RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 WDR97A6NE52 1622 aa5.07□□□□□ -1.6
TRAV39-201ENST00000390466 MAP3K1Q13233 1512 aa5.06□□□□□ -1.6
TRAV39-201ENST00000390466 KDM5BQ9UGL1 1544 aa5.05□□□□□ -1.6
TRAV39-201ENST00000390466 TIAM1Q13009 1591 aa5.04□□□□□ -1.6
TRAV39-201ENST00000390466 POLR1AO95602 1720 aaPredicted RBP5.04□□□□□ -1.6
TRAV39-201ENST00000390466 HNRNPUL2Q1KMD3 747 aaKnown RBP5.04□□□□□ -1.6
TRAV39-201ENST00000390466 ARHGAP35Q9NRY4 1499 aa5.03□□□□□ -1.6
TRAV39-201ENST00000390466 KCNH8Q96L42 1107 aa5.03□□□□□ -1.6
TRAV39-201ENST00000390466 CUX1P39880 1505 aa5.02□□□□□ -1.61
TRAV39-201ENST00000390466 ATAD2BQ9ULI0 1458 aa5.01□□□□□ -1.61
TRAV39-201ENST00000390466 LRRIQ1Q96JM4 1722 aa5.01□□□□□ -1.61
TRAV39-201ENST00000390466 UBTFP17480 764 aaKnown RBP5.01□□□□□ -1.61
TRAV39-201ENST00000390466 PCF11O94913 1555 aaKnown RBP4.99□□□□□ -1.61
TRAV39-201ENST00000390466 PPP1R15AO75807 674 aaPredicted RBP4.99□□□□□ -1.61
TRAV39-201ENST00000390466 KANK4Q5T7N3 995 aaPredicted RBP4.99□□□□□ -1.61
TRAV39-201ENST00000390466 RBM19Q9Y4C8 960 aaKnown RBP4.99□□□□□ -1.61
TRAV39-201ENST00000390466 CCNB3Q8WWL7 1395 aa4.99□□□□□ -1.61
TRAV39-201ENST00000390466 RAB3GAP2Q9H2M9 1393 aa4.99□□□□□ -1.61
TRAV39-201ENST00000390466 ABCA5Q8WWZ7 1642 aa4.98□□□□□ -1.61
TRAV39-201ENST00000390466 FANCIQ9NVI1 1328 aa4.97□□□□□ -1.61
TRAV39-201ENST00000390466 GCC2Q8IWJ2 1684 aa4.97□□□□□ -1.61
TRAV39-201ENST00000390466 PPP4R3CPQ6ZMV5 832 aa4.97□□□□□ -1.61
TRAV39-201ENST00000390466 HMGXB3Q12766 1538 aa4.97□□□□□ -1.61
TRAV39-201ENST00000390466 NCOA2Q15596 1464 aa4.96□□□□□ -1.62
TRAV39-201ENST00000390466 HECW1Q76N89 1606 aa4.96□□□□□ -1.62
TRAV39-201ENST00000390466 CTTNBP2Q8WZ74 1663 aa4.96□□□□□ -1.62
TRAV39-201ENST00000390466 NCAPD3P42695 1498 aa4.95□□□□□ -1.62
TRAV39-201ENST00000390466 LRRC9Q6ZRR7 1453 aa4.95□□□□□ -1.62
TRAV39-201ENST00000390466 PTPN23Q9H3S7 1636 aa4.95□□□□□ -1.62
TRAV39-201ENST00000390466 CCER2I3L3R5 266 aa4.95□□□□□ -1.62
TRAV39-201ENST00000390466 SETD5Q9C0A6 1442 aa4.95□□□□□ -1.62
TRAV39-201ENST00000390466 PHLDB1Q86UU1 1377 aa4.94□□□□□ -1.62
TRAV39-201ENST00000390466 PRKCSHP14314 528 aaPredicted RBP4.94□□□□□ -1.62
TRAV39-201ENST00000390466 FKBP8Q14318 412 aa4.94□□□□□ -1.62
TRAV39-201ENST00000390466 DENND4BO75064 1496 aaPredicted RBP4.94□□□□□ -1.62
TRAV39-201ENST00000390466 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.93□□□□□ -1.62
TRAV39-201ENST00000390466 DCAF8L1A6NGE4 600 aa4.93□□□□□ -1.62
TRAV39-201ENST00000390466 SP7Q8TDD2 431 aaPredicted RBP4.93□□□□□ -1.62
TRAV39-201ENST00000390466 BCANQ96GW7 911 aa4.93□□□□□ -1.62
TRAV39-201ENST00000390466 FHAD1B1AJZ9 1412 aa4.92□□□□□ -1.62
TRAV39-201ENST00000390466 HOXD11P31277 338 aaPredicted RBP4.92□□□□□ -1.62
TRAV39-201ENST00000390466 KIF21AQ7Z4S6 1674 aa4.92□□□□□ -1.62
TRAV39-201ENST00000390466 KIF27Q86VH2 1401 aa4.91□□□□□ -1.62
TRAV39-201ENST00000390466 AQRO60306 1485 aaKnown RBP eCLIP4.91□□□□□ -1.62
TRAV39-201ENST00000390466 CFTRP13569 1480 aa4.9□□□□□ -1.62
TRAV39-201ENST00000390466 SNAPC4Q5SXM2 1469 aa4.9□□□□□ -1.62
TRAV39-201ENST00000390466 FYCO1Q9BQS8 1478 aa4.9□□□□□ -1.62
TRAV39-201ENST00000390466 EFCAB5A4FU69 1503 aa4.9□□□□□ -1.63
TRAV39-201ENST00000390466 ARHGEF11O15085 1522 aa4.9□□□□□ -1.63
TRAV39-201ENST00000390466 SAMD9Q5K651 1589 aa4.9□□□□□ -1.63
TRAV39-201ENST00000390466 TIMELESSQ9UNS1 1208 aa4.89□□□□□ -1.63
TRAV39-201ENST00000390466 THOC2Q8NI27 1593 aaKnown RBP4.89□□□□□ -1.63
TRAV39-201ENST00000390466 PTPRKQ15262 1439 aa4.89□□□□□ -1.63
TRAV39-201ENST00000390466 CCDC18Q5T9S5 1454 aa4.88□□□□□ -1.63
TRAV39-201ENST00000390466 FGD5Q6ZNL6 1462 aa4.88□□□□□ -1.63
TRAV39-201ENST00000390466 KDM6BO15054 1643 aa4.88□□□□□ -1.63
TRAV39-201ENST00000390466 ITGAEP38570 1179 aa4.88□□□□□ -1.63
TRAV39-201ENST00000390466 DDX10Q13206 875 aaKnown RBP4.88□□□□□ -1.63
TRAV39-201ENST00000390466 RNF39Q9H2S5 420 aa4.88□□□□□ -1.63
TRAV39-201ENST00000390466 E9PCH4 1651 aa4.88□□□□□ -1.63
TRAV39-201ENST00000390466 VIRMAQ69YN4 1812 aaKnown RBP4.88□□□□□ -1.63
TRAV39-201ENST00000390466 HFM1A2PYH4 1435 aa4.88□□□□□ -1.63
TRAV39-201ENST00000390466 UACAQ9BZF9 1416 aa4.88□□□□□ -1.63
TRAV39-201ENST00000390466 CUL7Q14999 1698 aa4.87□□□□□ -1.63
TRAV39-201ENST00000390466 BCORL1Q5H9F3 1711 aa4.87□□□□□ -1.63
TRAV39-201ENST00000390466 APLP2Q06481 763 aa4.87□□□□□ -1.63
TRAV39-201ENST00000390466 SIN3AQ96ST3 1273 aa4.87□□□□□ -1.63
TRAV39-201ENST00000390466 SUPT6HQ7KZ85 1726 aaKnown RBP4.86□□□□□ -1.63
TRAV39-201ENST00000390466 ERICH6BQ5W0A0 696 aa4.86□□□□□ -1.63
TRAV39-201ENST00000390466 CNKSR2Q8WXI2 1034 aa4.86□□□□□ -1.63
TRAV39-201ENST00000390466 MYT1LQ9UL68 1186 aa4.86□□□□□ -1.63
TRAV39-201ENST00000390466 IGF1RP08069 1367 aa4.86□□□□□ -1.63
TRAV39-201ENST00000390466 NAIPQ13075 1403 aa4.86□□□□□ -1.63
TRAV39-201ENST00000390466 FGD6Q6ZV73 1430 aa4.86□□□□□ -1.63
TRAV39-201ENST00000390466 AKNAQ7Z591 1439 aa4.86□□□□□ -1.63
TRAV39-201ENST00000390466 CASKIN1Q8WXD9 1431 aa4.86□□□□□ -1.63
TRAV39-201ENST00000390466 CNTLNQ9NXG0 1405 aa4.86□□□□□ -1.63
TRAV39-201ENST00000390466 ERCC6Q03468 1493 aa4.86□□□□□ -1.63
TRAV39-201ENST00000390466 TEX14Q8IWB6 1497 aa4.86□□□□□ -1.63
TRAV39-201ENST00000390466 UGGT2Q9NYU1 1516 aa4.86□□□□□ -1.63
TRAV39-201ENST00000390466 TRIM52Q96A61 297 aa4.85□□□□□ -1.63
TRAV39-201ENST00000390466 RNF123Q5XPI4 1314 aa4.85□□□□□ -1.63
TRAV39-201ENST00000390466 NCOA1Q15788 1441 aa4.85□□□□□ -1.63
TRAV39-201ENST00000390466 TCOF1Q13428 1488 aaKnown RBP4.85□□□□□ -1.63
TRAV39-201ENST00000390466 MAGI3Q5TCQ9 1506 aa4.85□□□□□ -1.63
TRAV39-201ENST00000390466 EHBP1L1Q8N3D4 1523 aa4.84□□□□□ -1.63
TRAV39-201ENST00000390466 GRIN2BQ13224 1484 aa4.84□□□□□ -1.63
TRAV39-201ENST00000390466 MBD5Q9P267 1494 aa4.84□□□□□ -1.63
TRAV39-201ENST00000390466 NEFLP07196 543 aa4.84□□□□□ -1.63
TRAV39-201ENST00000390466 DEKP35659 375 aaKnown RBP4.84□□□□□ -1.63
TRAV39-201ENST00000390466 RNF216Q9NWF9 866 aaPredicted RBP4.84□□□□□ -1.63
TRAV39-201ENST00000390466 NESP48681 1621 aa4.83□□□□□ -1.64
TRAV39-201ENST00000390466 SPATA31E1Q6ZUB1 1445 aa4.83□□□□□ -1.64
TRAV39-201ENST00000390466 WASHC2AQ641Q2 1341 aa4.82□□□□□ -1.64
TRAV39-201ENST00000390466 PAK3O75914 559 aaPredicted RBP4.82□□□□□ -1.64
TRAV39-201ENST00000390466 CCDC184Q52MB2 194 aa4.82□□□□□ -1.64
TRAV39-201ENST00000390466 PPP4R2Q9NY27 417 aa4.82□□□□□ -1.64
TRAV39-201ENST00000390466 DNMBPQ6XZF7 1577 aa4.82□□□□□ -1.64
TRAV39-201ENST00000390466 ABCA10Q8WWZ4 1543 aa4.82□□□□□ -1.64
TRAV39-201ENST00000390466 FHOD3Q2V2M9 1422 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms