RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 RTN4Q9NQC3 1192 aaKnown RBP16.13■□□□□ 0.17
RAPGEF3-202ENST00000395358 DEKP35659 375 aaKnown RBP16.12■□□□□ 0.17
RAPGEF3-202ENST00000395358 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.12■□□□□ 0.17
RAPGEF3-202ENST00000395358 RAD54L2Q9Y4B4 1467 aa16.12■□□□□ 0.17
RAPGEF3-202ENST00000395358 P3H3Q8IVL6 736 aa16.12■□□□□ 0.17
RAPGEF3-202ENST00000395358 DNMBPQ6XZF7 1577 aa16.11■□□□□ 0.17
RAPGEF3-202ENST00000395358 TOP2BQ02880 1626 aa16.11■□□□□ 0.17
RAPGEF3-202ENST00000395358 FKBP8Q14318 412 aa16.1■□□□□ 0.17
RAPGEF3-202ENST00000395358 NBR1Q14596 966 aa16.09■□□□□ 0.17
RAPGEF3-202ENST00000395358 POLA1P09884 1462 aaPredicted RBP16.07■□□□□ 0.16
RAPGEF3-202ENST00000395358 SLC24A1O60721 1099 aa16.06■□□□□ 0.16
RAPGEF3-202ENST00000395358 RUSC2Q8N2Y8 1516 aa16.05■□□□□ 0.16
RAPGEF3-202ENST00000395358 CDK11AQ9UQ88 783 aaPredicted RBP16.04■□□□□ 0.16
RAPGEF3-202ENST00000395358 GAPVD1Q14C86 1478 aa16.03■□□□□ 0.16
RAPGEF3-202ENST00000395358 RBM19Q9Y4C8 960 aaKnown RBP16.03■□□□□ 0.16
RAPGEF3-202ENST00000395358 URB2Q14146 1524 aaKnown RBP16.03■□□□□ 0.16
RAPGEF3-202ENST00000395358 TNIKQ9UKE5 1360 aa16.03■□□□□ 0.16
RAPGEF3-202ENST00000395358 IFT140Q96RY7 1462 aa16.02■□□□□ 0.16
RAPGEF3-202ENST00000395358 GLIPR1L2Q4G1C9 344 aa16.02■□□□□ 0.15
RAPGEF3-202ENST00000395358 IGF1RP08069 1367 aa15.99■□□□□ 0.15
RAPGEF3-202ENST00000395358 CLIP1P30622 1438 aa15.99■□□□□ 0.15
RAPGEF3-202ENST00000395358 ITGAEP38570 1179 aa15.99■□□□□ 0.15
RAPGEF3-202ENST00000395358 AQRO60306 1485 aaKnown RBP eCLIP15.99■□□□□ 0.15
RAPGEF3-202ENST00000395358 SALL2Q9Y467 1007 aaPredicted RBP15.99■□□□□ 0.15
RAPGEF3-202ENST00000395358 RAPGEF2Q9Y4G8 1499 aa15.97■□□□□ 0.15
RAPGEF3-202ENST00000395358 CEP162Q5TB80 1403 aa15.95■□□□□ 0.14
RAPGEF3-202ENST00000395358 BIVM-ERCC5R4GMW8 1640 aa15.93■□□□□ 0.14
RAPGEF3-202ENST00000395358 GRIN2BQ13224 1484 aa15.92■□□□□ 0.14
RAPGEF3-202ENST00000395358 KIF21AQ7Z4S6 1674 aa15.92■□□□□ 0.14
RAPGEF3-202ENST00000395358 ABCA10Q8WWZ4 1543 aa15.92■□□□□ 0.14
RAPGEF3-202ENST00000395358 PRDM2Q13029 1718 aa15.92■□□□□ 0.14
RAPGEF3-202ENST00000395358 ARID3CA6NKF2 412 aa15.88■□□□□ 0.13
RAPGEF3-202ENST00000395358 ERICH6BQ5W0A0 696 aa15.88■□□□□ 0.13
RAPGEF3-202ENST00000395358 PKNOX2Q96KN3 472 aa15.87■□□□□ 0.13
RAPGEF3-202ENST00000395358 FHAD1B1AJZ9 1412 aa15.86■□□□□ 0.13
RAPGEF3-202ENST00000395358 UBE2Q2Q8WVN8 375 aa15.83■□□□□ 0.12
RAPGEF3-202ENST00000395358 WDR62O43379 1518 aa15.81■□□□□ 0.12
RAPGEF3-202ENST00000395358 NPM1P06748 294 aaKnown RBP eCLIP15.8■□□□□ 0.12
RAPGEF3-202ENST00000395358 PODXL2Q9NZ53 605 aa15.79■□□□□ 0.12
RAPGEF3-202ENST00000395358 ZNF608Q9ULD9 1512 aaPredicted RBP15.79■□□□□ 0.12
RAPGEF3-202ENST00000395358 JPH4Q96JJ6 628 aa15.79■□□□□ 0.12
RAPGEF3-202ENST00000395358 PRXQ9BXM0 1461 aa15.78■□□□□ 0.12
RAPGEF3-202ENST00000395358 CARMIL2Q6F5E8 1435 aa15.78■□□□□ 0.12
RAPGEF3-202ENST00000395358 SNAPC4Q5SXM2 1469 aa15.77■□□□□ 0.12
RAPGEF3-202ENST00000395358 OSCARQ8IYS5 282 aa15.77■□□□□ 0.11
RAPGEF3-202ENST00000395358 ERICH3Q5RHP9 1530 aa15.75■□□□□ 0.11
RAPGEF3-202ENST00000395358 KIF21BO75037 1637 aa15.75■□□□□ 0.11
RAPGEF3-202ENST00000395358 FAM50AQ14320 339 aaKnown RBP15.71■□□□□ 0.11
RAPGEF3-202ENST00000395358 ANP32AP39687 249 aaKnown RBP15.7■□□□□ 0.1
RAPGEF3-202ENST00000395358 MAGI1Q96QZ7 1491 aaPredicted RBP15.7■□□□□ 0.1
RAPGEF3-202ENST00000395358 MTUS2Q5JR59 1369 aa15.69■□□□□ 0.1
RAPGEF3-202ENST00000395358 CUL7Q14999 1698 aa15.67■□□□□ 0.1
RAPGEF3-202ENST00000395358 FMN1Q68DA7 1419 aa15.67■□□□□ 0.1
RAPGEF3-202ENST00000395358 SYNJ2O15056 1496 aa15.67■□□□□ 0.1
RAPGEF3-202ENST00000395358 VPS8Q8N3P4 1428 aa15.67■□□□□ 0.1
RAPGEF3-202ENST00000395358 PLEKHD1A6NEE1 506 aa15.66■□□□□ 0.1
RAPGEF3-202ENST00000395358 FHOD3Q2V2M9 1422 aa15.65■□□□□ 0.1
RAPGEF3-202ENST00000395358 DAXXQ9UER7 740 aaPredicted RBP15.63■□□□□ 0.09
RAPGEF3-202ENST00000395358 ZBTB47Q9UFB7 747 aaPredicted RBP15.63■□□□□ 0.09
RAPGEF3-202ENST00000395358 NOP58Q9Y2X3 529 aaKnown RBP15.63■□□□□ 0.09
RAPGEF3-202ENST00000395358 THOC2Q8NI27 1593 aaKnown RBP15.63■□□□□ 0.09
RAPGEF3-202ENST00000395358 IL27Q8NEV9 243 aa15.61■□□□□ 0.09
RAPGEF3-202ENST00000395358 VSIG10Q8N0Z9 540 aa15.61■□□□□ 0.09
RAPGEF3-202ENST00000395358 GRIN2AQ12879 1464 aa15.61■□□□□ 0.09
RAPGEF3-202ENST00000395358 IRX6P78412 446 aaPredicted RBP15.59■□□□□ 0.09
RAPGEF3-202ENST00000395358 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
RAPGEF3-202ENST00000395358 TARBP1Q13395 1621 aaKnown RBP15.59■□□□□ 0.09
RAPGEF3-202ENST00000395358 TRIM52Q96A61 297 aa15.58■□□□□ 0.09
RAPGEF3-202ENST00000395358 ZNF777Q9ULD5 760 aaPredicted RBP15.58■□□□□ 0.09
RAPGEF3-202ENST00000395358 KIAA0586Q9BVV6 1533 aa15.58■□□□□ 0.09
RAPGEF3-202ENST00000395358 EIF4G3O43432 1585 aaKnown RBP15.58■□□□□ 0.09
RAPGEF3-202ENST00000395358 PTPRGP23470 1445 aa15.58■□□□□ 0.08
RAPGEF3-202ENST00000395358 KCNH8Q96L42 1107 aa15.57■□□□□ 0.08
RAPGEF3-202ENST00000395358 TIMELESSQ9UNS1 1208 aa15.57■□□□□ 0.08
RAPGEF3-202ENST00000395358 MSH5O43196 834 aa15.55■□□□□ 0.08
RAPGEF3-202ENST00000395358 NPM2Q86SE8 214 aaKnown RBP15.55■□□□□ 0.08
RAPGEF3-202ENST00000395358 WDR97A6NE52 1622 aa15.54■□□□□ 0.08
RAPGEF3-202ENST00000395358 NEFMP07197 916 aa15.54■□□□□ 0.08
RAPGEF3-202ENST00000395358 ABCA5Q8WWZ7 1642 aa15.54■□□□□ 0.08
RAPGEF3-202ENST00000395358 PRG4Q92954 1404 aaPredicted RBP15.53■□□□□ 0.08
RAPGEF3-202ENST00000395358 FANCIQ9NVI1 1328 aa15.52■□□□□ 0.07
RAPGEF3-202ENST00000395358 A0A0U1RQG5 324 aaPredicted RBP15.51■□□□□ 0.07
RAPGEF3-202ENST00000395358 ARHGAP35Q9NRY4 1499 aa15.5■□□□□ 0.07
RAPGEF3-202ENST00000395358 IQGAP2Q13576 1575 aa15.5■□□□□ 0.07
RAPGEF3-202ENST00000395358 ADAMTS12P58397 1594 aa15.5■□□□□ 0.07
RAPGEF3-202ENST00000395358 EFCAB5A4FU69 1503 aa15.49■□□□□ 0.07
RAPGEF3-202ENST00000395358 PBRM1Q86U86 1689 aa15.47■□□□□ 0.07
RAPGEF3-202ENST00000395358 CYB5RLQ6IPT4 315 aa15.47■□□□□ 0.07
RAPGEF3-202ENST00000395358 ARAP1Q96P48 1450 aa15.46■□□□□ 0.06
RAPGEF3-202ENST00000395358 KANK4Q5T7N3 995 aaPredicted RBP15.46■□□□□ 0.06
RAPGEF3-202ENST00000395358 CFDP1Q9UEE9 299 aaPredicted RBP15.44■□□□□ 0.06
RAPGEF3-202ENST00000395358 ANP32CO43423 234 aa15.42■□□□□ 0.06
RAPGEF3-202ENST00000395358 LAS1LQ9Y4W2 734 aaKnown RBP15.42■□□□□ 0.06
RAPGEF3-202ENST00000395358 CCNB3Q8WWL7 1395 aa15.41■□□□□ 0.06
RAPGEF3-202ENST00000395358 TSPY4P0CV99 314 aa15.4■□□□□ 0.06
RAPGEF3-202ENST00000395358 TSPY10P0CW01 314 aa15.4■□□□□ 0.06
RAPGEF3-202ENST00000395358 CASKIN1Q8WXD9 1431 aa15.39■□□□□ 0.05
RAPGEF3-202ENST00000395358 NUP160Q12769 1436 aa15.37■□□□□ 0.05
RAPGEF3-202ENST00000395358 RSPH6AQ9H0K4 717 aa15.37■□□□□ 0.05
RAPGEF3-202ENST00000395358 DDX10Q13206 875 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms