RNA–Protein interactions for RNA: ENST00000395366.2

PPP1CB-203, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 4,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-203ENST00000395366 PLEKHD1A6NEE1 506 aa20.5■□□□□ 0.87
PPP1CB-203ENST00000395366 DDX10Q13206 875 aaKnown RBP20.46■□□□□ 0.87
PPP1CB-203ENST00000395366 BICRAQ9NZM4 1560 aa20.46■□□□□ 0.87
PPP1CB-203ENST00000395366 NPM1P06748 294 aaKnown RBP eCLIP20.45■□□□□ 0.87
PPP1CB-203ENST00000395366 CFDP1Q9UEE9 299 aaPredicted RBP20.41■□□□□ 0.86
PPP1CB-203ENST00000395366 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.39■□□□□ 0.852e-7■■■□□ 17.1
PPP1CB-203ENST00000395366 KCNH8Q96L42 1107 aa20.37■□□□□ 0.85
PPP1CB-203ENST00000395366 CLSPNQ9HAW4 1339 aa20.37■□□□□ 0.85
PPP1CB-203ENST00000395366 MIER1Q8N108 512 aa20.35■□□□□ 0.85
PPP1CB-203ENST00000395366 FGD5Q6ZNL6 1462 aa20.35■□□□□ 0.85
PPP1CB-203ENST00000395366 HIRIP3Q9BW71 556 aaPredicted RBP20.34■□□□□ 0.85
PPP1CB-203ENST00000395366 FMN1Q68DA7 1419 aa20.34■□□□□ 0.85
PPP1CB-203ENST00000395366 CFTRP13569 1480 aa20.32■□□□□ 0.84
PPP1CB-203ENST00000395366 IGF1RP08069 1367 aa20.32■□□□□ 0.84
PPP1CB-203ENST00000395366 SYNJ1O43426 1573 aa20.32■□□□□ 0.84
PPP1CB-203ENST00000395366 FHOD3Q2V2M9 1422 aa20.31■□□□□ 0.84
PPP1CB-203ENST00000395366 BCL11AQ9H165 835 aa20.31■□□□□ 0.84
PPP1CB-203ENST00000395366 SIN3AQ96ST3 1273 aa20.3■□□□□ 0.84
PPP1CB-203ENST00000395366 ARHGAP35Q9NRY4 1499 aa20.3■□□□□ 0.84
PPP1CB-203ENST00000395366 HMGXB3Q12766 1538 aa20.3■□□□□ 0.84
PPP1CB-203ENST00000395366 BCANQ96GW7 911 aa20.28■□□□□ 0.84
PPP1CB-203ENST00000395366 RAD54L2Q9Y4B4 1467 aa20.25■□□□□ 0.83
PPP1CB-203ENST00000395366 KDM2AQ9Y2K7 1162 aa20.25■□□□□ 0.83
PPP1CB-203ENST00000395366 SETD5Q9C0A6 1442 aa20.23■□□□□ 0.83
PPP1CB-203ENST00000395366 UNC13AQ9UPW8 1703 aa20.22■□□□□ 0.83
PPP1CB-203ENST00000395366 CHGAP10645 457 aaKnown RBP20.21■□□□□ 0.83
PPP1CB-203ENST00000395366 EIF4G2P78344 907 aaKnown RBP eCLIP20.21■□□□□ 0.83
PPP1CB-203ENST00000395366 CC2D2AQ9P2K1 1620 aa20.19■□□□□ 0.82
PPP1CB-203ENST00000395366 CARMIL2Q6F5E8 1435 aa20.18■□□□□ 0.82
PPP1CB-203ENST00000395366 RAB3GAP2Q9H2M9 1393 aa20.16■□□□□ 0.82
PPP1CB-203ENST00000395366 KIF21BO75037 1637 aa20.16■□□□□ 0.82
PPP1CB-203ENST00000395366 SCAF1Q9H7N4 1312 aaKnown RBP20.15■□□□□ 0.82
PPP1CB-203ENST00000395366 GAPVD1Q14C86 1478 aa20.15■□□□□ 0.82
PPP1CB-203ENST00000395366 TOP2BQ02880 1626 aa20.15■□□□□ 0.82
PPP1CB-203ENST00000395366 HNRNPUQ00839 825 aaKnown RBP eCLIP20.13■□□□□ 0.81
PPP1CB-203ENST00000395366 NESP48681 1621 aa20.13■□□□□ 0.81
PPP1CB-203ENST00000395366 PEG3Q9GZU2 1588 aa20.12■□□□□ 0.81
PPP1CB-203ENST00000395366 CUX1P39880 1505 aa20.12■□□□□ 0.81
PPP1CB-203ENST00000395366 PRKCSHP14314 528 aaPredicted RBP20.11■□□□□ 0.81
PPP1CB-203ENST00000395366 FAM9BQ8IZU0 186 aa20.1■□□□□ 0.81
PPP1CB-203ENST00000395366 TIMELESSQ9UNS1 1208 aa20.09■□□□□ 0.81
PPP1CB-203ENST00000395366 ERICH3Q5RHP9 1530 aa20.08■□□□□ 0.8
PPP1CB-203ENST00000395366 RGL3Q3MIN7 710 aa20.07■□□□□ 0.8
PPP1CB-203ENST00000395366 JPH4Q96JJ6 628 aa20.07■□□□□ 0.8
PPP1CB-203ENST00000395366 ESF1Q9H501 851 aaKnown RBP20.07■□□□□ 0.8
PPP1CB-203ENST00000395366 PRXQ9BXM0 1461 aa20.06■□□□□ 0.8
PPP1CB-203ENST00000395366 STAG3Q9UJ98 1225 aa20.03■□□□□ 0.8
PPP1CB-203ENST00000395366 MRS2Q9HD23 443 aa20.02■□□□□ 0.8
PPP1CB-203ENST00000395366 FKBP8Q14318 412 aa19.99■□□□□ 0.79
PPP1CB-203ENST00000395366 TMC1Q8TDI8 760 aa19.99■□□□□ 0.79
PPP1CB-203ENST00000395366 AQRO60306 1485 aaKnown RBP eCLIP19.99■□□□□ 0.793e-8■■■■□ 22.1
PPP1CB-203ENST00000395366 ARAP1Q96P48 1450 aa19.99■□□□□ 0.79
PPP1CB-203ENST00000395366 TOPBP1Q92547 1522 aa19.99■□□□□ 0.79
PPP1CB-203ENST00000395366 DAXXQ9UER7 740 aaPredicted RBP19.96■□□□□ 0.79
PPP1CB-203ENST00000395366 CCDC18Q5T9S5 1454 aa19.96■□□□□ 0.79
PPP1CB-203ENST00000395366 DHX57Q6P158 1386 aaKnown RBP19.96■□□□□ 0.79
PPP1CB-203ENST00000395366 POLA1P09884 1462 aaPredicted RBP19.96■□□□□ 0.79
PPP1CB-203ENST00000395366 FOXD1Q16676 465 aa19.94■□□□□ 0.78
PPP1CB-203ENST00000395366 CARD11Q9BXL7 1154 aa19.94■□□□□ 0.78
PPP1CB-203ENST00000395366 MPHOSPH9Q99550 1183 aa19.93■□□□□ 0.78
PPP1CB-203ENST00000395366 PKD2Q13563 968 aa19.9■□□□□ 0.78
PPP1CB-203ENST00000395366 SALL2Q9Y467 1007 aaPredicted RBP19.88■□□□□ 0.77
PPP1CB-203ENST00000395366 DNMBPQ6XZF7 1577 aa19.87■□□□□ 0.77
PPP1CB-203ENST00000395366 DNAJC5BQ9UF47 199 aa19.87■□□□□ 0.77
PPP1CB-203ENST00000395366 LRRC9Q6ZRR7 1453 aa19.87■□□□□ 0.77
PPP1CB-203ENST00000395366 ANKRD30AQ9BXX3 1397 aa19.86■□□□□ 0.77
PPP1CB-203ENST00000395366 PPP1R15AO75807 674 aaPredicted RBP19.86■□□□□ 0.77
PPP1CB-203ENST00000395366 PHLDB1Q86UU1 1377 aa19.85■□□□□ 0.77
PPP1CB-203ENST00000395366 GRIN2BQ13224 1484 aa19.85■□□□□ 0.77
PPP1CB-203ENST00000395366 DCAF11Q8TEB1 546 aa19.84■□□□□ 0.77
PPP1CB-203ENST00000395366 CASKIN1Q8WXD9 1431 aa19.84■□□□□ 0.77
PPP1CB-203ENST00000395366 MRC2Q9UBG0 1479 aa19.84■□□□□ 0.77
PPP1CB-203ENST00000395366 PLPPR3Q6T4P5 718 aa19.84■□□□□ 0.77
PPP1CB-203ENST00000395366 NEFMP07197 916 aa19.83■□□□□ 0.76
PPP1CB-203ENST00000395366 EFCAB2Q5VUJ9 269 aa19.83■□□□□ 0.76
PPP1CB-203ENST00000395366 HNRNPMP52272 730 aaKnown RBP eCLIP19.82■□□□□ 0.761e-6■■■■□ 24.5
PPP1CB-203ENST00000395366 NUP155O75694 1391 aa19.82■□□□□ 0.76
PPP1CB-203ENST00000395366 SLC24A1O60721 1099 aa19.81■□□□□ 0.76
PPP1CB-203ENST00000395366 CANXP27824 592 aaKnown RBP19.81■□□□□ 0.76
PPP1CB-203ENST00000395366 PTPRGP23470 1445 aa19.81■□□□□ 0.76
PPP1CB-203ENST00000395366 HSPA5P11021 654 aaKnown RBP19.8■□□□□ 0.76
PPP1CB-203ENST00000395366 FGD6Q6ZV73 1430 aa19.79■□□□□ 0.76
PPP1CB-203ENST00000395366 SENP3Q9H4L4 574 aaPredicted RBP19.78■□□□□ 0.76
PPP1CB-203ENST00000395366 ABCA10Q8WWZ4 1543 aa19.77■□□□□ 0.76
PPP1CB-203ENST00000395366 LAMC3Q9Y6N6 1575 aa19.77■□□□□ 0.75
PPP1CB-203ENST00000395366 WDR43Q15061 677 aaKnown RBP eCLIP19.76■□□□□ 0.75
PPP1CB-203ENST00000395366 MYOM3Q5VTT5 1437 aa19.76■□□□□ 0.75
PPP1CB-203ENST00000395366 FYCO1Q9BQS8 1478 aa19.75■□□□□ 0.75
PPP1CB-203ENST00000395366 L3MBTL2Q969R5 705 aa19.75■□□□□ 0.75
PPP1CB-203ENST00000395366 IFT140Q96RY7 1462 aa19.74■□□□□ 0.75
PPP1CB-203ENST00000395366 RSPH4AQ5TD94 716 aa19.74■□□□□ 0.75
PPP1CB-203ENST00000395366 EFCAB5A4FU69 1503 aa19.73■□□□□ 0.75
PPP1CB-203ENST00000395366 RRBP1Q9P2E9 1410 aaKnown RBP19.73■□□□□ 0.75
PPP1CB-203ENST00000395366 KANK1Q14678 1352 aa19.72■□□□□ 0.75
PPP1CB-203ENST00000395366 CDCA8Q53HL2 280 aa19.72■□□□□ 0.75
PPP1CB-203ENST00000395366 BIVM-ERCC5R4GMW8 1640 aa19.71■□□□□ 0.75
PPP1CB-203ENST00000395366 NCOA2Q15596 1464 aa19.7■□□□□ 0.74
PPP1CB-203ENST00000395366 IRX6P78412 446 aaPredicted RBP19.69■□□□□ 0.74
PPP1CB-203ENST00000395366 ZNF644Q9H582 1327 aaPredicted RBP19.67■□□□□ 0.74
PPP1CB-203ENST00000395366 KNSTRNQ9Y448 316 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms