RNA–Protein interactions for RNA: ENST00000396280.9

TRPM3-211, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRPM3, Length 4,671 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-211ENST00000396280 ARID3CA6NKF2 412 aa13.01□□□□□ -0.33
TRPM3-211ENST00000396280 CCER2I3L3R5 266 aa12.99□□□□□ -0.33
TRPM3-211ENST00000396280 EIF4G2P78344 907 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRPM3-211ENST00000396280 FAM9BQ8IZU0 186 aa12.98□□□□□ -0.33
TRPM3-211ENST00000396280 SYNJ1O43426 1573 aa12.98□□□□□ -0.33
TRPM3-211ENST00000396280 RTL5Q5HYW3 569 aaPredicted RBP12.98□□□□□ -0.33
TRPM3-211ENST00000396280 RRP7BPQ9NSQ0 103 aa12.96□□□□□ -0.33
TRPM3-211ENST00000396280 MRS2Q9HD23 443 aa12.95□□□□□ -0.34
TRPM3-211ENST00000396280 DAXXQ9UER7 740 aaPredicted RBP12.94□□□□□ -0.34
TRPM3-211ENST00000396280 TSHZ2Q9NRE2 1034 aa12.94□□□□□ -0.34
TRPM3-211ENST00000396280 IRX6P78412 446 aaPredicted RBP12.93□□□□□ -0.34
TRPM3-211ENST00000396280 ARHGAP35Q9NRY4 1499 aa12.93□□□□□ -0.34
TRPM3-211ENST00000396280 PPP1R15AO75807 674 aaPredicted RBP12.93□□□□□ -0.34
TRPM3-211ENST00000396280 EIF4G1Q04637 1599 aaKnown RBP12.91□□□□□ -0.34
TRPM3-211ENST00000396280 ERICH3Q5RHP9 1530 aa12.91□□□□□ -0.34
TRPM3-211ENST00000396280 ZNF777Q9ULD5 760 aaPredicted RBP12.89□□□□□ -0.35
TRPM3-211ENST00000396280 ANP32AP39687 249 aaKnown RBP12.88□□□□□ -0.35
TRPM3-211ENST00000396280 KCNH8Q96L42 1107 aa12.88□□□□□ -0.35
TRPM3-211ENST00000396280 RRBP1Q9P2E9 1410 aaKnown RBP12.88□□□□□ -0.35
TRPM3-211ENST00000396280 PRXQ9BXM0 1461 aa12.87□□□□□ -0.35
TRPM3-211ENST00000396280 MYT1LQ9UL68 1186 aa12.86□□□□□ -0.35
TRPM3-211ENST00000396280 ARAP1Q96P48 1450 aa12.86□□□□□ -0.35
TRPM3-211ENST00000396280 SLC4A1APQ9BWU0 796 aaKnown RBP12.85□□□□□ -0.35
TRPM3-211ENST00000396280 CADPSQ9ULU8 1353 aa12.84□□□□□ -0.35
TRPM3-211ENST00000396280 TOP2BQ02880 1626 aa12.84□□□□□ -0.35
TRPM3-211ENST00000396280 RBM19Q9Y4C8 960 aaKnown RBP12.84□□□□□ -0.35
TRPM3-211ENST00000396280 IGF1RP08069 1367 aa12.84□□□□□ -0.35
TRPM3-211ENST00000396280 FMN1Q68DA7 1419 aa12.83□□□□□ -0.36
TRPM3-211ENST00000396280 FBLN2P98095 1184 aa12.83□□□□□ -0.36
TRPM3-211ENST00000396280 TMC1Q8TDI8 760 aa12.83□□□□□ -0.36
TRPM3-211ENST00000396280 CCDC136Q96JN2 1154 aa12.83□□□□□ -0.36
TRPM3-211ENST00000396280 PPP4R2Q9NY27 417 aa12.83□□□□□ -0.36
TRPM3-211ENST00000396280 FHOD3Q2V2M9 1422 aa12.81□□□□□ -0.36
TRPM3-211ENST00000396280 HSPA5P11021 654 aaKnown RBP12.8□□□□□ -0.36
TRPM3-211ENST00000396280 NCAPD3P42695 1498 aa12.8□□□□□ -0.36
TRPM3-211ENST00000396280 PHLDB1Q86UU1 1377 aa12.77□□□□□ -0.37
TRPM3-211ENST00000396280 LRRC9Q6ZRR7 1453 aa12.77□□□□□ -0.37
TRPM3-211ENST00000396280 ERICH6BQ5W0A0 696 aa12.77□□□□□ -0.37
TRPM3-211ENST00000396280 PEG3Q9GZU2 1588 aa12.77□□□□□ -0.37
TRPM3-211ENST00000396280 BICRAQ9NZM4 1560 aa12.75□□□□□ -0.37
TRPM3-211ENST00000396280 NPM2Q86SE8 214 aaKnown RBP12.74□□□□□ -0.37
TRPM3-211ENST00000396280 ZBTB47Q9UFB7 747 aaPredicted RBP12.73□□□□□ -0.37
TRPM3-211ENST00000396280 TSPY4P0CV99 314 aa12.73□□□□□ -0.37
TRPM3-211ENST00000396280 TSPY10P0CW01 314 aa12.73□□□□□ -0.37
TRPM3-211ENST00000396280 CFTRP13569 1480 aa12.73□□□□□ -0.37
TRPM3-211ENST00000396280 CUX1P39880 1505 aa12.72□□□□□ -0.37
TRPM3-211ENST00000396280 FGD5Q6ZNL6 1462 aa12.72□□□□□ -0.37
TRPM3-211ENST00000396280 KDM2AQ9Y2K7 1162 aa12.72□□□□□ -0.37
TRPM3-211ENST00000396280 MPHOSPH9Q99550 1183 aa12.71□□□□□ -0.37
TRPM3-211ENST00000396280 SALL2Q9Y467 1007 aaPredicted RBP12.71□□□□□ -0.37
TRPM3-211ENST00000396280 CFDP1Q9UEE9 299 aaPredicted RBP12.71□□□□□ -0.38
TRPM3-211ENST00000396280 CCDC18Q5T9S5 1454 aa12.7□□□□□ -0.38
TRPM3-211ENST00000396280 B4GALNT3Q6L9W6 998 aa12.7□□□□□ -0.38
TRPM3-211ENST00000396280 TDRD9Q8NDG6 1382 aaKnown RBP12.7□□□□□ -0.38
TRPM3-211ENST00000396280 NBR1Q14596 966 aa12.7□□□□□ -0.38
TRPM3-211ENST00000396280 L3MBTL2Q969R5 705 aa12.68□□□□□ -0.38
TRPM3-211ENST00000396280 FGD6Q6ZV73 1430 aa12.67□□□□□ -0.38
TRPM3-211ENST00000396280 FANCD2Q9BXW9 1451 aa12.67□□□□□ -0.38
TRPM3-211ENST00000396280 TIAM1Q13009 1591 aa12.67□□□□□ -0.38
TRPM3-211ENST00000396280 UNC13AQ9UPW8 1703 aa12.67□□□□□ -0.38
TRPM3-211ENST00000396280 HMGXB3Q12766 1538 aa12.67□□□□□ -0.38
TRPM3-211ENST00000396280 FOXD1Q16676 465 aa12.67□□□□□ -0.38
TRPM3-211ENST00000396280 CHMP7Q8WUX9 453 aaPredicted RBP12.65□□□□□ -0.38
TRPM3-211ENST00000396280 CARD11Q9BXL7 1154 aa12.65□□□□□ -0.38
TRPM3-211ENST00000396280 UACAQ9BZF9 1416 aa12.65□□□□□ -0.38
TRPM3-211ENST00000396280 CASKIN1Q8WXD9 1431 aa12.65□□□□□ -0.38
TRPM3-211ENST00000396280 PLEKHD1A6NEE1 506 aa12.64□□□□□ -0.39
TRPM3-211ENST00000396280 BIVM-ERCC5R4GMW8 1640 aa12.62□□□□□ -0.39
TRPM3-211ENST00000396280 NOP58Q9Y2X3 529 aaKnown RBP12.62□□□□□ -0.39
TRPM3-211ENST00000396280 FYCO1Q9BQS8 1478 aa12.62□□□□□ -0.39
TRPM3-211ENST00000396280 SENP3-EIF4A1A0A087X0R7 540 aa12.62□□□□□ -0.39
TRPM3-211ENST00000396280 BCL11AQ9H165 835 aa12.62□□□□□ -0.39
TRPM3-211ENST00000396280 WDR97A6NE52 1622 aa12.61□□□□□ -0.39
TRPM3-211ENST00000396280 MAP3K1Q13233 1512 aa12.61□□□□□ -0.39
TRPM3-211ENST00000396280 PDS5BQ9NTI5 1447 aa12.61□□□□□ -0.39
TRPM3-211ENST00000396280 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRPM3-211ENST00000396280 MYOM3Q5VTT5 1437 aa12.6□□□□□ -0.39
TRPM3-211ENST00000396280 RAD54L2Q9Y4B4 1467 aa12.6□□□□□ -0.39
TRPM3-211ENST00000396280 PRKRIP1Q9H875 184 aaPredicted RBP12.6□□□□□ -0.39
TRPM3-211ENST00000396280 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRPM3-211ENST00000396280 CANXP27824 592 aaKnown RBP12.59□□□□□ -0.39
TRPM3-211ENST00000396280 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.58□□□□□ -0.4
TRPM3-211ENST00000396280 PKD2Q13563 968 aa12.57□□□□□ -0.4
TRPM3-211ENST00000396280 WDR43Q15061 677 aaKnown RBP eCLIP12.57□□□□□ -0.4
TRPM3-211ENST00000396280 EFCAB5A4FU69 1503 aa12.56□□□□□ -0.4
TRPM3-211ENST00000396280 FANCIQ9NVI1 1328 aa12.56□□□□□ -0.4
TRPM3-211ENST00000396280 ZBED9Q6R2W3 1325 aa12.55□□□□□ -0.4
TRPM3-211ENST00000396280 RGL3Q3MIN7 710 aa12.55□□□□□ -0.4
TRPM3-211ENST00000396280 NCOA2Q15596 1464 aa12.55□□□□□ -0.4
TRPM3-211ENST00000396280 NUDCQ9Y266 331 aa12.55□□□□□ -0.4
TRPM3-211ENST00000396280 HFM1A2PYH4 1435 aa12.54□□□□□ -0.4
TRPM3-211ENST00000396280 WASHC2AQ641Q2 1341 aa12.54□□□□□ -0.4
TRPM3-211ENST00000396280 DCAF11Q8TEB1 546 aa12.53□□□□□ -0.4
TRPM3-211ENST00000396280 GAPVD1Q14C86 1478 aa12.52□□□□□ -0.41
TRPM3-211ENST00000396280 DDRGK1Q96HY6 314 aa12.52□□□□□ -0.41
TRPM3-211ENST00000396280 CNTLNQ9NXG0 1405 aa12.52□□□□□ -0.41
TRPM3-211ENST00000396280 CCDC7Q96M83 1385 aa12.52□□□□□ -0.41
TRPM3-211ENST00000396280 ANKRD30AQ9BXX3 1397 aa12.5□□□□□ -0.41
TRPM3-211ENST00000396280 MAPKBP1O60336 1514 aa12.5□□□□□ -0.41
TRPM3-211ENST00000396280 DEKP35659 375 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms