RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 BCANQ96GW7 911 aa14.48□□□□□ -0.09
PSEN1-204ENST00000394164 FAM50AQ14320 339 aaKnown RBP14.47□□□□□ -0.09
PSEN1-204ENST00000394164 TDRD9Q8NDG6 1382 aaKnown RBP14.4□□□□□ -0.1
PSEN1-204ENST00000394164 DHX57Q6P158 1386 aaKnown RBP14.39□□□□□ -0.11
PSEN1-204ENST00000394164 CCNB3Q8WWL7 1395 aa14.39□□□□□ -0.11
PSEN1-204ENST00000394164 FHOD3Q2V2M9 1422 aa14.38□□□□□ -0.11
PSEN1-204ENST00000394164 ARID3CA6NKF2 412 aa14.36□□□□□ -0.11
PSEN1-204ENST00000394164 POLA1P09884 1462 aaPredicted RBP14.35□□□□□ -0.11
PSEN1-204ENST00000394164 PRDM2Q13029 1718 aa14.35□□□□□ -0.11
PSEN1-204ENST00000394164 TOPBP1Q92547 1522 aa14.34□□□□□ -0.11
PSEN1-204ENST00000394164 PHLDB1Q86UU1 1377 aa14.32□□□□□ -0.12
PSEN1-204ENST00000394164 RRBP1Q9P2E9 1410 aaKnown RBP14.3□□□□□ -0.12
PSEN1-204ENST00000394164 SIN3AQ96ST3 1273 aa14.29□□□□□ -0.12
PSEN1-204ENST00000394164 RAB3GAP2Q9H2M9 1393 aa14.29□□□□□ -0.12
PSEN1-204ENST00000394164 DNMBPQ6XZF7 1577 aa14.27□□□□□ -0.12
PSEN1-204ENST00000394164 PRKCSHP14314 528 aaPredicted RBP14.27□□□□□ -0.13
PSEN1-204ENST00000394164 URB2Q14146 1524 aaKnown RBP14.26□□□□□ -0.13
PSEN1-204ENST00000394164 TIAM1Q13009 1591 aa14.26□□□□□ -0.13
PSEN1-204ENST00000394164 LRRC9Q6ZRR7 1453 aa14.25□□□□□ -0.13
PSEN1-204ENST00000394164 KCNH8Q96L42 1107 aa14.25□□□□□ -0.13
PSEN1-204ENST00000394164 HIRIP3Q9BW71 556 aaPredicted RBP14.25□□□□□ -0.13
PSEN1-204ENST00000394164 FKBP8Q14318 412 aa14.24□□□□□ -0.13
PSEN1-204ENST00000394164 ABCA10Q8WWZ4 1543 aa14.24□□□□□ -0.13
PSEN1-204ENST00000394164 PCF11O94913 1555 aaKnown RBP14.23□□□□□ -0.13
PSEN1-204ENST00000394164 FHAD1B1AJZ9 1412 aa14.22□□□□□ -0.13
PSEN1-204ENST00000394164 CLSPNQ9HAW4 1339 aa14.22□□□□□ -0.13
PSEN1-204ENST00000394164 RBM19Q9Y4C8 960 aaKnown RBP14.2□□□□□ -0.14
PSEN1-204ENST00000394164 MTUS2Q5JR59 1369 aa14.18□□□□□ -0.14
PSEN1-204ENST00000394164 SETD5Q9C0A6 1442 aa14.18□□□□□ -0.14
PSEN1-204ENST00000394164 CHIC2Q9UKJ5 165 aa14.17□□□□□ -0.14
PSEN1-204ENST00000394164 GAPVD1Q14C86 1478 aa14.17□□□□□ -0.14
PSEN1-204ENST00000394164 PDS5BQ9NTI5 1447 aa14.17□□□□□ -0.14
PSEN1-204ENST00000394164 AQRO60306 1485 aaKnown RBP eCLIP14.15□□□□□ -0.14
PSEN1-204ENST00000394164 LAMC3Q9Y6N6 1575 aa14.13□□□□□ -0.15
PSEN1-204ENST00000394164 KIF21AQ7Z4S6 1674 aa14.12□□□□□ -0.15
PSEN1-204ENST00000394164 MSH5O43196 834 aa14.12□□□□□ -0.15
PSEN1-204ENST00000394164 CASKIN1Q8WXD9 1431 aa14.11□□□□□ -0.15
PSEN1-204ENST00000394164 DDX10Q13206 875 aaKnown RBP14.11□□□□□ -0.15
PSEN1-204ENST00000394164 RRP7BPQ9NSQ0 103 aa14.11□□□□□ -0.15
PSEN1-204ENST00000394164 FBLN2P98095 1184 aa14.1□□□□□ -0.15
PSEN1-204ENST00000394164 MAPKBP1O60336 1514 aa14.1□□□□□ -0.15
PSEN1-204ENST00000394164 FMN1Q68DA7 1419 aa14.09□□□□□ -0.15
PSEN1-204ENST00000394164 FYCO1Q9BQS8 1478 aa14.09□□□□□ -0.15
PSEN1-204ENST00000394164 CUL7Q14999 1698 aa14.08□□□□□ -0.16
PSEN1-204ENST00000394164 ERICH6Q7L0X2 663 aa14.07□□□□□ -0.16
PSEN1-204ENST00000394164 MAP3K1Q13233 1512 aa14.07□□□□□ -0.16
PSEN1-204ENST00000394164 CTTNBP2Q8WZ74 1663 aa14.06□□□□□ -0.16
PSEN1-204ENST00000394164 TRIM52Q96A61 297 aa14.05□□□□□ -0.16
PSEN1-204ENST00000394164 CFAP43Q8NDM7 1665 aa14.05□□□□□ -0.16
PSEN1-204ENST00000394164 FGD6Q6ZV73 1430 aa14.05□□□□□ -0.16
PSEN1-204ENST00000394164 EFCAB5A4FU69 1503 aa14.05□□□□□ -0.16
PSEN1-204ENST00000394164 NEFLP07196 543 aa14.04□□□□□ -0.16
PSEN1-204ENST00000394164 PTPRKQ15262 1439 aa14.04□□□□□ -0.16
PSEN1-204ENST00000394164 SNAPC4Q5SXM2 1469 aa14.03□□□□□ -0.16
PSEN1-204ENST00000394164 WDR97A6NE52 1622 aa14.03□□□□□ -0.16
PSEN1-204ENST00000394164 ABCA5Q8WWZ7 1642 aa14.03□□□□□ -0.16
PSEN1-204ENST00000394164 ZNF608Q9ULD9 1512 aaPredicted RBP14.01□□□□□ -0.17
PSEN1-204ENST00000394164 FOXD1Q16676 465 aa14.01□□□□□ -0.17
PSEN1-204ENST00000394164 NCOA2Q15596 1464 aa14.01□□□□□ -0.17
PSEN1-204ENST00000394164 TONSLQ96HA7 1378 aa13.98□□□□□ -0.17
PSEN1-204ENST00000394164 CCDC18Q5T9S5 1454 aa13.97□□□□□ -0.17
PSEN1-204ENST00000394164 PPP1R15AO75807 674 aaPredicted RBP13.97□□□□□ -0.17
PSEN1-204ENST00000394164 LRRIQ1Q96JM4 1722 aa13.97□□□□□ -0.17
PSEN1-204ENST00000394164 TARBP1Q13395 1621 aaKnown RBP13.97□□□□□ -0.17
PSEN1-204ENST00000394164 CDK13Q14004 1512 aaKnown RBP13.97□□□□□ -0.17
PSEN1-204ENST00000394164 IRX6P78412 446 aaPredicted RBP13.96□□□□□ -0.17
PSEN1-204ENST00000394164 GRIN2BQ13224 1484 aa13.95□□□□□ -0.18
PSEN1-204ENST00000394164 MYOM3Q5VTT5 1437 aa13.95□□□□□ -0.18
PSEN1-204ENST00000394164 ZNF644Q9H582 1327 aaPredicted RBP13.95□□□□□ -0.18
PSEN1-204ENST00000394164 MAGI3Q5TCQ9 1506 aa13.95□□□□□ -0.18
PSEN1-204ENST00000394164 ANO8Q9HCE9 1232 aaPredicted RBP13.95□□□□□ -0.18
PSEN1-204ENST00000394164 ZNF777Q9ULD5 760 aaPredicted RBP13.94□□□□□ -0.18
PSEN1-204ENST00000394164 SAMD9Q5K651 1589 aa13.93□□□□□ -0.18
PSEN1-204ENST00000394164 CHMP7Q8WUX9 453 aaPredicted RBP13.93□□□□□ -0.18
PSEN1-204ENST00000394164 MRC2Q9UBG0 1479 aa13.93□□□□□ -0.18
PSEN1-204ENST00000394164 DEKP35659 375 aaKnown RBP13.92□□□□□ -0.18
PSEN1-204ENST00000394164 ERCC6Q03468 1493 aa13.91□□□□□ -0.18
PSEN1-204ENST00000394164 NAIPQ13075 1403 aa13.9□□□□□ -0.18
PSEN1-204ENST00000394164 PBRM1Q86U86 1689 aa13.89□□□□□ -0.19
PSEN1-204ENST00000394164 IQGAP2Q13576 1575 aa13.89□□□□□ -0.19
PSEN1-204ENST00000394164 CNGB1Q14028 1251 aaPredicted RBP13.89□□□□□ -0.19
PSEN1-204ENST00000394164 HFM1A2PYH4 1435 aa13.88□□□□□ -0.19
PSEN1-204ENST00000394164 EPRSP07814 1512 aaKnown RBP13.88□□□□□ -0.19
PSEN1-204ENST00000394164 SUPT6HQ7KZ85 1726 aaKnown RBP13.87□□□□□ -0.19
PSEN1-204ENST00000394164 NBR1Q14596 966 aa13.87□□□□□ -0.19
PSEN1-204ENST00000394164 PTPN23Q9H3S7 1636 aa13.86□□□□□ -0.19
PSEN1-204ENST00000394164 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.86□□□□□ -0.19
PSEN1-204ENST00000394164 THOC2Q8NI27 1593 aaKnown RBP13.86□□□□□ -0.19
PSEN1-204ENST00000394164 UACAQ9BZF9 1416 aa13.86□□□□□ -0.19
PSEN1-204ENST00000394164 EHBP1L1Q8N3D4 1523 aa13.85□□□□□ -0.19
PSEN1-204ENST00000394164 ADAMTS12P58397 1594 aa13.85□□□□□ -0.19
PSEN1-204ENST00000394164 MPHOSPH9Q99550 1183 aa13.84□□□□□ -0.19
PSEN1-204ENST00000394164 CDK11AQ9UQ88 783 aaPredicted RBP13.84□□□□□ -0.19
PSEN1-204ENST00000394164 ANP32CO43423 234 aa13.83□□□□□ -0.19
PSEN1-204ENST00000394164 UGGT2Q9NYU1 1516 aa13.83□□□□□ -0.2
PSEN1-204ENST00000394164 CCDC136Q96JN2 1154 aa13.82□□□□□ -0.2
PSEN1-204ENST00000394164 ZNF326Q5BKZ1 582 aaKnown RBP13.82□□□□□ -0.2
PSEN1-204ENST00000394164 TIMELESSQ9UNS1 1208 aa13.81□□□□□ -0.2
PSEN1-204ENST00000394164 KDM6BO15054 1643 aa13.81□□□□□ -0.2
PSEN1-204ENST00000394164 HECW1Q76N89 1606 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms