RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 NCAPD3P42695 1498 aa25.73■■□□□ 1.71
ERCC2-201ENST00000391941 WDR97A6NE52 1622 aa25.71■■□□□ 1.71
ERCC2-201ENST00000391941 HMGXB3Q12766 1538 aa25.7■■□□□ 1.7
ERCC2-201ENST00000391941 PHLDB1Q86UU1 1377 aa25.69■■□□□ 1.7
ERCC2-201ENST00000391941 CFTRP13569 1480 aa25.68■■□□□ 1.7
ERCC2-201ENST00000391941 ANP32EQ9BTT0 268 aa25.66■■□□□ 1.7
ERCC2-201ENST00000391941 IGF1RP08069 1367 aa25.64■■□□□ 1.7
ERCC2-201ENST00000391941 SETD5Q9C0A6 1442 aa25.62■■□□□ 1.69
ERCC2-201ENST00000391941 TIAM1Q13009 1591 aa25.62■■□□□ 1.69
ERCC2-201ENST00000391941 PPP1R15AO75807 674 aaPredicted RBP25.58■■□□□ 1.69
ERCC2-201ENST00000391941 IRX6P78412 446 aaPredicted RBP25.57■■□□□ 1.68
ERCC2-201ENST00000391941 LRRC9Q6ZRR7 1453 aa25.56■■□□□ 1.68
ERCC2-201ENST00000391941 CARMIL1Q5VZK9 1371 aa25.54■■□□□ 1.68
ERCC2-201ENST00000391941 MAP3K1Q13233 1512 aa25.52■■□□□ 1.68
ERCC2-201ENST00000391941 RBM19Q9Y4C8 960 aaKnown RBP25.49■■□□□ 1.67
ERCC2-201ENST00000391941 NEFLP07196 543 aa25.47■■□□□ 1.67
ERCC2-201ENST00000391941 ANP32CO43423 234 aa25.46■■□□□ 1.67
ERCC2-201ENST00000391941 FHOD3Q2V2M9 1422 aa25.43■■□□□ 1.66
ERCC2-201ENST00000391941 FGD5Q6ZNL6 1462 aa25.41■■□□□ 1.66
ERCC2-201ENST00000391941 FHAD1B1AJZ9 1412 aa25.4■■□□□ 1.66
ERCC2-201ENST00000391941 PCF11O94913 1555 aaKnown RBP25.37■■□□□ 1.65
ERCC2-201ENST00000391941 CADPSQ9ULU8 1353 aa25.34■■□□□ 1.65
ERCC2-201ENST00000391941 TIMELESSQ9UNS1 1208 aa25.34■■□□□ 1.65
ERCC2-201ENST00000391941 HNRNPUQ00839 825 aaKnown RBP eCLIP25.32■■□□□ 1.64
ERCC2-201ENST00000391941 CFAP43Q8NDM7 1665 aa25.31■■□□□ 1.64
ERCC2-201ENST00000391941 TONSLQ96HA7 1378 aa25.31■■□□□ 1.64
ERCC2-201ENST00000391941 MSH5O43196 834 aa25.3■■□□□ 1.64
ERCC2-201ENST00000391941 BCL11AQ9H165 835 aa25.3■■□□□ 1.64
ERCC2-201ENST00000391941 PRDM2Q13029 1718 aa25.3■■□□□ 1.64
ERCC2-201ENST00000391941 CCER2I3L3R5 266 aa25.27■■□□□ 1.64
ERCC2-201ENST00000391941 CNGB1Q14028 1251 aaPredicted RBP25.25■■□□□ 1.63
ERCC2-201ENST00000391941 CHIC2Q9UKJ5 165 aa25.25■■□□□ 1.63
ERCC2-201ENST00000391941 PTPRKQ15262 1439 aa25.23■■□□□ 1.63
ERCC2-201ENST00000391941 CCDC184Q52MB2 194 aa25.23■■□□□ 1.63
ERCC2-201ENST00000391941 RAD54L2Q9Y4B4 1467 aa25.23■■□□□ 1.63
ERCC2-201ENST00000391941 ARID3CA6NKF2 412 aa25.21■■□□□ 1.63
ERCC2-201ENST00000391941 FYCO1Q9BQS8 1478 aa25.21■■□□□ 1.63
ERCC2-201ENST00000391941 SENP3-EIF4A1A0A087X0R7 540 aa25.2■■□□□ 1.63
ERCC2-201ENST00000391941 RRP7BPQ9NSQ0 103 aa25.2■■□□□ 1.62
ERCC2-201ENST00000391941 CASKIN1Q8WXD9 1431 aa25.19■■□□□ 1.62
ERCC2-201ENST00000391941 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.18■■□□□ 1.62
ERCC2-201ENST00000391941 FOXD1Q16676 465 aa25.16■■□□□ 1.62
ERCC2-201ENST00000391941 AQRO60306 1485 aaKnown RBP eCLIP25.16■■□□□ 1.629e-8■■■■■ 42.5
ERCC2-201ENST00000391941 FGD6Q6ZV73 1430 aa25.15■■□□□ 1.62
ERCC2-201ENST00000391941 CCDC18Q5T9S5 1454 aa25.14■■□□□ 1.62
ERCC2-201ENST00000391941 FANCD2Q9BXW9 1451 aa25.11■■□□□ 1.61
ERCC2-201ENST00000391941 MTUS2Q5JR59 1369 aa25.11■■□□□ 1.61
ERCC2-201ENST00000391941 EFCAB5A4FU69 1503 aa25.1■■□□□ 1.61
ERCC2-201ENST00000391941 WASHC2AQ641Q2 1341 aa25.1■■□□□ 1.61
ERCC2-201ENST00000391941 HSPA5P11021 654 aaKnown RBP25.1■■□□□ 1.61
ERCC2-201ENST00000391941 FAM9BQ8IZU0 186 aa25.08■■□□□ 1.61
ERCC2-201ENST00000391941 UACAQ9BZF9 1416 aa25.07■■□□□ 1.6
ERCC2-201ENST00000391941 HFM1A2PYH4 1435 aa25.06■■□□□ 1.6
ERCC2-201ENST00000391941 ABCA10Q8WWZ4 1543 aa25.05■■□□□ 1.6
ERCC2-201ENST00000391941 C11orf95C9JLR9 678 aaPredicted RBP25.04■■□□□ 1.6
ERCC2-201ENST00000391941 FMN1Q68DA7 1419 aa25.04■■□□□ 1.6
ERCC2-201ENST00000391941 POLA1P09884 1462 aaPredicted RBP25.04■■□□□ 1.6
ERCC2-201ENST00000391941 SNAPC4Q5SXM2 1469 aa25.02■■□□□ 1.6
ERCC2-201ENST00000391941 B4GALNT3Q6L9W6 998 aa25.02■■□□□ 1.6
ERCC2-201ENST00000391941 PTPN23Q9H3S7 1636 aa25■■□□□ 1.59
ERCC2-201ENST00000391941 NAIPQ13075 1403 aa25■■□□□ 1.59
ERCC2-201ENST00000391941 CDK11AQ9UQ88 783 aaPredicted RBP24.99■■□□□ 1.59
ERCC2-201ENST00000391941 DNMBPQ6XZF7 1577 aa24.99■■□□□ 1.59
ERCC2-201ENST00000391941 TOPBP1Q92547 1522 aa24.98■■□□□ 1.59
ERCC2-201ENST00000391941 TDRD9Q8NDG6 1382 aaKnown RBP24.95■■□□□ 1.59
ERCC2-201ENST00000391941 NESP48681 1621 aa24.95■■□□□ 1.58
ERCC2-201ENST00000391941 NCOA2Q15596 1464 aa24.95■■□□□ 1.58
ERCC2-201ENST00000391941 CTTNBP2Q8WZ74 1663 aa24.94■■□□□ 1.58
ERCC2-201ENST00000391941 KDM5BQ9UGL1 1544 aa24.94■■□□□ 1.58
ERCC2-201ENST00000391941 CC2D2AQ9P2K1 1620 aa24.94■■□□□ 1.58
ERCC2-201ENST00000391941 MYOM3Q5VTT5 1437 aa24.93■■□□□ 1.58
ERCC2-201ENST00000391941 CUL7Q14999 1698 aa24.93■■□□□ 1.58
ERCC2-201ENST00000391941 ERICH6Q7L0X2 663 aa24.91■■□□□ 1.58
ERCC2-201ENST00000391941 L3MBTL2Q969R5 705 aa24.91■■□□□ 1.58
ERCC2-201ENST00000391941 POLR3GLQ9BT43 218 aa24.91■■□□□ 1.58
ERCC2-201ENST00000391941 MRS2Q9HD23 443 aa24.89■■□□□ 1.58
ERCC2-201ENST00000391941 EIF4G2P78344 907 aaKnown RBP eCLIP24.87■■□□□ 1.574e-6■■■□□ 16
ERCC2-201ENST00000391941 LRRIQ1Q96JM4 1722 aa24.86■■□□□ 1.57
ERCC2-201ENST00000391941 GRIN2BQ13224 1484 aa24.84■■□□□ 1.57
ERCC2-201ENST00000391941 DENND4BO75064 1496 aaPredicted RBP24.83■■□□□ 1.57
ERCC2-201ENST00000391941 KDM6BO15054 1643 aa24.82■■□□□ 1.56
ERCC2-201ENST00000391941 NBPF8Q3BBV2 869 aa24.82■■□□□ 1.56
ERCC2-201ENST00000391941 MPHOSPH9Q99550 1183 aa24.81■■□□□ 1.56
ERCC2-201ENST00000391941 PRKRIP1Q9H875 184 aaPredicted RBP24.81■■□□□ 1.56
ERCC2-201ENST00000391941 SAMD9Q5K651 1589 aa24.81■■□□□ 1.56
ERCC2-201ENST00000391941 SUPT6HQ7KZ85 1726 aaKnown RBP24.79■■□□□ 1.56
ERCC2-201ENST00000391941 ZNF326Q5BKZ1 582 aaKnown RBP24.77■■□□□ 1.56
ERCC2-201ENST00000391941 PPP4R2Q9NY27 417 aa24.77■■□□□ 1.56
ERCC2-201ENST00000391941 MAGI3Q5TCQ9 1506 aa24.77■■□□□ 1.56
ERCC2-201ENST00000391941 FANCIQ9NVI1 1328 aa24.77■■□□□ 1.56
ERCC2-201ENST00000391941 EHBP1L1Q8N3D4 1523 aa24.77■■□□□ 1.56
ERCC2-201ENST00000391941 UGGT2Q9NYU1 1516 aa24.75■■□□□ 1.55
ERCC2-201ENST00000391941 DNAJC5BQ9UF47 199 aa24.74■■□□□ 1.55
ERCC2-201ENST00000391941 URB2Q14146 1524 aaKnown RBP24.73■■□□□ 1.55
ERCC2-201ENST00000391941 NBR1Q14596 966 aa24.73■■□□□ 1.55
ERCC2-201ENST00000391941 CNTLNQ9NXG0 1405 aa24.72■■□□□ 1.55
ERCC2-201ENST00000391941 ZNF644Q9H582 1327 aaPredicted RBP24.72■■□□□ 1.55
ERCC2-201ENST00000391941 GAPVD1Q14C86 1478 aa24.71■■□□□ 1.55
ERCC2-201ENST00000391941 CCDC7Q96M83 1385 aa24.71■■□□□ 1.55
ERCC2-201ENST00000391941 ARHGEF11O15085 1522 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms