENST00000397066 FOXD1Q16676 465 aa20.17■□□□□ 0.82
CCNF-202ENST00000397066 PTPRKQ15262 1439 aa20.14■□□□□ 0.81
CCNF-202ENST00000397066 EFCAB5A4FU69 1503 aa20.14■□□□□ 0.81
CCNF-202ENST00000397066 FANCIQ9NVI1 1328 aa20.13■□□□□ 0.81
CCNF-202ENST00000397066 ZNF326Q5BKZ1 582 aaKnown RBP20.13■□□□□ 0.81
CCNF-202ENST00000397066 NAIPQ13075 1403 aa20.12■□□□□ 0.81
CCNF-202ENST00000397066 MYOM3Q5VTT5 1437 aa20.12■□□□□ 0.81
CCNF-202ENST00000397066 L3MBTL2Q969R5 705 aa20.12■□□□□ 0.81
CCNF-202ENST00000397066 NCOA2Q15596 1464 aa20.12■□□□□ 0.81
CCNF-202ENST00000397066 CCDC184Q52MB2 194 aa20.11■□□□□ 0.81
CCNF-202ENST00000397066 TDRD9Q8NDG6 1382 aaKnown RBP20.11■□□□□ 0.81
CCNF-202ENST00000397066 MPHOSPH9Q99550 1183 aa20.11■□□□□ 0.81
CCNF-202ENST00000397066 ERICH6BQ5W0A0 696 aa20.1■□□□□ 0.81
CCNF-202ENST00000397066 AQRO60306 1485 aaKnown RBP eCLIP20.1■□□□□ 0.813e-7■■■■□ 21.3
CCNF-202ENST00000397066 PRKRIP1Q9H875 184 aaPredicted RBP20.08■□□□□ 0.81
CCNF-202ENST00000397066 PTPN23Q9H3S7 1636 aa20.07■□□□□ 0.8
CCNF-202ENST00000397066 SENP3-EIF4A1A0A087X0R7 540 aa20.06■□□□□ 0.8
CCNF-202ENST00000397066 POLA1P09884 1462 aaPredicted RBP20.05■□□□□ 0.8
CCNF-202ENST00000397066 SLC4A1APQ9BWU0 796 aaKnown RBP20.04■□□□□ 0.8
CCNF-202ENST00000397066 CNTLNQ9NXG0 1405 aa20.03■□□□□ 0.8
CCNF-202ENST00000397066 ABCA10Q8WWZ4 1543 aa20.02■□□□□ 0.8
CCNF-202ENST00000397066 NBR1Q14596 966 aa20.01■□□□□ 0.79
CCNF-202ENST00000397066 CCDC136Q96JN2 1154 aa20■□□□□ 0.79
CCNF-202ENST00000397066 TOPBP1Q92547 1522 aa20■□□□□ 0.79
CCNF-202ENST00000397066 C11orf95C9JLR9 678 aaPredicted RBP20■□□□□ 0.79
CCNF-202ENST00000397066 CCDC7Q96M83 1385 aa19.99■□□□□ 0.79
CCNF-202ENST00000397066 ZBED9Q6R2W3 1325 aa19.99■□□□□ 0.79
CCNF-202ENST00000397066 PRDM2Q13029 1718 aa19.98■□□□□ 0.79
CCNF-202ENST00000397066 DNMBPQ6XZF7 1577 aa19.97■□□□□ 0.79
CCNF-202ENST00000397066 SNAPC4Q5SXM2 1469 aa19.96■□□□□ 0.79
CCNF-202ENST00000397066 MYT1LQ9UL68 1186 aa19.96■□□□□ 0.79
CCNF-202ENST00000397066 ANP32AP39687 249 aaKnown RBP19.95■□□□□ 0.78
CCNF-202ENST00000397066 NESP48681 1621 aa19.94■□□□□ 0.78
CCNF-202ENST00000397066 NOP58Q9Y2X3 529 aaKnown RBP19.93■□□□□ 0.78
CCNF-202ENST00000397066 SUPT6HQ7KZ85 1726 aaKnown RBP19.93■□□□□ 0.78
CCNF-202ENST00000397066 EHBP1L1Q8N3D4 1523 aa19.92■□□□□ 0.78
CCNF-202ENST00000397066 NBPF8Q3BBV2 869 aa19.92■□□□□ 0.78
CCNF-202ENST00000397066 CUL7Q14999 1698 aa19.92■□□□□ 0.78
CCNF-202ENST00000397066 KIF7Q2M1P5 1343 aa19.92■□□□□ 0.78
CCNF-202ENST00000397066 ZNF777Q9ULD5 760 aaPredicted RBP19.92■□□□□ 0.78
CCNF-202ENST00000397066 RTL5Q5HYW3 569 aaPredicted RBP19.91■□□□□ 0.78
CCNF-202ENST00000397066 TMC1Q8TDI8 760 aa19.91■□□□□ 0.78
CCNF-202ENST00000397066 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
CCNF-202ENST00000397066 DEKP35659 375 aaKnown RBP19.9■□□□□ 0.78
CCNF-202ENST00000397066 GAPVD1Q14C86 1478 aa19.9■□□□□ 0.78
CCNF-202ENST00000397066 CTTNBP2Q8WZ74 1663 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms