RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	CARMIL1	Q5VZK9	1371 aa		14.31	□□□□□ -0.12
MITF-205	ENST00000394348	ABCA5	Q8WWZ7	1642 aa		14.3	□□□□□ -0.12
MITF-205	ENST00000394348	ARAP1	Q96P48	1450 aa		14.28	□□□□□ -0.12
MITF-205	ENST00000394348	DNAJC5B	Q9UF47	199 aa		14.28	□□□□□ -0.12
MITF-205	ENST00000394348	RAD54L2	Q9Y4B4	1467 aa		14.28	□□□□□ -0.12
MITF-205	ENST00000394348	MRC2	Q9UBG0	1479 aa		14.25	□□□□□ -0.13
MITF-205	ENST00000394348	ZEB1	P37275	1124 aa	Predicted RBP	14.24	□□□□□ -0.13
MITF-205	ENST00000394348	TARBP1	Q13395	1621 aa	Known RBP	14.23	□□□□□ -0.13
MITF-205	ENST00000394348	ARHGAP35	Q9NRY4	1499 aa		14.23	□□□□□ -0.13
MITF-205	ENST00000394348	EFCAB5	A4FU69	1503 aa		14.2	□□□□□ -0.14
MITF-205	ENST00000394348	WDR62	O43379	1518 aa		14.2	□□□□□ -0.14
MITF-205	ENST00000394348	GAPVD1	Q14C86	1478 aa		14.19	□□□□□ -0.14
MITF-205	ENST00000394348	CTTNBP2	Q8WZ74	1663 aa		14.19	□□□□□ -0.14
MITF-205	ENST00000394348	MAP3K1	Q13233	1512 aa		14.19	□□□□□ -0.14
MITF-205	ENST00000394348	APLP2	Q06481	763 aa		14.17	□□□□□ -0.14
MITF-205	ENST00000394348	IFT140	Q96RY7	1462 aa		14.14	□□□□□ -0.15
MITF-205	ENST00000394348	PPARGC1B	Q86YN6	1023 aa	Known RBP	14.14	□□□□□ -0.15
MITF-205	ENST00000394348	FHAD1	B1AJZ9	1412 aa		14.14	□□□□□ -0.15
MITF-205	ENST00000394348	PBRM1	Q86U86	1689 aa		14.14	□□□□□ -0.15
MITF-205	ENST00000394348	SLC4A1AP	Q9BWU0	796 aa	Known RBP	14.1	□□□□□ -0.15
MITF-205	ENST00000394348	AQR	O60306	1485 aa	Known RBP eCLIP	14.1	□□□□□ -0.15
MITF-205	ENST00000394348	TDRD9	Q8NDG6	1382 aa	Known RBP	14.09	□□□□□ -0.15
MITF-205	ENST00000394348	ADAMTS12	P58397	1594 aa		14.09	□□□□□ -0.15
MITF-205	ENST00000394348	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	14.09	□□□□□ -0.15
MITF-205	ENST00000394348	THOC2	Q8NI27	1593 aa	Known RBP	14.08	□□□□□ -0.16
MITF-205	ENST00000394348	GRIN2B	Q13224	1484 aa		14.07	□□□□□ -0.16
MITF-205	ENST00000394348	SAMD9	Q5K651	1589 aa		14.07	□□□□□ -0.16
MITF-205	ENST00000394348	TIAM1	Q13009	1591 aa		14.06	□□□□□ -0.16
MITF-205	ENST00000394348	CFAP43	Q8NDM7	1665 aa		14.06	□□□□□ -0.16
MITF-205	ENST00000394348	FYCO1	Q9BQS8	1478 aa		14.06	□□□□□ -0.16
MITF-205	ENST00000394348	RANGAP1	P46060	587 aa	Predicted RBP	14.03	□□□□□ -0.16
MITF-205	ENST00000394348	RRBP1	Q9P2E9	1410 aa	Known RBP	14.03	□□□□□ -0.16
MITF-205	ENST00000394348	ERCC6	Q03468	1493 aa		14.03	□□□□□ -0.16
MITF-205	ENST00000394348	PCF11	O94913	1555 aa	Known RBP	14.02	□□□□□ -0.16
MITF-205	ENST00000394348	FMN1	Q68DA7	1419 aa		14.02	□□□□□ -0.16
MITF-205	ENST00000394348	CASKIN1	Q8WXD9	1431 aa		14.02	□□□□□ -0.16
MITF-205	ENST00000394348	RNF39	Q9H2S5	420 aa		14.02	□□□□□ -0.17
MITF-205	ENST00000394348	EIF4G3	O43432	1585 aa	Known RBP	13.98	□□□□□ -0.17
MITF-205	ENST00000394348	LRRC9	Q6ZRR7	1453 aa		13.98	□□□□□ -0.17
MITF-205	ENST00000394348	IQGAP2	Q13576	1575 aa		13.97	□□□□□ -0.17
MITF-205	ENST00000394348	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.97	□□□□□ -0.17
MITF-205	ENST00000394348	SLC4A2	P04920	1241 aa		13.97	□□□□□ -0.17
MITF-205	ENST00000394348	FHOD3	Q2V2M9	1422 aa		13.97	□□□□□ -0.17
MITF-205	ENST00000394348	SNAPC4	Q5SXM2	1469 aa		13.96	□□□□□ -0.17
MITF-205	ENST00000394348	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.96	□□□□□ -0.17
MITF-205	ENST00000394348	ZNF608	Q9ULD9	1512 aa	Predicted RBP	13.95	□□□□□ -0.18
MITF-205	ENST00000394348	KANK4	Q5T7N3	995 aa	Predicted RBP	13.94	□□□□□ -0.18
MITF-205	ENST00000394348	UGGT2	Q9NYU1	1516 aa		13.94	□□□□□ -0.18
MITF-205	ENST00000394348	CCER1	Q8TC90	406 aa	Predicted RBP	13.93	□□□□□ -0.18
MITF-205	ENST00000394348	CCNB3	Q8WWL7	1395 aa		13.91	□□□□□ -0.18
MITF-205	ENST00000394348	GRIN2A	Q12879	1464 aa		13.9	□□□□□ -0.18
MITF-205	ENST00000394348	KIAA0586	Q9BVV6	1533 aa		13.9	□□□□□ -0.19
MITF-205	ENST00000394348	CCDC18	Q5T9S5	1454 aa		13.88	□□□□□ -0.19
MITF-205	ENST00000394348	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.88	□□□□□ -0.19
MITF-205	ENST00000394348	SYNJ2	O15056	1496 aa		13.87	□□□□□ -0.19
MITF-205	ENST00000394348	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
MITF-205	ENST00000394348	HECW1	Q76N89	1606 aa		13.86	□□□□□ -0.19
MITF-205	ENST00000394348	CLSPN	Q9HAW4	1339 aa		13.85	□□□□□ -0.19
MITF-205	ENST00000394348	EHBP1L1	Q8N3D4	1523 aa		13.85	□□□□□ -0.19
MITF-205	ENST00000394348		U3KPZ7	1027 aa	Predicted RBP	13.84	□□□□□ -0.19
MITF-205	ENST00000394348	C1QBP	Q07021	282 aa	Known RBP	13.83	□□□□□ -0.2
MITF-205	ENST00000394348	KIAA0556	O60303	1618 aa		13.82	□□□□□ -0.2
MITF-205	ENST00000394348	LRRIQ1	Q96JM4	1722 aa		13.82	□□□□□ -0.2
MITF-205	ENST00000394348	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.82	□□□□□ -0.2
MITF-205	ENST00000394348	P3H3	Q8IVL6	736 aa		13.82	□□□□□ -0.2
MITF-205	ENST00000394348	CACNB1	Q02641	598 aa	Predicted RBP	13.81	□□□□□ -0.2
MITF-205	ENST00000394348	PHLDB1	Q86UU1	1377 aa		13.81	□□□□□ -0.2
MITF-205	ENST00000394348	NUP160	Q12769	1436 aa		13.81	□□□□□ -0.2
MITF-205	ENST00000394348	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.79	□□□□□ -0.2
MITF-205	ENST00000394348	DISP1	Q96F81	1524 aa		13.79	□□□□□ -0.2
MITF-205	ENST00000394348	ARHGEF11	O15085	1522 aa		13.78	□□□□□ -0.2
MITF-205	ENST00000394348	CEP170	Q5SW79	1584 aa		13.78	□□□□□ -0.2
MITF-205	ENST00000394348	MTUS2	Q5JR59	1369 aa		13.76	□□□□□ -0.21
MITF-205	ENST00000394348	EPRS	P07814	1512 aa	Known RBP	13.74	□□□□□ -0.21
MITF-205	ENST00000394348	FGD6	Q6ZV73	1430 aa		13.74	□□□□□ -0.21
MITF-205	ENST00000394348	NCOA2	Q15596	1464 aa		13.74	□□□□□ -0.21
MITF-205	ENST00000394348	RAPGEF6	Q8TEU7	1601 aa		13.72	□□□□□ -0.21
MITF-205	ENST00000394348	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.72	□□□□□ -0.21
MITF-205	ENST00000394348	MYOM3	Q5VTT5	1437 aa		13.72	□□□□□ -0.21
MITF-205	ENST00000394348	DHX57	Q6P158	1386 aa	Known RBP	13.71	□□□□□ -0.21
MITF-205	ENST00000394348	FOXD4L1	Q9NU39	408 aa		13.71	□□□□□ -0.21
MITF-205	ENST00000394348	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.71	□□□□□ -0.21
MITF-205	ENST00000394348	CARMIL2	Q6F5E8	1435 aa		13.71	□□□□□ -0.22
MITF-205	ENST00000394348	MAGI3	Q5TCQ9	1506 aa		13.69	□□□□□ -0.22
MITF-205	ENST00000394348	SETD5	Q9C0A6	1442 aa		13.69	□□□□□ -0.22
MITF-205	ENST00000394348	TCOF1	Q13428	1488 aa	Known RBP	13.68	□□□□□ -0.22
MITF-205	ENST00000394348	MIA2	Q96PC5	1412 aa		13.67	□□□□□ -0.22
MITF-205	ENST00000394348	ZBTB22	O15209	634 aa		13.67	□□□□□ -0.22
MITF-205	ENST00000394348	NUP153	P49790	1475 aa	Known RBP	13.67	□□□□□ -0.22
MITF-205	ENST00000394348	PTPN23	Q9H3S7	1636 aa		13.66	□□□□□ -0.22
MITF-205	ENST00000394348	RAB3GAP2	Q9H2M9	1393 aa		13.65	□□□□□ -0.22
MITF-205	ENST00000394348	CDK13	Q14004	1512 aa	Known RBP	13.64	□□□□□ -0.23
MITF-205	ENST00000394348	AKNA	Q7Z591	1439 aa		13.63	□□□□□ -0.23
MITF-205	ENST00000394348	ADCY10	Q96PN6	1610 aa		13.62	□□□□□ -0.23
MITF-205	ENST00000394348	MYCN	P04198	464 aa	Predicted RBP	13.62	□□□□□ -0.23
MITF-205	ENST00000394348	FAM50A	Q14320	339 aa	Known RBP	13.62	□□□□□ -0.23
MITF-205	ENST00000394348	ABCA8	O94911	1581 aa		13.62	□□□□□ -0.23
MITF-205	ENST00000394348	SHROOM2	Q13796	1616 aa		13.61	□□□□□ -0.23
MITF-205	ENST00000394348	JPH4	Q96JJ6	628 aa		13.61	□□□□□ -0.23
MITF-205	ENST00000394348	HFM1	A2PYH4	1435 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms