RNA–Protein interactions for RNA: ENST00000397033.6

ITGA4-203, Transcript of integrin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA4, Length 4,189 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-203ENST00000397033 ANP32CO43423 234 aa17.08■□□□□ 0.32
ITGA4-203ENST00000397033 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
ITGA4-203ENST00000397033 TONSLQ96HA7 1378 aa17.04■□□□□ 0.32
ITGA4-203ENST00000397033 DNAJC5BQ9UF47 199 aa17.04■□□□□ 0.32
ITGA4-203ENST00000397033 BCL11AQ9H165 835 aa17.02■□□□□ 0.31
ITGA4-203ENST00000397033 CCNB3Q8WWL7 1395 aa16.99■□□□□ 0.31
ITGA4-203ENST00000397033 CLSPNQ9HAW4 1339 aa16.98■□□□□ 0.31
ITGA4-203ENST00000397033 ERCC6Q03468 1493 aa16.98■□□□□ 0.31
ITGA4-203ENST00000397033 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.97■□□□□ 0.31
ITGA4-203ENST00000397033 SLC4A1APQ9BWU0 796 aaKnown RBP16.96■□□□□ 0.31
ITGA4-203ENST00000397033 TSHZ2Q9NRE2 1034 aa16.96■□□□□ 0.31
ITGA4-203ENST00000397033 PDS5BQ9NTI5 1447 aa16.96■□□□□ 0.31
ITGA4-203ENST00000397033 FOXD1Q16676 465 aa16.96■□□□□ 0.3
ITGA4-203ENST00000397033 CDK11AQ9UQ88 783 aaPredicted RBP16.95■□□□□ 0.3
ITGA4-203ENST00000397033 KDM2AQ9Y2K7 1162 aa16.95■□□□□ 0.3
ITGA4-203ENST00000397033 SENP3Q9H4L4 574 aaPredicted RBP16.93■□□□□ 0.3
ITGA4-203ENST00000397033 KCNH8Q96L42 1107 aa16.92■□□□□ 0.3
ITGA4-203ENST00000397033 SYNJ1O43426 1573 aa16.92■□□□□ 0.3
ITGA4-203ENST00000397033 FHOD3Q2V2M9 1422 aa16.92■□□□□ 0.3
ITGA4-203ENST00000397033 CC2D2AQ9P2K1 1620 aa16.92■□□□□ 0.3
ITGA4-203ENST00000397033 FAM9BQ8IZU0 186 aa16.9■□□□□ 0.3
ITGA4-203ENST00000397033 IRX6P78412 446 aaPredicted RBP16.9■□□□□ 0.3
ITGA4-203ENST00000397033 FANCD2Q9BXW9 1451 aa16.9■□□□□ 0.3
ITGA4-203ENST00000397033 SALL2Q9Y467 1007 aaPredicted RBP16.89■□□□□ 0.29
ITGA4-203ENST00000397033 HNRNPUQ00839 825 aaKnown RBP eCLIP16.88■□□□□ 0.29
ITGA4-203ENST00000397033 RAD54L2Q9Y4B4 1467 aa16.87■□□□□ 0.29
ITGA4-203ENST00000397033 IGF1RP08069 1367 aa16.86■□□□□ 0.29
ITGA4-203ENST00000397033 HMGXB3Q12766 1538 aa16.85■□□□□ 0.29
ITGA4-203ENST00000397033 RAB3GAP2Q9H2M9 1393 aa16.85■□□□□ 0.29
ITGA4-203ENST00000397033 CFTRP13569 1480 aa16.82■□□□□ 0.28
ITGA4-203ENST00000397033 RGL3Q3MIN7 710 aa16.81■□□□□ 0.28
ITGA4-203ENST00000397033 CFDP1Q9UEE9 299 aaPredicted RBP16.81■□□□□ 0.28
ITGA4-203ENST00000397033 NESP48681 1621 aa16.8■□□□□ 0.28
ITGA4-203ENST00000397033 PEG3Q9GZU2 1588 aa16.79■□□□□ 0.28
ITGA4-203ENST00000397033 TSPY4P0CV99 314 aa16.77■□□□□ 0.27
ITGA4-203ENST00000397033 TSPY10P0CW01 314 aa16.77■□□□□ 0.27
ITGA4-203ENST00000397033 FGD5Q6ZNL6 1462 aa16.77■□□□□ 0.27
ITGA4-203ENST00000397033 RBM19Q9Y4C8 960 aaKnown RBP16.77■□□□□ 0.27
ITGA4-203ENST00000397033 PLEKHD1A6NEE1 506 aa16.74■□□□□ 0.27
ITGA4-203ENST00000397033 FHAD1B1AJZ9 1412 aa16.74■□□□□ 0.27
ITGA4-203ENST00000397033 ARAP1Q96P48 1450 aa16.74■□□□□ 0.27
ITGA4-203ENST00000397033 DHX57Q6P158 1386 aaKnown RBP16.74■□□□□ 0.27
ITGA4-203ENST00000397033 KIF21BO75037 1637 aa16.73■□□□□ 0.27
ITGA4-203ENST00000397033 NBR1Q14596 966 aa16.73■□□□□ 0.27
ITGA4-203ENST00000397033 RTL5Q5HYW3 569 aaPredicted RBP16.73■□□□□ 0.27
ITGA4-203ENST00000397033 CHGAP10645 457 aaKnown RBP16.73■□□□□ 0.27
ITGA4-203ENST00000397033 SETD5Q9C0A6 1442 aa16.72■□□□□ 0.27
ITGA4-203ENST00000397033 MRS2Q9HD23 443 aa16.7■□□□□ 0.26
ITGA4-203ENST00000397033 EIF4G2P78344 907 aaKnown RBP eCLIP16.7■□□□□ 0.26
ITGA4-203ENST00000397033 CUX1P39880 1505 aa16.67■□□□□ 0.26
ITGA4-203ENST00000397033 PHLDB1Q86UU1 1377 aa16.65■□□□□ 0.26
ITGA4-203ENST00000397033 ARHGAP35Q9NRY4 1499 aa16.65■□□□□ 0.26
ITGA4-203ENST00000397033 PLPPR3Q6T4P5 718 aa16.62■□□□□ 0.25
ITGA4-203ENST00000397033 AQRO60306 1485 aaKnown RBP eCLIP16.61■□□□□ 0.25
ITGA4-203ENST00000397033 ZNF644Q9H582 1327 aaPredicted RBP16.61■□□□□ 0.25
ITGA4-203ENST00000397033 PPP1R15AO75807 674 aaPredicted RBP16.59■□□□□ 0.25
ITGA4-203ENST00000397033 TOP2BQ02880 1626 aa16.58■□□□□ 0.24
ITGA4-203ENST00000397033 PRXQ9BXM0 1461 aa16.58■□□□□ 0.24
ITGA4-203ENST00000397033 HSPA5P11021 654 aaKnown RBP16.57■□□□□ 0.24
ITGA4-203ENST00000397033 TMC1Q8TDI8 760 aa16.57■□□□□ 0.24
ITGA4-203ENST00000397033 MPHOSPH9Q99550 1183 aa16.57■□□□□ 0.24
ITGA4-203ENST00000397033 NPM2Q86SE8 214 aaKnown RBP16.56■□□□□ 0.24
ITGA4-203ENST00000397033 FMN1Q68DA7 1419 aa16.55■□□□□ 0.24
ITGA4-203ENST00000397033 L3MBTL2Q969R5 705 aa16.55■□□□□ 0.24
ITGA4-203ENST00000397033 PKD2Q13563 968 aa16.54■□□□□ 0.24
ITGA4-203ENST00000397033 GAPVD1Q14C86 1478 aa16.53■□□□□ 0.24
ITGA4-203ENST00000397033 HNRNPMP52272 730 aaKnown RBP eCLIP16.53■□□□□ 0.24
ITGA4-203ENST00000397033 JPH4Q96JJ6 628 aa16.53■□□□□ 0.24
ITGA4-203ENST00000397033 TOPBP1Q92547 1522 aa16.53■□□□□ 0.24
ITGA4-203ENST00000397033 DCAF11Q8TEB1 546 aa16.52■□□□□ 0.24
ITGA4-203ENST00000397033 CARD11Q9BXL7 1154 aa16.52■□□□□ 0.24
ITGA4-203ENST00000397033 POLA1P09884 1462 aaPredicted RBP16.5■□□□□ 0.23
ITGA4-203ENST00000397033 ANP32AP39687 249 aaKnown RBP16.49■□□□□ 0.23
ITGA4-203ENST00000397033 NPM1P06748 294 aaKnown RBP eCLIP16.48■□□□□ 0.23
ITGA4-203ENST00000397033 DAXXQ9UER7 740 aaPredicted RBP16.48■□□□□ 0.23
ITGA4-203ENST00000397033 B4GALNT3Q6L9W6 998 aa16.47■□□□□ 0.23
ITGA4-203ENST00000397033 DEKP35659 375 aaKnown RBP16.45■□□□□ 0.22
ITGA4-203ENST00000397033 LRRC9Q6ZRR7 1453 aa16.43■□□□□ 0.22
ITGA4-203ENST00000397033 RTN4Q9NQC3 1192 aaKnown RBP16.42■□□□□ 0.22
ITGA4-203ENST00000397033 LAMC3Q9Y6N6 1575 aa16.42■□□□□ 0.22
ITGA4-203ENST00000397033 DNMBPQ6XZF7 1577 aa16.41■□□□□ 0.22
ITGA4-203ENST00000397033 CCDC136Q96JN2 1154 aa16.4■□□□□ 0.22
ITGA4-203ENST00000397033 MRC2Q9UBG0 1479 aa16.4■□□□□ 0.22
ITGA4-203ENST00000397033 CC2D1BQ5T0F9 858 aaKnown RBP16.39■□□□□ 0.21
ITGA4-203ENST00000397033 ZBTB47Q9UFB7 747 aaPredicted RBP16.39■□□□□ 0.21
ITGA4-203ENST00000397033 NUP155O75694 1391 aa16.39■□□□□ 0.21
ITGA4-203ENST00000397033 EIF5BO60841 1220 aaKnown RBP16.38■□□□□ 0.21
ITGA4-203ENST00000397033 FGD6Q6ZV73 1430 aa16.36■□□□□ 0.21
ITGA4-203ENST00000397033 ERICH3Q5RHP9 1530 aa16.36■□□□□ 0.21
ITGA4-203ENST00000397033 CARMIL2Q6F5E8 1435 aa16.35■□□□□ 0.21
ITGA4-203ENST00000397033 TNNT2P45379 298 aaPredicted RBP16.34■□□□□ 0.21
ITGA4-203ENST00000397033 PPP4R2Q9NY27 417 aa16.34■□□□□ 0.21
ITGA4-203ENST00000397033 STAG3Q9UJ98 1225 aa16.34■□□□□ 0.21
ITGA4-203ENST00000397033 CCDC18Q5T9S5 1454 aa16.34■□□□□ 0.21
ITGA4-203ENST00000397033 URB2Q14146 1524 aaKnown RBP16.33■□□□□ 0.21
ITGA4-203ENST00000397033 TIMELESSQ9UNS1 1208 aa16.33■□□□□ 0.21
ITGA4-203ENST00000397033 RRBP1Q9P2E9 1410 aaKnown RBP16.32■□□□□ 0.2
ITGA4-203ENST00000397033 CCER2I3L3R5 266 aa16.31■□□□□ 0.2
ITGA4-203ENST00000397033 NOP58Q9Y2X3 529 aaKnown RBP16.31■□□□□ 0.2
ITGA4-203ENST00000397033 GRIN2BQ13224 1484 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms