RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 AEBP2Q6ZN18 517 aaPredicted RBP7.69□□□□□ -1.18
TRAV39-201ENST00000390466 POTEDQ86YR6 584 aa7.69□□□□□ -1.18
TRAV39-201ENST00000390466 CHIC1Q5VXU3 224 aa7.16□□□□□ -1.26
TRAV39-201ENST00000390466 NISCHQ9Y2I1 1504 aa6.91□□□□□ -1.3
TRAV39-201ENST00000390466 SENP3Q9H4L4 574 aaPredicted RBP6.48□□□□□ -1.37
TRAV39-201ENST00000390466 PHF23Q9BUL5 403 aaPredicted RBP6.42□□□□□ -1.38
TRAV39-201ENST00000390466 FOXD1Q16676 465 aa6.11□□□□□ -1.43
TRAV39-201ENST00000390466 MYO15BQ96JP2 1530 aa6.02□□□□□ -1.45
TRAV39-201ENST00000390466 HRCP23327 699 aa5.97□□□□□ -1.45
TRAV39-201ENST00000390466 ZCCHC6Q5VYS8 1495 aaKnown RBP5.94□□□□□ -1.46
TRAV39-201ENST00000390466 MSH5O43196 834 aa5.92□□□□□ -1.46
TRAV39-201ENST00000390466 CCDC180Q9P1Z9 1646 aa5.92□□□□□ -1.46
TRAV39-201ENST00000390466 DCAF1Q9Y4B6 1507 aa5.88□□□□□ -1.47
TRAV39-201ENST00000390466 POTEHQ6S545 545 aa5.86□□□□□ -1.47
TRAV39-201ENST00000390466 CACNB1Q02641 598 aaPredicted RBP5.83□□□□□ -1.48
TRAV39-201ENST00000390466 SHROOM4Q9ULL8 1493 aa5.83□□□□□ -1.48
TRAV39-201ENST00000390466 PPARGC1BQ86YN6 1023 aaKnown RBP5.78□□□□□ -1.48
TRAV39-201ENST00000390466 SUPT5HO00267 1087 aaKnown RBP5.73□□□□□ -1.49
TRAV39-201ENST00000390466 PCGF6Q9BYE7 350 aa5.71□□□□□ -1.5
TRAV39-201ENST00000390466 PPP6R1Q9UPN7 881 aa5.69□□□□□ -1.5
TRAV39-201ENST00000390466 ABCC9O60706 1549 aa5.69□□□□□ -1.5
TRAV39-201ENST00000390466 PELP1Q8IZL8 1130 aaKnown RBP5.68□□□□□ -1.5
TRAV39-201ENST00000390466 PIAS4Q8N2W9 510 aaPredicted RBP5.66□□□□□ -1.5
TRAV39-201ENST00000390466 ADRA2BP18089 450 aa5.65□□□□□ -1.5
TRAV39-201ENST00000390466 PLPPR3Q6T4P5 718 aa5.64□□□□□ -1.51
TRAV39-201ENST00000390466 SCAF1Q9H7N4 1312 aaKnown RBP5.63□□□□□ -1.51
TRAV39-201ENST00000390466 TRIM26Q12899 539 aaPredicted RBP5.6□□□□□ -1.51
TRAV39-201ENST00000390466 EIF4G1Q04637 1599 aaKnown RBP5.59□□□□□ -1.52
TRAV39-201ENST00000390466 RB1CC1Q8TDY2 1594 aa5.58□□□□□ -1.52
TRAV39-201ENST00000390466 LOC105371045A0A1W2PR82 267 aa5.57□□□□□ -1.52
TRAV39-201ENST00000390466 ZEB1P37275 1124 aaPredicted RBP5.54□□□□□ -1.52
TRAV39-201ENST00000390466 RSF1Q96T23 1441 aaPredicted RBP5.51□□□□□ -1.53
TRAV39-201ENST00000390466 PLSCR2Q9NRY7 297 aa5.48□□□□□ -1.53
TRAV39-201ENST00000390466 ACIN1Q9UKV3 1341 aaKnown RBP5.47□□□□□ -1.53
TRAV39-201ENST00000390466 NEUROD1Q13562 356 aa5.45□□□□□ -1.54
TRAV39-201ENST00000390466 NACADO15069 1562 aa5.44□□□□□ -1.54
TRAV39-201ENST00000390466 DNAJC5BQ9UF47 199 aa5.44□□□□□ -1.54
TRAV39-201ENST00000390466 SCRIBQ14160 1630 aa5.44□□□□□ -1.54
TRAV39-201ENST00000390466 BAZ1AQ9NRL2 1556 aaPredicted RBP5.43□□□□□ -1.54
TRAV39-201ENST00000390466 WRNQ14191 1432 aaPredicted RBP eCLIP5.43□□□□□ -1.54
TRAV39-201ENST00000390466 MYT1Q01538 1121 aa5.43□□□□□ -1.54
TRAV39-201ENST00000390466 UNC13AQ9UPW8 1703 aa5.41□□□□□ -1.54
TRAV39-201ENST00000390466 WIZO95785 1651 aa5.4□□□□□ -1.55
TRAV39-201ENST00000390466 MROH2BQ7Z745 1585 aa5.39□□□□□ -1.55
TRAV39-201ENST00000390466 TRIM41Q8WV44 630 aa5.38□□□□□ -1.55
TRAV39-201ENST00000390466 CECR2Q9BXF3 1484 aa5.36□□□□□ -1.55
TRAV39-201ENST00000390466 GTF3C3Q9Y5Q9 886 aa5.35□□□□□ -1.55
TRAV39-201ENST00000390466 TOP2AP11388 1531 aaKnown RBP5.32□□□□□ -1.56
TRAV39-201ENST00000390466 SMARCA2P51531 1590 aa5.31□□□□□ -1.56
TRAV39-201ENST00000390466 ABCC8Q09428 1581 aa5.31□□□□□ -1.56
TRAV39-201ENST00000390466 CEP162Q5TB80 1403 aa5.31□□□□□ -1.56
TRAV39-201ENST00000390466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.3□□□□□ -1.56
TRAV39-201ENST00000390466 DIEXFQ68CQ4 756 aaKnown RBP5.3□□□□□ -1.56
TRAV39-201ENST00000390466 KIF21BO75037 1637 aa5.3□□□□□ -1.56
TRAV39-201ENST00000390466 CENPBP07199 599 aaPredicted RBP5.29□□□□□ -1.56
TRAV39-201ENST00000390466 CCDC88BA6NC98 1476 aa5.28□□□□□ -1.56
TRAV39-201ENST00000390466 TNIKQ9UKE5 1360 aa5.28□□□□□ -1.56
TRAV39-201ENST00000390466 SMARCA4P51532 1647 aa5.27□□□□□ -1.57
TRAV39-201ENST00000390466 DCAF8L2P0C7V8 631 aa5.26□□□□□ -1.57
TRAV39-201ENST00000390466 FAM9AQ8IZU1 332 aaPredicted RBP5.26□□□□□ -1.57
TRAV39-201ENST00000390466 EEA1Q15075 1411 aa5.24□□□□□ -1.57
TRAV39-201ENST00000390466 ZNF316A6NFI3 1004 aaPredicted RBP5.24□□□□□ -1.57
TRAV39-201ENST00000390466 CCER1Q8TC90 406 aaPredicted RBP5.24□□□□□ -1.57
TRAV39-201ENST00000390466 RUSC2Q8N2Y8 1516 aa5.23□□□□□ -1.57
TRAV39-201ENST00000390466 MAPK8IP2Q13387 824 aaPredicted RBP5.23□□□□□ -1.57
TRAV39-201ENST00000390466 SOGA1O94964 1423 aa5.23□□□□□ -1.57
TRAV39-201ENST00000390466 GOLGA3Q08378 1498 aa5.22□□□□□ -1.57
TRAV39-201ENST00000390466 PABPN1Q86U42 306 aaKnown RBP eCLIP5.22□□□□□ -1.57
TRAV39-201ENST00000390466 SYNJ1O43426 1573 aa5.21□□□□□ -1.57
TRAV39-201ENST00000390466 PEG3Q9GZU2 1588 aa5.21□□□□□ -1.57
TRAV39-201ENST00000390466 MIER1Q8N108 512 aa5.21□□□□□ -1.58
TRAV39-201ENST00000390466 BICRAQ9NZM4 1560 aa5.21□□□□□ -1.58
TRAV39-201ENST00000390466 CUX2O14529 1486 aa5.2□□□□□ -1.58
TRAV39-201ENST00000390466 CLSPNQ9HAW4 1339 aa5.2□□□□□ -1.58
TRAV39-201ENST00000390466 BAZ1BQ9UIG0 1483 aaKnown RBP5.2□□□□□ -1.58
TRAV39-201ENST00000390466 VPS8Q8N3P4 1428 aa5.18□□□□□ -1.58
TRAV39-201ENST00000390466 CLIP1P30622 1438 aa5.17□□□□□ -1.58
TRAV39-201ENST00000390466 BIVM-ERCC5R4GMW8 1640 aa5.17□□□□□ -1.58
TRAV39-201ENST00000390466 TSHZ2Q9NRE2 1034 aa5.17□□□□□ -1.58
TRAV39-201ENST00000390466 CEP164Q9UPV0 1460 aa5.17□□□□□ -1.58
TRAV39-201ENST00000390466 DHX57Q6P158 1386 aaKnown RBP5.16□□□□□ -1.58
TRAV39-201ENST00000390466 SUPT16HQ9Y5B9 1047 aaKnown RBP5.16□□□□□ -1.58
TRAV39-201ENST00000390466 DMRT2Q9Y5R5 561 aa5.15□□□□□ -1.59
TRAV39-201ENST00000390466 TTBK1Q5TCY1 1321 aaPredicted RBP5.15□□□□□ -1.59
TRAV39-201ENST00000390466 ARAP1Q96P48 1450 aa5.14□□□□□ -1.59
TRAV39-201ENST00000390466 MAPKBP1O60336 1514 aa5.14□□□□□ -1.59
TRAV39-201ENST00000390466 ERICH3Q5RHP9 1530 aa5.14□□□□□ -1.59
TRAV39-201ENST00000390466 EHMT2Q96KQ7 1210 aa5.14□□□□□ -1.59
TRAV39-201ENST00000390466 CC2D2AQ9P2K1 1620 aa5.14□□□□□ -1.59
TRAV39-201ENST00000390466 RRBP1Q9P2E9 1410 aaKnown RBP5.14□□□□□ -1.59
TRAV39-201ENST00000390466 TOP2BQ02880 1626 aa5.13□□□□□ -1.59
TRAV39-201ENST00000390466 ANP32EQ9BTT0 268 aa5.13□□□□□ -1.59
TRAV39-201ENST00000390466 BCL11AQ9H165 835 aa5.13□□□□□ -1.59
TRAV39-201ENST00000390466 YTHDC1Q96MU7 727 aaKnown RBP5.12□□□□□ -1.59
TRAV39-201ENST00000390466 RAPGEF2Q9Y4G8 1499 aa5.12□□□□□ -1.59
TRAV39-201ENST00000390466 CSRNP3Q8WYN3 585 aa5.11□□□□□ -1.59
TRAV39-201ENST00000390466 PRDM2Q13029 1718 aa5.1□□□□□ -1.59
TRAV39-201ENST00000390466 CFAP43Q8NDM7 1665 aa5.1□□□□□ -1.59
TRAV39-201ENST00000390466 PRXQ9BXM0 1461 aa5.09□□□□□ -1.59
TRAV39-201ENST00000390466 DNAJC5Q9H3Z4 198 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms