RNA–Protein interactions for RNA: ENST00000395981.7

BDNF-205, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-205ENST00000395981 CEP164Q9UPV0 1460 aa9.12□□□□□ -0.95
BDNF-205ENST00000395981 PDIA4P13667 645 aaKnown RBP9.12□□□□□ -0.95
BDNF-205ENST00000395981 CUX1P39880 1505 aa9.11□□□□□ -0.95
BDNF-205ENST00000395981 CDK11BP21127 795 aaKnown RBP9.11□□□□□ -0.95
BDNF-205ENST00000395981 CDK11AQ9UQ88 783 aaPredicted RBP9.11□□□□□ -0.95
BDNF-205ENST00000395981 TARBP1Q13395 1621 aaKnown RBP9.11□□□□□ -0.95
BDNF-205ENST00000395981 TOPBP1Q92547 1522 aa9.1□□□□□ -0.95
BDNF-205ENST00000395981 PHF23Q9BUL5 403 aaPredicted RBP9.09□□□□□ -0.95
BDNF-205ENST00000395981 NEFLP07196 543 aa9.09□□□□□ -0.95
BDNF-205ENST00000395981 HNRNPUL2Q1KMD3 747 aaKnown RBP9.09□□□□□ -0.95
BDNF-205ENST00000395981 ZNF316A6NFI3 1004 aaPredicted RBP9.08□□□□□ -0.96
BDNF-205ENST00000395981 ATP1B4Q9UN42 357 aaPredicted RBP9.08□□□□□ -0.96
BDNF-205ENST00000395981 WDR97A6NE52 1622 aa9.08□□□□□ -0.96
BDNF-205ENST00000395981 DNMBPQ6XZF7 1577 aa9.08□□□□□ -0.96
BDNF-205ENST00000395981 SYNJ1O43426 1573 aa9.06□□□□□ -0.96
BDNF-205ENST00000395981 PDE4CQ08493 712 aa9.05□□□□□ -0.96
BDNF-205ENST00000395981 BIVM-ERCC5R4GMW8 1640 aa9.05□□□□□ -0.96
BDNF-205ENST00000395981 ABCC8Q09428 1581 aa9.05□□□□□ -0.96
BDNF-205ENST00000395981 ZNF608Q9ULD9 1512 aaPredicted RBP9.04□□□□□ -0.96
BDNF-205ENST00000395981 POLA1P09884 1462 aaPredicted RBP9.04□□□□□ -0.96
BDNF-205ENST00000395981 TOP2BQ02880 1626 aa9.02□□□□□ -0.97
BDNF-205ENST00000395981 ARID3AQ99856 593 aa9.01□□□□□ -0.97
BDNF-205ENST00000395981 MIER1Q8N108 512 aa9□□□□□ -0.97
BDNF-205ENST00000395981 RAD54L2Q9Y4B4 1467 aa9□□□□□ -0.97
BDNF-205ENST00000395981 DHX37Q8IY37 1157 aaKnown RBP8.98□□□□□ -0.97
BDNF-205ENST00000395981 FGD5Q6ZNL6 1462 aa8.98□□□□□ -0.97
BDNF-205ENST00000395981 EIF4G3O43432 1585 aaKnown RBP8.98□□□□□ -0.97
BDNF-205ENST00000395981 TMEM132AQ24JP5 1023 aa8.97□□□□□ -0.97
BDNF-205ENST00000395981 FBXO3Q9UK99 471 aa8.97□□□□□ -0.97
BDNF-205ENST00000395981 ABCA5Q8WWZ7 1642 aa8.97□□□□□ -0.97
BDNF-205ENST00000395981 CHMP4AQ9BY43 222 aa8.96□□□□□ -0.97
BDNF-205ENST00000395981 IFT140Q96RY7 1462 aa8.95□□□□□ -0.98
BDNF-205ENST00000395981 CFAP44Q96MT7 982 aa8.94□□□□□ -0.98
BDNF-205ENST00000395981 A0A0U1RQG5 324 aaPredicted RBP8.93□□□□□ -0.98
BDNF-205ENST00000395981 ABCA10Q8WWZ4 1543 aa8.93□□□□□ -0.98
BDNF-205ENST00000395981 AQRO60306 1485 aaKnown RBP eCLIP8.93□□□□□ -0.98
BDNF-205ENST00000395981 FKBP8Q14318 412 aa8.92□□□□□ -0.98
BDNF-205ENST00000395981 WRNQ14191 1432 aaPredicted RBP eCLIP8.92□□□□□ -0.98
BDNF-205ENST00000395981 PKNOX2Q96KN3 472 aa8.91□□□□□ -0.98
BDNF-205ENST00000395981 UBE2Q2Q8WVN8 375 aa8.91□□□□□ -0.98
BDNF-205ENST00000395981 PBRM1Q86U86 1689 aa8.91□□□□□ -0.98
BDNF-205ENST00000395981 SOGA1O94964 1423 aa8.9□□□□□ -0.98
BDNF-205ENST00000395981 ANP32EQ9BTT0 268 aa8.9□□□□□ -0.99
BDNF-205ENST00000395981 CHD1O14646 1710 aa8.88□□□□□ -0.99
BDNF-205ENST00000395981 ITGAEP38570 1179 aa8.87□□□□□ -0.99
BDNF-205ENST00000395981 RTL5Q5HYW3 569 aaPredicted RBP8.87□□□□□ -0.99
BDNF-205ENST00000395981 TDRD9Q8NDG6 1382 aaKnown RBP8.87□□□□□ -0.99
BDNF-205ENST00000395981 CCDC136Q96JN2 1154 aa8.85□□□□□ -0.99
BDNF-205ENST00000395981 RUSC2Q8N2Y8 1516 aa8.85□□□□□ -0.99
BDNF-205ENST00000395981 DNAJC5Q9H3Z4 198 aa8.83□□□□□ -1
BDNF-205ENST00000395981 SUPT16HQ9Y5B9 1047 aaKnown RBP8.83□□□□□ -1
BDNF-205ENST00000395981 GAPVD1Q14C86 1478 aa8.81□□□□□ -1
BDNF-205ENST00000395981 BRD2P25440 801 aaKnown RBP8.81□□□□□ -1
BDNF-205ENST00000395981 CLASP1Q7Z460 1538 aa8.81□□□□□ -1
BDNF-205ENST00000395981 SNAPC4Q5SXM2 1469 aa8.81□□□□□ -1
BDNF-205ENST00000395981 NBR1Q14596 966 aa8.81□□□□□ -1
BDNF-205ENST00000395981 ADAMTS12P58397 1594 aa8.81□□□□□ -1
BDNF-205ENST00000395981 ERICH3Q5RHP9 1530 aa8.8□□□□□ -1
BDNF-205ENST00000395981 TAF7LQ5H9L4 462 aa8.8□□□□□ -1
BDNF-205ENST00000395981 CLSPNQ9HAW4 1339 aa8.79□□□□□ -1
BDNF-205ENST00000395981 GRIN2BQ13224 1484 aa8.79□□□□□ -1
BDNF-205ENST00000395981 CEP170Q5SW79 1584 aa8.79□□□□□ -1
BDNF-205ENST00000395981 IGF1RP08069 1367 aa8.79□□□□□ -1
BDNF-205ENST00000395981 MAGI1Q96QZ7 1491 aaPredicted RBP8.78□□□□□ -1
BDNF-205ENST00000395981 FBLN2P98095 1184 aa8.78□□□□□ -1
BDNF-205ENST00000395981 BCL11BQ9C0K0 894 aaPredicted RBP8.77□□□□□ -1.01
BDNF-205ENST00000395981 SYNJ2O15056 1496 aa8.76□□□□□ -1.01
BDNF-205ENST00000395981 SHROOM2Q13796 1616 aa8.76□□□□□ -1.01
BDNF-205ENST00000395981 HMGB1P09429 215 aaKnown RBP8.75□□□□□ -1.01
BDNF-205ENST00000395981 TSHZ2Q9NRE2 1034 aa8.75□□□□□ -1.01
BDNF-205ENST00000395981 NUP160Q12769 1436 aa8.74□□□□□ -1.01
BDNF-205ENST00000395981 ERCC6L2Q5T890 1561 aa8.74□□□□□ -1.01
BDNF-205ENST00000395981 GRIN2AQ12879 1464 aa8.73□□□□□ -1.01
BDNF-205ENST00000395981 RIMBP3CA6NJZ7 1639 aa8.72□□□□□ -1.01
BDNF-205ENST00000395981 RIMBP3BA6NNM3 1639 aa8.72□□□□□ -1.01
BDNF-205ENST00000395981 RIMBP3Q9UFD9 1639 aa8.72□□□□□ -1.01
BDNF-205ENST00000395981 VSIG10Q8N0Z9 540 aa8.72□□□□□ -1.01
BDNF-205ENST00000395981 IRX6P78412 446 aaPredicted RBP8.72□□□□□ -1.01
BDNF-205ENST00000395981 TRIM52Q96A61 297 aa8.72□□□□□ -1.01
BDNF-205ENST00000395981 MYT1LQ9UL68 1186 aa8.72□□□□□ -1.01
BDNF-205ENST00000395981 CUL7Q14999 1698 aa8.7□□□□□ -1.02
BDNF-205ENST00000395981 FHAD1B1AJZ9 1412 aa8.7□□□□□ -1.02
BDNF-205ENST00000395981 CCDC9Q9Y3X0 531 aaKnown RBP8.7□□□□□ -1.02
BDNF-205ENST00000395981 PRXQ9BXM0 1461 aa8.7□□□□□ -1.02
BDNF-205ENST00000395981 HSP90B1P14625 803 aaKnown RBP8.7□□□□□ -1.02
BDNF-205ENST00000395981 DDX10Q13206 875 aaKnown RBP8.69□□□□□ -1.02
BDNF-205ENST00000395981 ZNF526Q8TF50 670 aaPredicted RBP8.69□□□□□ -1.02
BDNF-205ENST00000395981 ARHGEF11O15085 1522 aa8.69□□□□□ -1.02
BDNF-205ENST00000395981 CNGB1Q14028 1251 aaPredicted RBP8.68□□□□□ -1.02
BDNF-205ENST00000395981 SAMD1Q6SPF0 538 aaPredicted RBP8.67□□□□□ -1.02
BDNF-205ENST00000395981 ANP32CO43423 234 aa8.67□□□□□ -1.02
BDNF-205ENST00000395981 KIF27Q86VH2 1401 aa8.67□□□□□ -1.02
BDNF-205ENST00000395981 ZNF326Q5BKZ1 582 aaKnown RBP8.67□□□□□ -1.02
BDNF-205ENST00000395981 OSCARQ8IYS5 282 aa8.67□□□□□ -1.02
BDNF-205ENST00000395981 P3H3Q8IVL6 736 aa8.66□□□□□ -1.02
BDNF-205ENST00000395981 NAP1L5Q96NT1 182 aaPredicted RBP8.66□□□□□ -1.02
BDNF-205ENST00000395981 KDM2AQ9Y2K7 1162 aa8.66□□□□□ -1.02
BDNF-205ENST00000395981 ARAP1Q96P48 1450 aa8.65□□□□□ -1.02
BDNF-205ENST00000395981 RBM19Q9Y4C8 960 aaKnown RBP8.65□□□□□ -1.02
BDNF-205ENST00000395981 CEP162Q5TB80 1403 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms